IDbSV - International Database of SARS-CoV-2 Variants

Abstract

Ending COVID-19 pandemic requires a collaborative understanding of SARS-CoV-2 and COVID-19 mechanisms. Yet, the evolving nature of coronaviruses results in a continuous emergence of new variants of the virus. Central to this is the need for a continuous monitoring system able to detect potentially harmful variants of the virus in real-time. In this manuscript, we present the International Database of SARS-CoV-2 Variations (IDbSV), the result of ongoing efforts in curating, analyzing, and sharing comprehensive interpretation of SARS-CoV-2’s genetic variations and variants.
Through user-friendly interactive data visualizations, we aim to provide a novel surveillance tool to the scientific and public health communities. The database is regularly updated with new records through a 4-step workflow (1- Quality control of curated sequences, 2- Call of variations, 3- Functional annotation, and 4- Metadata association).
To the best of our knowledge, IDbSV provides access to the largest repository of SARS-CoV-2 variations and the largest analysis of SARS-CoV-2 genomes with over 60 thousand annotated variations curated from the 1.808.613 genomes alongside their functional annotations, first known appearance, and associated genetic lineages, enabling a robust interpretation tool for SARS-CoV-2 variations to help understanding SARS-CoV-2 dynamics across the world.

SHOW DATABASE

Tutorial

IDbSV provides a robust monitoring tool for SARS-CoV-2 evolution in real-time to support public health decision-making and we engage in updating the database with new variants as long as more SARS-CoV-2 sequences are generated around the world.

Users can browse the database mainly using three search tools:

Reference Nucleotide

Nucleotide Alteration

Genomic Position (1-30521)

Amino Acid position in the gene

Reference

Alteration (Change)

Gene

Position in the Gene

SARS-CoV-2 most frequent Variations

Browse manually the Database.

Note: Only a maximum of 500 variations are shown here, but you can browse all variations using the specific search queries described above.

Nt. Reference	Nt. Alteration	Position in the Genome	Gene	Nucleotide Mutation	Amino Acid Mutation	Action
A	G	1080	ORF1ab	1080A>G	p.Asn272Ser	View
C	T	3037	ORF1ab	3037C>T	p.Phe924Phe	View
C	T	7165	ORF1ab	7165C>T	p.Thr2300Thr	View
C	T	7735	ORF1ab	7735C>T	p.Ile2490Ile	View
C	T	10776	ORF1ab	10776C>T	p.Pro3504Leu	View
C	T	14408	ORF1ab	14408C>T	p.Pro4715Leu	View
T	C	14610	ORF1ab	14610T>C	p.Asp4782Asp	View
T	C	15624	ORF1ab	15624T>C	p.Tyr5120Tyr	View
C	T	18788	ORF1ab	18788C>T	p.Thr6175Ile	View
A	G	23403	S	23403A>G	p.Asp614Gly	View
C	A	23591	S	23591C>A	p.Gln677Lys	View
G	T	25563	ORF3a	25563G>T	p.Gln57His	View
G	T	25912	ORF3a	25912G>T	p.Gly174Cys	View
G	T	26775	M	26775G>T	p.Ala85Ser	View
G	A	28881	N	28881G>A	p.Arg203Lys	View
G	A	28882	N	28882G>A	p.Arg203Arg	View
G	C	28883	N	28883G>C	p.Gly204Arg	View
G	T	29425	N	29425G>T	p.Gln384His	View
C	T	913	ORF1ab	913C>T	p.Ser216Ser	View
C	T	3267	ORF1ab	3267C>T	p.Thr1001Ile	View
C	T	4900	ORF1ab	4900C>T	p.His1545His	View
C	A	5388	ORF1ab	5388C>A	p.Ala1708Asp	View
C	T	5986	ORF1ab	5986C>T	p.Phe1907Phe	View
T	C	6954	ORF1ab	6954T>C	p.Ile2230Thr	View
A	G	12162	ORF1ab	12162A>G	p.Gln3966Arg	View
A	G	12187	ORF1ab	12187A>G	p.Glu3974Glu	View
C	T	14676	ORF1ab	14676C>T	p.Pro4804Pro	View
C	T	15279	ORF1ab	15279C>T	p.His5005His	View
C	T	15720	ORF1ab	15720C>T	p.Asp5152Asp	View
T	C	16176	ORF1ab	16176T>C	p.Thr5304Thr	View
A	G	16474	ORF1ab	16474A>G	p.Ser5404Gly	View
A	G	16534	ORF1ab	16534A>G	p.Ser5424Gly	View
A	G	17615	ORF1ab	17615A>G	p.Lys5784Arg	View
C	T	21077	ORF1ab	21077C>T	p.Thr6938Ile	View
A	G	21137	ORF1ab	21137A>G	p.Lys6958Arg	View
A	T	23063	S	23063A>T	p.Asn501Tyr	View
C	A	23271	S	23271C>A	p.Ala570Asp	View
C	A	23604	S	23604C>A	p.Pro681His	View
C	T	23709	S	23709C>T	p.Thr716Ile	View
T	G	24506	S	24506T>G	p.Ser982Ala	View
G	C	24914	S	24914G>C	p.Asp1118His	View
G	T	25135	S	25135G>T	p.Lys1191Asn	View
C	T	27972	ORF8	27972C>T	p.Gln27*	View
G	T	28048	ORF8	28048G>T	p.Arg52Ile	View
A	G	28111	ORF8	28111A>G	p.Tyr73Cys	View
G	C	28280	N	28280G>C	p.Asp3His	View
A	T	28281	N	28281A>T	p.Asp3Val	View
T	A	28282	N	28282T>A	p.Asp3Glu	View
C	T	28977	N	28977C>T	p.Ser235Phe	View
C	T	1150	ORF1ab	1150C>T	p.Gly295Gly	View
C	T	9924	ORF1ab	9924C>T	p.Ala3220Val	View
C	T	15738	ORF1ab	15738C>T	p.Phe5158Phe	View
A	G	20268	ORF1ab	20268A>G	p.Leu6668Leu	View
G	T	25269	S	25269G>T	p.Cys1236Phe	View
A	C	1830	ORF1ab	1830A>C	p.Asn522Thr	View
C	T	2113	ORF1ab	2113C>T	p.Ile616Ile	View
C	T	4084	ORF1ab	4084C>T	p.Asp1273Asp	View
C	T	7765	ORF1ab	7765C>T	p.Ser2500Ser	View
C	T	8139	ORF1ab	8139C>T	p.Ser2625Phe	View
C	T	17690	ORF1ab	17690C>T	p.Ser5809Leu	View
C	T	18877	ORF1ab	18877C>T	p.Leu6205Leu	View
G	T	24812	S	24812G>T	p.Asp1084Tyr	View
G	T	2173	ORF1ab	2173G>T	p.Lys636Asn	View
A	G	10236	ORF1ab	10236A>G	p.Lys3324Arg	View
T	C	18417	ORF1ab	18417T>C	p.Asp6051Asp	View
C	T	26735	M	26735C>T	p.Tyr71Tyr	View
C	T	1263	ORF1ab	1263C>T	p.Thr333Met	View
C	T	12970	ORF1ab	12970C>T	p.Asn4235Asn	View
G	T	839	ORF1ab	839G>T	p.Gly192Cys	View
A	G	1662	ORF1ab	1662A>G	p.Asp466Gly	View
G	T	5194	ORF1ab	5194G>T	p.Leu1643Leu	View
C	T	27005	M	27005C>T	p.Ile161Ile	View
C	T	222	ORF1ab	222C>T		View
C	T	1190	ORF1ab	1190C>T	p.Pro309Ser	View
A	G	3215	ORF1ab	3215A>G	p.Ser984Gly	View
G	A	3302	ORF1ab	3302G>A	p.Glu1013Lys	View
C	T	4002	ORF1ab	4002C>T	p.Thr1246Ile	View
C	T	5007	ORF1ab	5007C>T	p.Thr1581Met	View
G	A	6337	ORF1ab	6337G>A	p.Ser2024Ser	View
C	T	9693	ORF1ab	9693C>T	p.Ala3143Val	View
G	A	10097	ORF1ab	10097G>A	p.Gly3278Ser	View
C	T	10765	ORF1ab	10765C>T	p.Tyr3500Tyr	View
C	T	11758	ORF1ab	11758C>T	p.Pro3831Pro	View
C	T	12789	ORF1ab	12789C>T	p.Thr4175Ile	View
A	G	13396	ORF1ab	13396A>G	p.Lys4377Lys	View
C	T	13536	ORF1ab	13536C>T	p.Tyr4424Tyr	View
C	T	17502	ORF1ab	17502C>T	p.Phe5746Phe	View
C	T	20133	ORF1ab	20133C>T	p.Ala6623Ala	View
T	G	22917	S	22917T>G	p.Leu452Arg	View
C	T	23277	S	23277C>T	p.Thr572Ile	View
C	T	23731	S	23731C>T	p.Thr723Thr	View
T	C	27895	ORF8	27895T>C	p.Met1?	View
G	T	29422	N	29422G>T	p.Pro383Pro	View
C	T	29733	S	29733C>T		View
G	A	1821	ORF1ab	1821G>A	p.Gly519Asp	View
C	T	25680	ORF3a	25680C>T	p.Leu96Leu	View
G	C	25906	ORF3a	25906G>C	p.Gly172Arg	View
G	T	3871	ORF1ab	3871G>T	p.Lys1202Asn	View
T	A	25268	S	25268T>A	p.Cys1236Ser	View
C	T	5526	ORF1ab	5526C>T	p.Thr1754Ile	View
C	T	1457	ORF1ab	1457C>T	p.Arg398Cys	View
A	G	1818	ORF1ab	1818A>G	p.Lys518Arg	View
C	T	1853	ORF1ab	1853C>T	p.Leu530Leu	View
G	A	28580	N	28580G>A	p.Asp103Asn	View
A	G	2589	ORF1ab	2589A>G	p.Glu775Gly	View
C	T	25584	ORF3a	25584C>T	p.Thr64Thr	View
A	C	4108	ORF1ab	4108A>C	p.Lys1281Asn	View
C	T	4893	ORF1ab	4893C>T	p.Thr1543Ile	View
G	T	5230	ORF1ab	5230G>T	p.Lys1655Asn	View
C	T	12924	ORF1ab	12924C>T	p.Pro4220Leu	View
A	G	17724	ORF1ab	17724A>G	p.Val5820Val	View
A	G	20761	ORF1ab	20761A>G	p.Thr6833Ala	View
G	C	21974	S	21974G>C	p.Asp138His	View
C	A	23802	S	23802C>A	p.Thr747Asn	View
A	C	28117	ORF8	28117A>C	p.Asp75Ala	View
C	T	28697	N	28697C>T	p.Pro142Ser	View
G	T	28985	N	28985G>T	p.Gly238Cys	View
G	T	29332	N	29332G>T	p.Leu353Leu	View
T	C	29629	ORF10	29629T>C	p.Arg24Arg	View
G	A	4508	ORF1ab	4508G>A	p.Val1415Met	View
T	C	8156	ORF1ab	8156T>C	p.Ser2631Pro	View
A	G	16135	ORF1ab	16135A>G	p.Met5291Val	View
C	T	21714	S	21714C>T	p.Thr51Ile	View
G	T	3638	ORF1ab	3638G>T	p.Gly1125Cys	View
G	A	713	ORF1ab	713G>A	p.Gly150Ser	View
C	T	1059	ORF1ab	1059C>T	p.Thr265Ile	View
G	T	2210	ORF1ab	2210G>T	p.Val649Phe	View
C	T	3411	ORF1ab	3411C>T	p.Ala1049Val	View
A	G	5802	ORF1ab	5802A>G	p.Tyr1846Cys	View
C	T	5826	ORF1ab	5826C>T	p.Thr1854Ile	View
G	T	7756	ORF1ab	7756G>T	p.Lys2497Asn	View
C	T	8818	ORF1ab	8818C>T	p.Cys2851Cys	View
C	T	9214	ORF1ab	9214C>T	p.Tyr2983Tyr	View
T	C	10153	ORF1ab	10153T>C	p.Asp3296Asp	View
T	G	10285	ORF1ab	10285T>G	p.Val3340Val	View
C	T	10889	ORF1ab	10889C>T	p.Arg3542Cys	View
C	T	13252	ORF1ab	13252C>T	p.Tyr4329Tyr	View
T	C	13389	ORF1ab	13389T>C	p.Met4375Thr	View
C	T	22264	S	22264C>T	p.Asn234Asn	View
G	A	23012	S	23012G>A	p.Glu484Lys	View
A	C	23064	S	23064A>C	p.Asn501Thr	View
C	T	25821	ORF3a	25821C>T	p.Ala143Ala	View
C	T	25904	ORF3a	25904C>T	p.Ser171Leu	View
A	C	28211	ORF8	28211A>C	p.Glu106Asp	View
G	T	28280	N	28280G>T	p.Asp3Tyr	View
C	T	28887	N	28887C>T	p.Thr205Ile	View
G	T	29449	N	29449G>T	p.Val392Val	View
C	T	1734	ORF1ab	1734C>T	p.Thr490Ile	View
G	T	7675	ORF1ab	7675G>T	p.Ala2470Ala	View
C	T	4575	ORF1ab	4575C>T	p.Thr1437Ile	View
C	T	4927	ORF1ab	4927C>T	p.Asp1554Asp	View
G	T	5716	ORF1ab	5716G>T	p.Lys1817Asn	View
C	T	7600	ORF1ab	7600C>T	p.Cys2445Cys	View
C	T	10818	ORF1ab	10818C>T	p.Ala3518Val	View
C	T	14117	ORF1ab	14117C>T	p.Thr4618Met	View
C	T	15185	ORF1ab	15185C>T	p.Thr4974Ile	View
T	C	16348	ORF1ab	16348T>C	p.Ser5362Pro	View
C	T	17733	ORF1ab	17733C>T	p.Phe5823Phe	View
C	T	21614	S	21614C>T	p.Leu18Phe	View
A	C	22107	S	22107A>C	p.Lys182Thr	View
C	T	22591	S	22591C>T	p.Asn343Asn	View
G	T	23608	S	23608G>T	p.Arg682Arg	View
A	G	23914	S	23914A>G	p.Gln784Gln	View
G	T	24368	S	24368G>T	p.Asp936Tyr	View
C	T	24916	S	24916C>T	p.Asp1118Asp	View
T	A	25496	ORF3a	25496T>A	p.Ile35Lys	View
C	T	25521	ORF3a	25521C>T	p.Phe43Phe	View
G	T	25690	ORF3a	25690G>T	p.Gly100Cys	View
G	A	28248	ORF8	28248G>A	p.Asp119Asn	View
A	G	28271	N	28271A>G		View
A	G	1982	ORF1ab	1982A>G	p.Ile573Val	View
T	C	13737	ORF1ab	13737T>C	p.His4491His	View
A	G	18222	ORF1ab	18222A>G	p.Lys5986Lys	View
T	C	20454	ORF1ab	20454T>C	p.Tyr6730Tyr	View
A	G	21127	ORF1ab	21127A>G	p.Ile6955Val	View
G	T	26227	E	26227G>T		View
C	T	29708	S	29708C>T		View
A	G	10323	ORF1ab	10323A>G	p.Lys3353Arg	View
G	T	16914	ORF1ab	16914G>T	p.Val5550Val	View
G	T	1006	ORF1ab	1006G>T	p.Lys247Asn	View
C	T	1498	ORF1ab	1498C>T	p.Phe411Phe	View
A	G	1807	ORF1ab	1807A>G	p.Gly514Gly	View
G	A	2659	ORF1ab	2659G>A	p.Lys798Lys	View
C	T	6285	ORF1ab	6285C>T	p.Thr2007Ile	View
T	C	8593	ORF1ab	8593T>C	p.Val2776Val	View
C	T	9565	ORF1ab	9565C>T	p.Phe3100Phe	View
C	T	14407	ORF1ab	14407C>T	p.Pro4715Ser	View
T	C	15684	ORF1ab	15684T>C	p.Tyr5140Tyr	View
C	T	18171	ORF1ab	18171C>T	p.Gly5969Gly	View
A	G	20724	ORF1ab	20724A>G	p.Leu6820Leu	View
A	G	21717	S	21717A>G	p.Gln52Arg	View
C	T	21762	S	21762C>T	p.Ala67Val	View
A	T	22012	S	22012A>T	p.Lys150Asn	View
G	T	22484	S	22484G>T	p.Val308Leu	View
G	C	23593	S	23593G>C	p.Gln677His	View
T	C	24224	S	24224T>C	p.Phe888Leu	View
C	T	24748	S	24748C>T	p.Phe1062Phe	View
C	T	26305	E	26305C>T	p.Leu21Phe	View
T	C	26767	M	26767T>C	p.Ile82Thr	View
GTTT	G	27204	ORF6	27204GTTT>G	p.Phe2del	View
TCTG	T	28277	N	28277TCTG>T	p.Ser2_Asp3delinsTyr	View
C	G	28308	N	28308C>G	p.Ala12Gly	View
A	G	28699	N	28699A>G	p.Pro142Pro	View
G	T	29543	ORF10	29543G>T		View
G	T	3259	ORF1ab	3259G>T	p.Gln998His	View
G	T	5206	ORF1ab	5206G>T	p.Met1647Ile	View
A	G	10108	ORF1ab	10108A>G	p.Val3281Val	View
T	G	10583	ORF1ab	10583T>G	p.Leu3440Val	View
G	T	11083	ORF1ab	11083G>T	p.Leu3606Phe	View
G	T	15327	ORF1ab	15327G>T	p.Met5021Ile	View
T	A	18438	ORF1ab	18438T>A	p.Phe6058Leu	View
T	C	19299	ORF1ab	19299T>C	p.Tyr6345Tyr	View
C	T	22444	S	22444C>T	p.Asp294Asp	View
G	A	22468	S	22468G>A	p.Thr302Thr	View
G	T	23593	S	23593G>T	p.Gln677His	View
C	T	24912	S	24912C>T	p.Thr1117Ile	View
C	T	26028	ORF3a	26028C>T	p.Tyr212Tyr	View
G	T	26690	M	26690G>T	p.Leu56Leu	View
C	T	27247	ORF6	27247C>T	p.Leu16Leu	View
C	T	28854	N	28854C>T	p.Ser194Leu	View
C	A	4455	ORF1ab	4455C>A	p.Ala1397Asp	View
C	T	5284	ORF1ab	5284C>T	p.Asn1673Asn	View
G	A	8422	ORF1ab	8422G>A	p.Met2719Ile	View
G	T	28739	N	28739G>T	p.Ala156Ser	View
G	T	2072	ORF1ab	2072G>T	p.Gly603Cys	View
A	C	3933	ORF1ab	3933A>C	p.Glu1223Ala	View
C	T	11750	ORF1ab	11750C>T	p.Leu3829Phe	View
A	G	11782	ORF1ab	11782A>G	p.Lys3839Lys	View
C	T	214	ORF1ab	214C>T		View
C	T	2221	ORF1ab	2221C>T	p.Ile652Ile	View
C	T	2536	ORF1ab	2536C>T	p.Val757Val	View
G	A	3345	ORF1ab	3345G>A	p.Ser1027Asn	View
C	T	15579	ORF1ab	15579C>T	p.Asn5105Asn	View
C	T	5144	ORF1ab	5144C>T	p.Leu1627Leu	View
T	C	7264	ORF1ab	7264T>C	p.Leu2333Leu	View
C	T	7764	ORF1ab	7764C>T	p.Ser2500Phe	View
C	T	10279	ORF1ab	10279C>T	p.Leu3338Leu	View
C	T	10582	ORF1ab	10582C>T	p.Asp3439Asp	View
G	T	10870	ORF1ab	10870G>T	p.Leu3535Leu	View
C	T	12367	ORF1ab	12367C>T	p.Phe4034Phe	View
G	T	24236	S	24236G>T	p.Ala892Ser	View
C	T	27804	ORF7b	27804C>T	p.Leu17Leu	View
C	A	28830	N	28830C>A	p.Ser186Tyr	View
C	T	29466	N	29466C>T	p.Ala398Val	View
C	T	5654	ORF1ab	5654C>T	p.Leu1797Leu	View
G	T	12070	ORF1ab	12070G>T	p.Leu3935Leu	View
C	T	14267	ORF1ab	14267C>T	p.Thr4668Met	View
T	C	19839	ORF1ab	19839T>C	p.Asn6525Asn	View
G	C	26501	M	26501G>C		View
T	G	29023	N	29023T>G	p.Ser250Ser	View
C	T	13335	ORF1ab	13335C>T	p.Ala4357Val	View
C	T	24937	S	24937C>T	p.Asn1125Asn	View
G	T	25599	ORF3a	25599G>T	p.Trp69Cys	View
A	G	27965	ORF8	27965A>G	p.Ser24Ser	View
C	T	601	ORF1ab	601C>T	p.Gly112Gly	View
C	T	6255	ORF1ab	6255C>T	p.Ala1997Val	View
C	T	8290	ORF1ab	8290C>T	p.Leu2675Leu	View
A	G	13693	ORF1ab	13693A>G	p.Thr4477Ala	View
C	T	13829	ORF1ab	13829C>T	p.Ala4522Val	View
C	T	25511	ORF3a	25511C>T	p.Ser40Leu	View
C	T	29025	N	29025C>T	p.Ala251Val	View
G	T	174	ORF1ab	174G>T		View
A	T	2692	ORF1ab	2692A>T	p.Thr809Thr	View
A	C	21801	S	21801A>C	p.Asp80Ala	View
A	G	22206	S	22206A>G	p.Asp215Gly	View
G	T	22813	S	22813G>T	p.Lys417Asn	View
C	T	23664	S	23664C>T	p.Ala701Val	View
C	T	26456	E	26456C>T	p.Pro71Leu	View
C	T	28253	ORF8	28253C>T	p.Phe120Phe	View
T	C	28888	N	28888T>C	p.Thr205Thr	View
C	T	8078	ORF1ab	8078C>T	p.Pro2605Ser	View
C	T	11916	ORF1ab	11916C>T	p.Ser3884Leu	View
C	T	18998	ORF1ab	18998C>T	p.Ala6245Val	View
C	T	28863	N	28863C>T	p.Ser197Leu	View
G	A	29540	ORF10	29540G>A		View
G	A	18972	ORF1ab	18972G>A	p.Lys6236Lys	View
G	A	2577	ORF1ab	2577G>A	p.Ser771Asn	View
C	T	14120	ORF1ab	14120C>T	p.Pro4619Leu	View
G	T	20060	ORF1ab	20060G>T	p.Ser6599Ile	View
G	T	23438	S	23438G>T	p.Ala626Ser	View
C	T	25047	S	25047C>T	p.Pro1162Leu	View
G	C	29543	ORF10	29543G>C		View
C	T	1859	ORF1ab	1859C>T	p.Pro532Ser	View
T	C	14643	ORF1ab	14643T>C	p.Leu4793Leu	View
G	T	18985	ORF1ab	18985G>T	p.Val6241Phe	View
C	T	23058	S	23058C>T	p.Pro499Leu	View
C	T	27286	ORF6	27286C>T	p.Leu29Phe	View
G	T	28077	ORF8	28077G>T	p.Val62Leu	View
C	T	29541	ORF10	29541C>T		View
C	A	3429	ORF1ab	3429C>A	p.Thr1055Lys	View
C	T	11572	ORF1ab	11572C>T	p.Phe3769Phe	View
C	T	19032	ORF1ab	19032C>T	p.Asp6256Asp	View
T	C	20281	ORF1ab	20281T>C	p.Phe6673Leu	View
C	T	21855	S	21855C>T	p.Ser98Phe	View
C	T	22000	S	22000C>T	p.His146His	View
A	G	294	ORF1ab	294A>G	p.Glu10Gly	View
C	T	6449	ORF1ab	6449C>T	p.Leu2062Phe	View
C	T	7231	ORF1ab	7231C>T	p.Gly2322Gly	View
T	C	8603	ORF1ab	8603T>C	p.Phe2780Leu	View
G	T	25437	ORF3a	25437G>T	p.Leu15Phe	View
C	T	29730	S	29730C>T		View
C	T	2110	ORF1ab	2110C>T	p.Asn615Asn	View
C	T	11565	ORF1ab	11565C>T	p.Pro3767Leu	View
C	T	27526	ORF7a	27526C>T	p.Pro45Ser	View
A	T	28095	ORF8	28095A>T	p.Lys68*	View
C	T	2623	ORF1ab	2623C>T	p.Asn786Asn	View
T	C	5762	ORF1ab	5762T>C	p.Cys1833Arg	View
C	T	25714	ORF3a	25714C>T	p.Leu108Phe	View
A	G	2161	ORF1ab	2161A>G	p.Glu632Glu	View
C	T	4668	ORF1ab	4668C>T	p.Ser1468Phe	View
C	T	10507	ORF1ab	10507C>T	p.Asn3414Asn	View
G	A	11291	ORF1ab	11291G>A	p.Gly3676Ser	View
T	G	11296	ORF1ab	11296T>G	p.Phe3677Leu	View
C	T	13059	ORF1ab	13059C>T	p.Thr4265Ile	View
T	A	14646	ORF1ab	14646T>A	p.Thr4794Thr	View
T	C	19230	ORF1ab	19230T>C	p.Ile6322Ile	View
G	T	22201	S	22201G>T	p.Val213Val	View
G	C	28690	N	28690G>C	p.Leu139Phe	View
A	G	1674	ORF1ab	1674A>G	p.Asn470Ser	View
C	T	22987	S	22987C>T	p.Ala475Ala	View
C	T	29200	N	29200C>T	p.Pro309Pro	View
A	G	12792	ORF1ab	12792A>G	p.Lys4176Arg	View
C	T	13115	ORF1ab	13115C>T	p.Leu4284Leu	View
C	T	26801	M	26801C>T	p.Leu93Leu	View
C	T	4543	ORF1ab	4543C>T	p.Thr1426Thr	View
T	C	5471	ORF1ab	5471T>C	p.Phe1736Leu	View
G	T	5629	ORF1ab	5629G>T	p.Thr1788Thr	View
G	T	9526	ORF1ab	9526G>T	p.Met3087Ile	View
C	T	11497	ORF1ab	11497C>T	p.Tyr3744Tyr	View
G	A	11527	ORF1ab	11527G>A	p.Leu3754Leu	View
T	G	13788	ORF1ab	13788T>G	p.Arg4508Arg	View
G	T	13993	ORF1ab	13993G>T	p.Ala4577Ser	View
C	T	15371	ORF1ab	15371C>T	p.Thr5036Met	View
G	T	15766	ORF1ab	15766G>T	p.Val5168Leu	View
T	C	16584	ORF1ab	16584T>C	p.Asn5440Asn	View
A	G	16889	ORF1ab	16889A>G	p.Lys5542Arg	View
G	T	17019	ORF1ab	17019G>T	p.Glu5585Asp	View
C	T	18086	ORF1ab	18086C>T	p.Thr5941Ile	View
G	A	22992	S	22992G>A	p.Ser477Asn	View
T	C	23986	S	23986T>C	p.Asp808Asp	View
C	T	25710	ORF3a	25710C>T	p.Leu106Leu	View
G	T	26062	ORF3a	26062G>T	p.Gly224Cys	View
T	C	26876	M	26876T>C	p.Ile118Ile	View
G	C	28975	N	28975G>C	p.Met234Ile	View
G	A	29399	N	29399G>A	p.Ala376Thr	View
C	T	3020	ORF1ab	3020C>T	p.His919Tyr	View
C	T	12049	ORF1ab	12049C>T	p.Asn3928Asn	View
A	G	15196	ORF1ab	15196A>G	p.Thr4978Ala	View
A	G	17799	ORF1ab	17799A>G	p.Val5845Val	View
C	T	18457	ORF1ab	18457C>T	p.Pro6065Ser	View
A	T	23541	S	23541A>T	p.Tyr660Phe	View
G	A	27459	ORF7a	27459G>A	p.Glu22Glu	View
C	A	815	ORF1ab	815C>A	p.Arg184Ser	View
G	A	8084	ORF1ab	8084G>A	p.Glu2607Lys	View
C	A	25710	ORF3a	25710C>A	p.Leu106Leu	View
C	T	2453	ORF1ab	2453C>T	p.Leu730Phe	View
G	T	4136	ORF1ab	4136G>T	p.Val1291Phe	View
T	C	17865	ORF1ab	17865T>C	p.Tyr5867Tyr	View
A	G	21194	ORF1ab	21194A>G	p.Asp6977Gly	View
A	T	23299	S	23299A>T	p.Pro579Pro	View
C	T	920	ORF1ab	920C>T	p.Leu219Leu	View
A	G	2380	ORF1ab	2380A>G	p.Leu705Leu	View
C	T	12534	ORF1ab	12534C>T	p.Thr4090Ile	View
A	G	12652	ORF1ab	12652A>G	p.Thr4129Thr	View
A	G	16538	ORF1ab	16538A>G	p.Asp5425Gly	View
C	T	16575	ORF1ab	16575C>T	p.Asp5437Asp	View
C	T	20806	ORF1ab	20806C>T	p.Leu6848Leu	View
G	T	25471	ORF3a	25471G>T	p.Asp27Tyr	View
C	T	27509	ORF7a	27509C>T	p.Thr39Ile	View
C	T	8950	ORF1ab	8950C>T	p.Ile2895Ile	View
C	T	8964	ORF1ab	8964C>T	p.Ser2900Leu	View
C	T	21234	ORF1ab	21234C>T	p.Ala6990Ala	View
C	T	21575	S	21575C>T	p.Leu5Phe	View
C	T	25844	ORF3a	25844C>T	p.Thr151Ile	View
C	T	27577	ORF7a	27577C>T	p.Gln62*	View
A	G	2784	ORF1ab	2784A>G	p.Asn840Ser	View
T	C	15096	ORF1ab	15096T>C	p.Asn4944Asn	View
C	T	22326	S	22326C>T	p.Ser255Phe	View
G	A	1823	ORF1ab	1823G>A	p.Ala520Thr	View
C	T	5310	ORF1ab	5310C>T	p.Thr1682Ile	View
C	T	6936	ORF1ab	6936C>T	p.Ser2224Phe	View
C	T	13862	ORF1ab	13862C>T	p.Thr4533Ile	View
A	T	13898	ORF1ab	13898A>T	p.Asp4545Val	View
C	T	17676	ORF1ab	17676C>T	p.Ile5804Ile	View
C	T	25460	ORF3a	25460C>T	p.Ala23Val	View
T	C	28177	ORF8	28177T>C	p.Leu95Ser	View
C	T	9163	ORF1ab	9163C>T	p.Asn2966Asn	View
C	T	21057	ORF1ab	21057C>T	p.Asp6931Asp	View
T	C	22741	S	22741T>C	p.Thr393Thr	View
C	T	29614	ORF10	29614C>T	p.Cys19Cys	View
C	T	14688	ORF1ab	14688C>T	p.Asn4808Asn	View
C	T	18486	ORF1ab	18486C>T	p.Leu6074Leu	View
T	A	22342	S	22342T>A	p.Ala260Ala	View
A	G	2920	ORF1ab	2920A>G	p.Pro885Pro	View
C	T	6573	ORF1ab	6573C>T	p.Ser2103Phe	View
C	T	8327	ORF1ab	8327C>T	p.Leu2688Phe	View
T	C	14921	ORF1ab	14921T>C	p.Ile4886Thr	View
G	A	26842	M	26842G>A	p.Arg107His	View
A	G	28624	N	28624A>G	p.Pro117Pro	View
T	C	23479	S	23479T>C	p.Gly639Gly	View
G	T	26065	ORF3a	26065G>T	p.Val225Phe	View
A	T	26612	M	26612A>T	p.Thr30Thr	View
C	T	27643	ORF7a	27643C>T	p.Pro84Ser	View
C	T	2509	ORF1ab	2509C>T	p.Pro748Pro	View
A	G	6635	ORF1ab	6635A>G	p.Thr2124Ala	View
T	C	10060	ORF1ab	10060T>C	p.Gly3265Gly	View
C	T	10969	ORF1ab	10969C>T	p.Phe3568Phe	View
C	T	18131	ORF1ab	18131C>T	p.Thr5956Ile	View
G	T	22567	S	22567G>T	p.Leu335Phe	View
G	A	4255	ORF1ab	4255G>A	p.Pro1330Pro	View
C	T	9891	ORF1ab	9891C>T	p.Ala3209Val	View
C	T	10138	ORF1ab	10138C>T	p.Asn3291Asn	View
G	A	11507	ORF1ab	11507G>A	p.Val3748Ile	View
T	C	27384	ORF6	27384T>C	p.Asp61Asp	View
G	A	174	ORF1ab	174G>A		View
A	G	16920	ORF1ab	16920A>G	p.Thr5552Thr	View
G	T	26416	E	26416G>T	p.Val58Phe	View
C	T	27211	ORF6	27211C>T	p.Leu4Phe	View
T	C	27299	ORF6	27299T>C	p.Ile33Thr	View
T	C	29148	N	29148T>C	p.Ile292Thr	View
C	T	29296	N	29296C>T	p.Asp341Asp	View
C	T	8090	ORF1ab	8090C>T	p.Leu2609Phe	View
C	T	11003	ORF1ab	11003C>T	p.His3580Tyr	View
C	T	16338	ORF1ab	16338C>T	p.Val5358Val	View
G	A	16744	ORF1ab	16744G>A	p.Gly5494Ser	View
C	T	21859	S	21859C>T	p.Asn99Asn	View
T	C	22087	S	22087T>C	p.Phe175Phe	View
T	C	28010	ORF8	28010T>C	p.Ile39Ile	View
A	G	298	ORF1ab	298A>G	p.Lys11Lys	View
G	A	3901	ORF1ab	3901G>A	p.Lys1212Lys	View
C	A	5639	ORF1ab	5639C>A	p.Gln1792Lys	View
C	T	17274	ORF1ab	17274C>T	p.Phe5670Phe	View
C	T	19185	ORF1ab	19185C>T	p.Cys6307Cys	View
A	G	22803	S	22803A>G	p.Gln414Arg	View
C	T	25413	ORF3a	25413C>T	p.Ile7Ile	View
A	G	27723	ORF7a	27723A>G	p.Ile110Met	View
G	A	29134	N	29134G>A	p.Gly287Gly	View
G	T	1048	ORF1ab	1048G>T	p.Lys261Asn	View
T	G	1081	ORF1ab	1081T>G	p.Asn272Lys	View
T	C	19122	ORF1ab	19122T>C	p.Tyr6286Tyr	View
G	T	19388	ORF1ab	19388G>T	p.Ser6375Ile	View
G	T	20578	ORF1ab	20578G>T	p.Val6772Leu	View
C	T	5392	ORF1ab	5392C>T	p.Asn1709Asn	View
T	C	10561	ORF1ab	10561T>C	p.Thr3432Thr	View
C	T	15324	ORF1ab	15324C>T	p.Asn5020Asn	View
C	T	28844	N	28844C>T	p.Arg191Cys	View
C	T	14585	ORF1ab	14585C>T	p.Ala4774Val	View
C	T	18526	ORF1ab	18526C>T	p.Arg6088Cys	View
G	T	26144	ORF3a	26144G>T	p.Gly251Val	View
C	T	11124	ORF1ab	11124C>T	p.Ala3620Val	View
C	T	27697	ORF7a	27697C>T	p.Leu102Phe	View
C	T	832	ORF1ab	832C>T	p.Asn189Asn	View
C	T	1968	ORF1ab	1968C>T	p.Thr568Ile	View
T	C	9585	ORF1ab	9585T>C	p.Val3107Ala	View
T	C	1778	ORF1ab	1778T>C	p.Ser505Pro	View
G	A	6358	ORF1ab	6358G>A	p.Glu2031Glu	View
G	C	23522	S	23522G>C	p.Glu654Gln	View
C	T	29370	N	29370C>T	p.Thr366Ile	View
A	G	2337	ORF1ab	2337A>G	p.Asp691Gly	View
C	T	3737	ORF1ab	3737C>T	p.Pro1158Ser	View
C	T	9165	ORF1ab	9165C>T	p.Thr2967Ile	View
G	T	24087	S	24087G>T	p.Gly842Val	View
C	T	2450	ORF1ab	2450C>T	p.Leu729Leu	View
C	T	7967	ORF1ab	7967C>T	p.Pro2568Ser	View
C	T	26858	M	26858C>T	p.Phe112Phe	View
A	G	28119	ORF8	28119A>G	p.Ile76Val	View
C	T	9886	ORF1ab	9886C>T	p.Tyr3207Tyr	View
C	T	10450	ORF1ab	10450C>T	p.Pro3395Pro	View
C	T	18029	ORF1ab	18029C>T	p.Ala5922Val	View
C	T	20844	ORF1ab	20844C>T	p.Pro6860Pro	View
T	C	21264	ORF1ab	21264T>C	p.Ser7000Ser	View
G	T	25455	ORF3a	25455G>T	p.Lys21Asn	View
C	T	4755	ORF1ab	4755C>T	p.Pro1497Leu	View
T	C	6409	ORF1ab	6409T>C	p.Ser2048Ser	View
T	C	6964	ORF1ab	6964T>C	p.Phe2233Phe	View
C	T	18647	ORF1ab	18647C>T	p.Pro6128Leu	View
T	C	18920	ORF1ab	18920T>C	p.Ile6219Thr	View
C	T	19763	ORF1ab	19763C>T	p.Thr6500Ile	View
A	G	26748	M	26748A>G	p.Ile76Val	View
C	A	29098	N	29098C>A	p.Gly275Gly	View
C	T	3619	ORF1ab	3619C>T	p.Val1118Val	View
C	T	8097	ORF1ab	8097C>T	p.Thr2611Ile	View
C	T	15480	ORF1ab	15480C>T	p.Thr5072Thr	View
A	C	16060	ORF1ab	16060A>C	p.Asn5266His	View
C	T	17550	ORF1ab	17550C>T	p.Leu5762Leu	View
C	T	19017	ORF1ab	19017C>T	p.Phe6251Phe	View
T	C	6232	ORF1ab	6232T>C	p.Pro1989Pro	View
T	C	25794	ORF3a	25794T>C	p.Arg134Arg	View
A	G	26627	M	26627A>G	p.Leu35Leu	View
G	T	28774	N	28774G>T	p.Leu167Phe	View
A	T	15477	ORF1ab	15477A>T	p.Gly5071Gly	View
C	T	29585	ORF10	29585C>T	p.Pro10Ser	View
C	T	5758	ORF1ab	5758C>T	p.Tyr1831Tyr	View
C	T	5944	ORF1ab	5944C>T	p.Asp1893Asp	View
C	T	15026	ORF1ab	15026C>T	p.Ala4921Val	View
A	G	28880	N	28880A>G	p.Arg203Gly	View
G	C	28884	N	28884G>C	p.Gly204Ala	View
C	T	11941	ORF1ab	11941C>T	p.Val3892Val	View
G	T	13897	ORF1ab	13897G>T	p.Asp4545Tyr	View
G	C	21255	ORF1ab	21255G>C	p.Ala6997Ala	View
C	T	25642	ORF3a	25642C>T	p.Leu84Leu	View
A	T	28996	N	28996A>T	p.Gln241His	View
G	A	553	ORF1ab	553G>A	p.Gln96Gln	View
C	T	1108	ORF1ab	1108C>T	p.Ile281Ile	View
G	A	3114	ORF1ab	3114G>A	p.Gly950Asp	View
A	G	19079	ORF1ab	19079A>G	p.Glu6272Gly	View
C	T	19854	ORF1ab	19854C>T	p.Asp6530Asp	View
C	T	21621	S	21621C>T	p.Thr20Ile	View
T	C	21976	S	21976T>C	p.Asp138Asp	View
T	C	29302	N	29302T>C	p.Asp343Asp	View
T	G	29685	S	29685T>G		View
C	T	3177	ORF1ab	3177C>T	p.Pro971Leu	View
A	G	12460	ORF1ab	12460A>G	p.Thr4065Thr	View
C	T	21660	S	21660C>T	p.Thr33Ile	View
C	T	26645	M	26645C>T	p.Asn41Asn	View
T	C	6579	ORF1ab	6579T>C	p.Leu2105Pro	View
C	T	11208	ORF1ab	11208C>T	p.Ala3648Val	View
C	T	28409	N	28409C>T	p.Pro46Ser	View
A	C	4762	ORF1ab	4762A>C	p.Glu1499Asp	View
G	A	25459	ORF3a	25459G>A	p.Ala23Thr	View
A	G	17337	ORF1ab	17337A>G	p.Thr5691Thr	View
T	C	18018	ORF1ab	18018T>C	p.Arg5918Arg	View
C	A	29545	ORF10	29545C>A		View
G	A	24586	S	24586G>A	p.Val1008Val	View
G	T	28357	N	28357G>T	p.Gln28His	View
C	T	29218	N	29218C>T	p.Phe315Phe	View
A	T	29776	S	29776A>T		View
C	T	398	ORF1ab	398C>T	p.His45Tyr	View
T	C	445	ORF1ab	445T>C	p.Val60Val	View
C	T	2037	ORF1ab	2037C>T	p.Ala591Val	View
C	T	4010	ORF1ab	4010C>T	p.Leu1249Phe	View
C	T	5170	ORF1ab	5170C>T	p.Tyr1635Tyr	View
C	T	6286	ORF1ab	6286C>T	p.Thr2007Thr	View
C	T	8140	ORF1ab	8140C>T	p.Ser2625Ser	View
G	T	11132	ORF1ab	11132G>T	p.Ala3623Ser	View
C	T	19610	ORF1ab	19610C>T	p.Thr6449Ile	View
C	T	22227	S	22227C>T	p.Ala222Val	View
G	T	23587	S	23587G>T	p.Gln675His	View
A	G	25438	ORF3a	25438A>G	p.Lys16Glu	View
C	G	26801	M	26801C>G	p.Leu93Leu	View
C	T	27982	ORF8	27982C>T	p.Pro30Leu	View
G	T	28090	ORF8	28090G>T	p.Gly66Val	View
C	T	28932	N	28932C>T	p.Ala220Val	View
G	T	29645	ORF10	29645G>T	p.Val30Leu	View
C	T	1513	ORF1ab	1513C>T	p.Cys416Cys	View
T	G	7274	ORF1ab	7274T>G	p.Phe2337Val	View
C	T	19862	ORF1ab	19862C>T	p.Ala6533Val	View
G	A	28565	N	28565G>A	p.Asp98Asn	View
C	T	106	ORF1ab	106C>T		View
T	C	5182	ORF1ab	5182T>C	p.Asp1639Asp	View
G	T	18546	ORF1ab	18546G>T	p.Met6094Ile	View
C	T	3961	ORF1ab	3961C>T	p.Ile1232Ile	View
T	C	17657	ORF1ab	17657T>C	p.Met5798Thr	View
C	T	21587	S	21587C>T	p.Pro9Ser	View
C	T	24106	S	24106C>T	p.Asp848Asp	View
C	T	24138	S	24138C>T	p.Thr859Ile	View
C	T	25549	ORF3a	25549C>T	p.Leu53Phe	View
T	C	28009	ORF8	28009T>C	p.Ile39Thr	View
C	T	28093	ORF8	28093C>T	p.Ser67Phe	View
T	C	28184	ORF8	28184T>C	p.Ser97Ser	View
C	T	6582	ORF1ab	6582C>T	p.Thr2106Ile	View
C	T	28531	N	28531C>T	p.Tyr86Tyr	View
G	C	29140	N	29140G>C	p.Gln289His	View
C	T	29831	S	29831C>T		View
C	T	3653	ORF1ab	3653C>T	p.Leu1130Phe	View
C	T	12484	ORF1ab	12484C>T	p.Val4073Val	View
A	C	15936	ORF1ab	15936A>C	p.Pro5224Pro	View
G	T	17523	ORF1ab	17523G>T	p.Met5753Ile	View
G	T	21220	ORF1ab	21220G>T	p.Ala6986Ser	View
C	T	7528	ORF1ab	7528C>T	p.Val2421Val	View
C	T	21622	S	21622C>T	p.Thr20Thr	View
C	T	22450	S	22450C>T	p.Leu296Leu	View
C	T	2902	ORF1ab	2902C>T	p.Val879Val	View
T	C	3232	ORF1ab	3232T>C	p.Gly989Gly	View
C	T	6040	ORF1ab	6040C>T	p.Phe1925Phe	View
A	G	13715	ORF1ab	13715A>G	p.Asp4484Gly	View
C	T	14599	ORF1ab	14599C>T	p.Leu4779Leu	View
C	T	15540	ORF1ab	15540C>T	p.Val5092Val	View
G	A	4280	ORF1ab	4280G>A	p.Val1339Ile	View
C	T	22388	S	22388C>T	p.Leu276Leu	View
G	T	28925	N	28925G>T	p.Ala218Ser	View
G	A	1440	ORF1ab	1440G>A	p.Gly392Asp	View
C	T	6627	ORF1ab	6627C>T	p.Thr2121Ile	View
C	T	23987	S	23987C>T	p.Pro809Ser	View
G	T	27762	ORF7b	27762G>T	p.Glu3*	View
C	T	28473	N	28473C>T	p.Pro67Leu	View
C	T	29627	ORF10	29627C>T	p.Arg24Cys	View
C	T	66	ORF1ab	66C>T		View
C	T	5512	ORF1ab	5512C>T	p.Asn1749Asn	View
C	T	25482	ORF3a	25482C>T	p.Arg30Arg	View
C	T	28725	N	28725C>T	p.Pro151Leu	View
C	T	29272	N	29272C>T	p.Tyr333Tyr	View
G	A	1820	ORF1ab	1820G>A	p.Gly519Ser	View
C	T	3784	ORF1ab	3784C>T	p.Val1173Val	View
C	T	5796	ORF1ab	5796C>T	p.Thr1844Ile	View
C	T	9430	ORF1ab	9430C>T	p.Ile3055Ile	View
G	T	12769	ORF1ab	12769G>T	p.Ala4168Ala	View
C	T	12823	ORF1ab	12823C>T	p.Ser4186Ser	View
G	T	16377	ORF1ab	16377G>T	p.Pro5371Pro	View
C	T	25153	S	25153C>T	p.Leu1197Leu	View
C	T	25919	ORF3a	25919C>T	p.Thr176Ile	View
G	T	21604	S	21604G>T	p.Gln14His	View
C	T	22498	S	22498C>T	p.Ile312Ile	View
C	T	14184	ORF1ab	14184C>T	p.Thr4640Thr	View
A	G	15593	ORF1ab	15593A>G	p.Lys5110Arg	View
C	T	28603	N	28603C>T	p.Phe110Phe	View
G	T	10610	ORF1ab	10610G>T	p.Val3449Phe	View
G	T	11335	ORF1ab	11335G>T	p.Val3690Val	View
C	T	14262	ORF1ab	14262C>T	p.Asp4666Asp	View
T	C	22162	S	22162T>C	p.Tyr200Tyr	View
G	A	29494	N	29494G>A	p.Leu407Leu	View
T	C	26061	ORF3a	26061T>C	p.Thr223Thr	View
C	T	843	ORF1ab	843C>T	p.Pro193Leu	View
C	T	2416	ORF1ab	2416C>T	p.Tyr717Tyr	View
C	T	4683	ORF1ab	4683C>T	p.Ala1473Val	View
C	T	10369	ORF1ab	10369C>T	p.Arg3368Arg	View
T	C	11158	ORF1ab	11158T>C	p.His3631His	View
C	A	18693	ORF1ab	18693C>A	p.Ser6143Ser	View
T	C	27193	ORF6	27193T>C		View
C	T	28311	N	28311C>T	p.Pro13Leu	View
A	G	28356	N	28356A>G	p.Gln28Arg	View
G	T	210	ORF1ab	210G>T		View
G	T	2150	ORF1ab	2150G>T	p.Asp629Tyr	View
G	T	4181	ORF1ab	4181G>T	p.Ala1306Ser	View
C	T	6402	ORF1ab	6402C>T	p.Pro2046Leu	View
C	T	7124	ORF1ab	7124C>T	p.Pro2287Ser	View
C	T	8986	ORF1ab	8986C>T	p.Asp2907Asp	View
G	T	9053	ORF1ab	9053G>T	p.Val2930Leu	View
C	T	9491	ORF1ab	9491C>T	p.His3076Tyr	View
C	T	10029	ORF1ab	10029C>T	p.Thr3255Ile	View
A	G	11201	ORF1ab	11201A>G	p.Thr3646Ala	View
A	G	11332	ORF1ab	11332A>G	p.Val3689Val	View
G	A	15451	ORF1ab	15451G>A	p.Gly5063Ser	View
C	T	16466	ORF1ab	16466C>T	p.Pro5401Leu	View
G	A	16861	ORF1ab	16861G>A	p.Val5533Ile	View
A	G	18010	ORF1ab	18010A>G	p.Ile5916Val	View
C	T	19220	ORF1ab	19220C>T	p.Ala6319Val	View
C	G	21618	S	21618C>G	p.Thr19Arg	View
C	T	21846	S	21846C>T	p.Thr95Ile	View
G	A	21987	S	21987G>A	p.Gly142Asp	View
C	T	22082	S	22082C>T	p.Pro174Ser	View
C	A	22995	S	22995C>A	p.Thr478Lys	View
C	G	23604	S	23604C>G	p.Pro681Arg	View
G	A	24410	S	24410G>A	p.Asp950Asn	View
C	T	25469	ORF3a	25469C>T	p.Ser26Leu	View
T	C	27638	ORF7a	27638T>C	p.Val82Ala	View
C	T	27752	ORF7a	27752C>T	p.Thr120Ile	View
C	T	27874	ORF7b	27874C>T	p.Thr40Ile	View
A	G	28461	N	28461A>G	p.Asp63Gly	View
G	T	28881	N	28881G>T	p.Arg203Met	View
G	T	28916	N	28916G>T	p.Gly215Cys	View
G	T	29402	N	29402G>T	p.Asp377Tyr	View
G	T	29742	S	29742G>T		View
T	A	2125	ORF1ab	2125T>A	p.Val620Val	View
A	G	3590	ORF1ab	3590A>G	p.Asn1109Asp	View
C	T	5184	ORF1ab	5184C>T	p.Pro1640Leu	View
T	C	11418	ORF1ab	11418T>C	p.Val3718Ala	View
C	T	11514	ORF1ab	11514C>T	p.Thr3750Ile	View
G	T	13505	ORF1ab	13505G>T	p.Cys4414Phe	View
C	A	17802	ORF1ab	17802C>A	p.Ala5846Ala	View
A	T	26400	E	26400A>T	p.Val52Val	View
G	A	28368	N	28368G>A	p.Arg32His	View
A	G	5584	ORF1ab	5584A>G	p.Thr1773Thr	View
C	T	157	ORF1ab	157C>T		View
G	A	13403	ORF1ab	13403G>A	p.Gly4380Ser	View
T	C	26052	ORF3a	26052T>C	p.Ser220Ser	View
C	T	2695	ORF1ab	2695C>T	p.Asn810Asn	View
T	C	2698	ORF1ab	2698T>C	p.Asn811Asn	View
A	G	4964	ORF1ab	4964A>G	p.Thr1567Ala	View
G	T	9802	ORF1ab	9802G>T	p.Ala3179Ala	View
T	A	17139	ORF1ab	17139T>A	p.Ser5625Ser	View
G	T	18186	ORF1ab	18186G>T	p.Met5974Ile	View
C	T	21707	S	21707C>T	p.His49Tyr	View
A	C	26281	E	26281A>C	p.Ile13Leu	View
T	C	27499	ORF7a	27499T>C	p.Ser36Pro	View
C	T	4014	ORF1ab	4014C>T	p.Thr1250Ile	View
C	T	6706	ORF1ab	6706C>T	p.Asn2147Asn	View
G	A	7100	ORF1ab	7100G>A	p.Ala2279Thr	View
G	A	14118	ORF1ab	14118G>A	p.Thr4618Thr	View
T	C	22195	S	22195T>C	p.Asn211Asn	View
G	A	23384	S	23384G>A	p.Val608Ile	View
G	T	24914	S	24914G>T	p.Asp1118Tyr	View
G	A	25483	ORF3a	25483G>A	p.Ala31Thr	View
T	C	29524	N	29524T>C	p.Thr417Thr	View
C	T	2842	ORF1ab	2842C>T	p.Ala859Ala	View
G	A	3194	ORF1ab	3194G>A	p.Glu977Lys	View
C	T	4206	ORF1ab	4206C>T	p.Ala1314Val	View
G	A	12322	ORF1ab	12322G>A	p.Glu4019Glu	View
A	C	19757	ORF1ab	19757A>C	p.Lys6498Thr	View
T	C	25760	ORF3a	25760T>C	p.Ile123Thr	View
G	T	27598	ORF7a	27598G>T	p.Asp69Tyr	View
C	T	28313	N	28313C>T	p.Arg14Cys	View
A	G	3626	ORF1ab	3626A>G	p.Asn1121Asp	View
G	T	27601	ORF7a	27601G>T	p.Gly70Cys	View
C	T	11195	ORF1ab	11195C>T	p.Leu3644Phe	View
C	T	11653	ORF1ab	11653C>T	p.Leu3796Leu	View
C	T	29284	N	29284C>T	p.Ile337Ile	View
G	T	4126	ORF1ab	4126G>T	p.Val1287Val	View
A	G	5250	ORF1ab	5250A>G	p.Asn1662Ser	View
A	G	10646	ORF1ab	10646A>G	p.Thr3461Ala	View
G	T	17058	ORF1ab	17058G>T	p.Met5598Ile	View
G	T	23126	S	23126G>T	p.Ala522Ser	View
G	T	27261	ORF6	27261G>T	p.Arg20Ser	View
G	T	29779	S	29779G>T		View
C	T	13548	ORF1ab	13548C>T	p.Asp4428Asp	View
G	A	3164	ORF1ab	3164G>A	p.Ala967Thr	View
G	A	6266	ORF1ab	6266G>A	p.Ala2001Thr	View
T	C	29584	ORF10	29584T>C	p.Phe9Phe	View
C	T	203	ORF1ab	203C>T		View
C	T	4475	ORF1ab	4475C>T	p.Arg1404Cys	View
A	G	21779	S	21779A>G	p.Thr73Ala	View
C	T	1713	ORF1ab	1713C>T	p.Ser483Phe	View
G	T	2468	ORF1ab	2468G>T	p.Ala735Ser	View
A	G	15645	ORF1ab	15645A>G	p.Arg5127Arg	View
C	T	18388	ORF1ab	18388C>T	p.Leu6042Leu	View
C	T	27644	ORF7a	27644C>T	p.Pro84Leu	View
C	T	29555	ORF10	29555C>T		View
C	T	619	ORF1ab	619C>T	p.Tyr118Tyr	View
C	T	3365	ORF1ab	3365C>T	p.Leu1034Phe	View
T	C	4813	ORF1ab	4813T>C	p.Tyr1516Tyr	View
C	T	18576	ORF1ab	18576C>T	p.Asp6104Asp	View
C	T	19390	ORF1ab	19390C>T	p.Pro6376Ser	View
T	C	22555	S	22555T>C	p.Asn331Asn	View
G	T	26526	M	26526G>T	p.Ala2Ser	View
C	T	1887	ORF1ab	1887C>T	p.Ala541Val	View
T	G	3256	ORF1ab	3256T>G	p.Asn997Lys	View
C	T	5869	ORF1ab	5869C>T	p.Tyr1868Tyr	View
C	T	6138	ORF1ab	6138C>T	p.Thr1958Ile	View
A	G	8031	ORF1ab	8031A>G	p.Lys2589Arg	View
T	C	8323	ORF1ab	8323T>C	p.Arg2686Arg	View
G	T	13617	ORF1ab	13617G>T	p.Lys4451Asn	View
C	T	16954	ORF1ab	16954C>T	p.Leu5564Leu	View
A	G	26588	M	26588A>G	p.Leu22Leu	View
C	T	335	ORF1ab	335C>T	p.Arg24Cys	View
G	T	3849	ORF1ab	3849G>T	p.Ser1195Ile	View
A	C	4209	ORF1ab	4209A>C	p.Lys1315Thr	View
C	T	9246	ORF1ab	9246C>T	p.Ala2994Val	View
C	T	26191	ORF3a	26191C>T	p.Pro267Ser	View
T	C	29476	N	29476T>C	p.Asp401Asp	View
G	T	2782	ORF1ab	2782G>T	p.Val839Val	View
C	T	4456	ORF1ab	4456C>T	p.Ala1397Ala	View
C	T	16393	ORF1ab	16393C>T	p.Pro5377Ser	View
C	T	7125	ORF1ab	7125C>T	p.Pro2287Leu	View
A	G	11268	ORF1ab	11268A>G	p.Asp3668Gly	View
C	T	15450	ORF1ab	15450C>T	p.Gly5062Gly	View
A	G	24519	S	24519A>G	p.Lys986Arg	View
G	A	28936	N	28936G>A	p.Leu221Leu	View
C	T	2295	ORF1ab	2295C>T	p.Thr677Ile	View
G	A	6052	ORF1ab	6052G>A	p.Lys1929Lys	View
C	T	8326	ORF1ab	8326C>T	p.Asp2687Asp	View
C	T	10319	ORF1ab	10319C>T	p.Leu3352Phe	View
G	T	13503	ORF1ab	13503G>T	p.Pro4413Pro	View
C	T	13620	ORF1ab	13620C>T	p.Asp4452Asp	View
G	T	19872	ORF1ab	19872G>T	p.Val6536Val	View
G	T	25855	ORF3a	25855G>T	p.Asp155Tyr	View
C	T	26111	ORF3a	26111C>T	p.Pro240Leu	View
G	T	27382	ORF6	27382G>T	p.Asp61Tyr	View
C	T	27513	ORF7a	27513C>T	p.Tyr40Tyr	View
T	C	27718	ORF7a	27718T>C	p.Phe109Leu	View
C	T	27964	ORF8	27964C>T	p.Ser24Leu	View
G	T	29254	N	29254G>T	p.Ser327Ser	View
G	T	29474	N	29474G>T	p.Asp401Tyr	View
T	G	4597	ORF1ab	4597T>G	p.Thr1444Thr	View
T	C	4861	ORF1ab	4861T>C	p.Asp1532Asp	View
C	T	50	ORF1ab	50C>T		View
C	T	29545	ORF10	29545C>T		View
G	T	248	ORF1ab	248G>T		View
C	T	6896	ORF1ab	6896C>T	p.Leu2211Leu	View
C	T	20320	ORF1ab	20320C>T	p.His6686Tyr	View
A	G	22798	S	22798A>G	p.Pro412Pro	View
G	T	2494	ORF1ab	2494G>T	p.Glu743Asp	View
G	C	23311	S	23311G>C	p.Glu583Asp	View
A	T	23362	S	23362A>T	p.Pro600Pro	View
C	T	25708	ORF3a	25708C>T	p.Leu106Phe	View
G	A	216	ORF1ab	216G>A		View
C	T	4832	ORF1ab	4832C>T	p.Leu1523Leu	View
A	G	7837	ORF1ab	7837A>G	p.Leu2524Leu	View
C	T	14220	ORF1ab	14220C>T	p.Asp4652Asp	View
C	T	17304	ORF1ab	17304C>T	p.Val5680Val	View
C	T	23673	S	23673C>T	p.Ser704Leu	View
C	T	25667	ORF3a	25667C>T	p.Ser92Leu	View
G	T	3892	ORF1ab	3892G>T	p.Glu1209Asp	View
A	G	5041	ORF1ab	5041A>G	p.Gln1592Gln	View
A	T	1643	ORF1ab	1643A>T	p.Asn460Tyr	View
C	T	2485	ORF1ab	2485C>T	p.Ile740Ile	View
A	G	8837	ORF1ab	8837A>G	p.Ile2858Val	View
A	G	28131	ORF8	28131A>G	p.Thr80Ala	View
C	A	28132	ORF8	28132C>A	p.Thr80Lys	View
T	G	28245	ORF8	28245T>G	p.Leu118Val	View
C	T	28236	ORF8	28236C>T	p.Arg115Cys	View
C	T	815	ORF1ab	815C>T	p.Arg184Cys	View
C	T	4464	ORF1ab	4464C>T	p.Ser1400Leu	View
G	A	7272	ORF1ab	7272G>A	p.Arg2336Lys	View
C	T	12933	ORF1ab	12933C>T	p.Pro4223Leu	View
G	A	14245	ORF1ab	14245G>A	p.Asp4661Asn	View
T	C	16224	ORF1ab	16224T>C	p.His5320His	View
C	T	20692	ORF1ab	20692C>T	p.Pro6810Ser	View
C	T	21843	S	21843C>T	p.Ser94Phe	View
A	T	22115	S	22115A>T	p.Asn185Tyr	View
C	T	25517	ORF3a	25517C>T	p.Pro42Leu	View
G	T	204	ORF1ab	204G>T		View
C	T	673	ORF1ab	673C>T	p.Tyr136Tyr	View
A	G	4457	ORF1ab	4457A>G	p.Ile1398Val	View
C	T	4891	ORF1ab	4891C>T	p.Thr1542Thr	View
C	T	5907	ORF1ab	5907C>T	p.Thr1881Ile	View
A	G	11430	ORF1ab	11430A>G	p.Tyr3722Cys	View
T	C	11485	ORF1ab	11485T>C	p.Val3740Val	View
C	T	12312	ORF1ab	12312C>T	p.Ala4016Val	View
T	C	27576	ORF7a	27576T>C	p.Thr61Thr	View
T	C	29068	N	29068T>C	p.Thr265Thr	View
T	C	29599	ORF10	29599T>C	p.Tyr14Tyr	View
G	T	805	ORF1ab	805G>T	p.Gly180Gly	View
T	C	3270	ORF1ab	3270T>C	p.Ile1002Thr	View
G	A	6102	ORF1ab	6102G>A	p.Gly1946Asp	View
C	T	11950	ORF1ab	11950C>T	p.His3895His	View
C	T	12043	ORF1ab	12043C>T	p.Asp3926Asp	View
A	G	15187	ORF1ab	15187A>G	p.Arg4975Gly	View
G	T	16935	ORF1ab	16935G>T	p.Met5557Ile	View
C	T	17010	ORF1ab	17010C>T	p.Ile5582Ile	View
C	A	22802	S	22802C>A	p.Gln414Lys	View
T	G	22912	S	22912T>G	p.Asn450Lys	View
G	T	25906	ORF3a	25906G>T	p.Gly172Cys	View
C	T	26469	E	26469C>T	p.Val75Val	View
G	T	27506	ORF7a	27506G>T	p.Gly38Val	View
G	T	27798	ORF7b	27798G>T	p.Ala15Ser	View
C	T	28846	N	28846C>T	p.Arg191Arg	View
A	G	5084	ORF1ab	5084A>G	p.Ile1607Val	View
G	A	27666	ORF7a	27666G>A	p.Glu91Glu	View
T	C	18324	ORF1ab	18324T>C	p.His6020His	View
C	T	18501	ORF1ab	18501C>T	p.Tyr6079Tyr	View
G	A	20626	ORF1ab	20626G>A	p.Gly6788Ser	View
A	G	23949	S	23949A>G	p.Asp796Gly	View
C	T	1420	ORF1ab	1420C>T	p.Ala385Ala	View
C	T	10207	ORF1ab	10207C>T	p.Asn3314Asn	View
G	T	15672	ORF1ab	15672G>T	p.Glu5136Asp	View
C	T	23895	S	23895C>T	p.Thr778Ile	View
G	T	25352	S	25352G>T	p.Val1264Leu	View
T	C	11705	ORF1ab	11705T>C	p.Leu3814Leu	View
C	T	1473	ORF1ab	1473C>T	p.Thr403Ile	View
G	A	29473	N	29473G>A	p.Leu400Leu	View
C	T	10202	ORF1ab	10202C>T	p.Leu3313Phe	View
C	T	4794	ORF1ab	4794C>T	p.Ser1510Phe	View
G	T	5012	ORF1ab	5012G>T	p.Val1583Phe	View
C	T	6982	ORF1ab	6982C>T	p.Cys2239Cys	View
C	T	18555	ORF1ab	18555C>T	p.Asp6097Asp	View
C	T	19488	ORF1ab	19488C>T	p.Val6408Val	View
G	T	25650	ORF3a	25650G>T	p.Leu86Phe	View
T	G	28843	N	28843T>G	p.Ser190Arg	View
C	T	703	ORF1ab	703C>T	p.Gly146Gly	View
A	G	22805	S	22805A>G	p.Thr415Ala	View
G	T	3155	ORF1ab	3155G>T	p.Ala964Ser	View
A	G	4485	ORF1ab	4485A>G	p.Lys1407Arg	View
G	T	7328	ORF1ab	7328G>T	p.Ala2355Ser	View
C	T	13720	ORF1ab	13720C>T	p.Pro4486Ser	View
C	T	18693	ORF1ab	18693C>T	p.Ser6143Ser	View
G	T	22346	S	22346G>T	p.Ala262Ser	View
C	T	23230	S	23230C>T	p.Asn556Asn	View
T	C	25597	ORF3a	25597T>C	p.Trp69Arg	View
C	T	6198	ORF1ab	6198C>T	p.Ser1978Phe	View
G	T	17479	ORF1ab	17479G>T	p.Gly5739Cys	View
C	T	23707	S	23707C>T	p.Pro715Pro	View
A	G	24362	S	24362A>G	p.Ile934Val	View
C	A	25487	ORF3a	25487C>A	p.Thr32Asn	View
T	C	26181	ORF3a	26181T>C	p.Ile263Ile	View
T	C	11182	ORF1ab	11182T>C	p.Phe3639Phe	View
A	G	13712	ORF1ab	13712A>G	p.Lys4483Arg	View
C	A	25572	ORF3a	25572C>A	p.Ser60Ser	View
A	G	25616	ORF3a	25616A>G	p.Lys75Arg	View
C	T	26947	M	26947C>T	p.Ala142Val	View
C	T	27294	ORF6	27294C>T	p.Tyr31Tyr	View
C	T	27970	ORF8	27970C>T	p.Thr26Ile	View
C	T	12880	ORF1ab	12880C>T	p.Ile4205Ile	View
G	T	21974	S	21974G>T	p.Asp138Tyr	View
G	T	26109	ORF3a	26109G>T	p.Glu239Asp	View
A	T	29221	N	29221A>T	p.Gly316Gly	View
T	C	1948	ORF1ab	1948T>C	p.Val561Val	View
A	G	3133	ORF1ab	3133A>G	p.Gln956Gln	View
C	T	8389	ORF1ab	8389C>T	p.Asn2708Asn	View
T	C	10107	ORF1ab	10107T>C	p.Val3281Ala	View
G	T	20176	ORF1ab	20176G>T	p.Val6638Phe	View
G	A	1882	ORF1ab	1882G>A	p.Glu539Glu	View
C	T	10252	ORF1ab	10252C>T	p.Phe3329Phe	View
G	A	19872	ORF1ab	19872G>A	p.Val6536Val	View
C	T	26313	E	26313C>T	p.Phe23Phe	View
C	T	27812	ORF7b	27812C>T	p.Phe19Phe	View
C	T	1060	ORF1ab	1060C>T	p.Thr265Thr	View
G	A	21099	ORF1ab	21099G>A	p.Glu6945Glu	View
G	A	189	ORF1ab	189G>A		View
C	T	875	ORF1ab	875C>T	p.Leu204Phe	View
C	T	5628	ORF1ab	5628C>T	p.Thr1788Met	View
C	T	12676	ORF1ab	12676C>T	p.Val4137Val	View
C	T	17678	ORF1ab	17678C>T	p.Thr5805Met	View
G	T	17749	ORF1ab	17749G>T	p.Ala5829Ser	View
C	T	19328	ORF1ab	19328C>T	p.Ala6355Val	View
G	T	23401	S	23401G>T	p.Gln613His	View
C	T	27741	ORF7a	27741C>T	p.Leu116Leu	View
G	A	6008	ORF1ab	6008G>A	p.Val1915Ile	View
G	A	2944	ORF1ab	2944G>A	p.Leu893Leu	View
C	T	7869	ORF1ab	7869C>T	p.Ser2535Leu	View
G	A	27506	ORF7a	27506G>A	p.Gly38Glu	View
G	A	28375	N	28375G>A	p.Gly34Gly	View
C	T	20946	ORF1ab	20946C>T	p.Val6894Val	View
G	T	695	ORF1ab	695G>T	p.Asp144Tyr	View
C	T	4582	ORF1ab	4582C>T	p.Asn1439Asn	View
C	T	6555	ORF1ab	6555C>T	p.Ala2097Val	View
C	T	25350	S	25350C>T	p.Pro1263Leu	View
C	T	1348	ORF1ab	1348C>T	p.Pro361Pro	View
T	A	1516	ORF1ab	1516T>A	p.His417Gln	View
C	T	8419	ORF1ab	8419C>T	p.Phe2718Phe	View
G	A	9489	ORF1ab	9489G>A	p.Ser3075Asn	View
G	T	10642	ORF1ab	10642G>T	p.Thr3459Thr	View
G	T	12845	ORF1ab	12845G>T	p.Ala4194Ser	View
T	C	17142	ORF1ab	17142T>C	p.Ala5626Ala	View
C	T	19273	ORF1ab	19273C>T	p.Pro6337Ser	View
G	C	23900	S	23900G>C	p.Glu780Gln	View
C	T	29530	N	29530C>T	p.Ala419Ala	View
C	T	29578	ORF10	29578C>T	p.Phe7Phe	View
C	T	683	ORF1ab	683C>T	p.Leu140Leu	View
C	T	6968	ORF1ab	6968C>T	p.Leu2235Leu	View
A	G	9259	ORF1ab	9259A>G	p.Val2998Val	View
T	C	15294	ORF1ab	15294T>C	p.Asp5010Asp	View
C	T	23679	S	23679C>T	p.Ala706Val	View
C	T	3817	ORF1ab	3817C>T	p.Asp1184Asp	View
C	T	8895	ORF1ab	8895C>T	p.Thr2877Ile	View
G	C	9738	ORF1ab	9738G>C	p.Ser3158Thr	View
C	T	13019	ORF1ab	13019C>T	p.Leu4252Leu	View
G	A	13713	ORF1ab	13713G>A	p.Lys4483Lys	View
C	T	16394	ORF1ab	16394C>T	p.Pro5377Leu	View
G	T	17014	ORF1ab	17014G>T	p.Asp5584Tyr	View
G	T	21600	S	21600G>T	p.Ser13Ile	View
G	T	22018	S	22018G>T	p.Trp152Cys	View
G	T	22335	S	22335G>T	p.Trp258Leu	View
C	T	22597	S	22597C>T	p.Thr345Thr	View
C	T	26681	M	26681C>T	p.Phe53Phe	View
C	T	28087	ORF8	28087C>T	p.Ala65Val	View
A	T	28272	N	28272A>T		View
C	T	29362	N	29362C>T	p.Phe363Phe	View
C	T	5175	ORF1ab	5175C>T	p.Thr1637Ile	View
C	T	6037	ORF1ab	6037C>T	p.Ser1924Ser	View
C	T	6633	ORF1ab	6633C>T	p.Ala2123Val	View
C	T	8905	ORF1ab	8905C>T	p.Asp2880Asp	View
C	T	14838	ORF1ab	14838C>T	p.Ile4858Ile	View
C	T	16111	ORF1ab	16111C>T	p.Leu5283Leu	View
T	A	16857	ORF1ab	16857T>A	p.Asp5531Glu	View
G	T	19072	ORF1ab	19072G>T	p.Asp6270Tyr	View
G	A	29862	S	29862G>A		View
T	A	29867	S	29867T>A		View
G	A	8083	ORF1ab	8083G>A	p.Met2606Ile	View
C	T	14805	ORF1ab	14805C>T	p.Tyr4847Tyr	View
A	G	18424	ORF1ab	18424A>G	p.Asn6054Asp	View
G	A	19684	ORF1ab	19684G>A	p.Val6474Ile	View
C	T	21304	ORF1ab	21304C>T	p.Arg7014Cys	View
G	T	25907	ORF3a	25907G>T	p.Gly172Val	View
C	T	28472	N	28472C>T	p.Pro67Ser	View
C	T	28869	N	28869C>T	p.Pro199Leu	View
C	A	3373	ORF1ab	3373C>A	p.Asp1036Glu	View
G	T	6352	ORF1ab	6352G>T	p.Lys2029Asn	View
C	T	6395	ORF1ab	6395C>T	p.Leu2044Leu	View
C	T	10702	ORF1ab	10702C>T	p.Asp3479Asp	View
G	A	16718	ORF1ab	16718G>A	p.Arg5485Lys	View
G	A	17019	ORF1ab	17019G>A	p.Glu5585Glu	View
C	T	17104	ORF1ab	17104C>T	p.His5614Tyr	View
A	G	25003	S	25003A>G	p.Ser1147Ser	View
A	G	25718	ORF3a	25718A>G	p.Tyr109Cys	View
G	T	25947	ORF3a	25947G>T	p.Gln185His	View
G	T	27441	ORF7a	27441G>T	p.Glu16Asp	View
A	G	6293	ORF1ab	6293A>G	p.Ile2010Val	View
A	G	11957	ORF1ab	11957A>G	p.Ile3898Val	View
A	G	12091	ORF1ab	12091A>G	p.Gln83Gln	View
T	C	13963	ORF1ab	13963T>C	p.Tyr4567His	View
G	T	18255	ORF1ab	18255G>T	p.Met5997Ile	View
G	C	20464	ORF1ab	20464G>C	p.Asp6734His	View
G	A	20469	ORF1ab	20469G>A	p.Ala6735Ala	View
A	C	20472	ORF1ab	20472A>C	p.Gln6736His	View
G	T	20580	ORF1ab	20580G>T	p.Val6772Val	View
G	A	21986	S	21986G>A	p.Gly142Ser	View
T	A	23684	S	23684T>A	p.Ser708Thr	View
G	T	25049	S	25049G>T	p.Asp1163Tyr	View
G	C	26909	M	26909G>C	p.Leu129Leu	View
C	T	28866	N	28866C>T	p.Thr198Ile	View
G	A	29868	S	29868G>A		View
T	C	13	ORF1ab	13T>C		View
T	A	1334	ORF1ab	1334T>A	p.Cys357Ser	View
A	G	27547	ORF7a	27547A>G	p.Asn52Asp	View
G	C	27572	ORF7a	27572G>C	p.Ser60Thr	View
T	G	27580	ORF7a	27580T>G	p.Phe63Val	View
T	G	27650	ORF7a	27650T>G	p.Leu86Arg	View
C	T	936	ORF1ab	936C>T	p.Thr224Ile	View
T	C	1702	ORF1ab	1702T>C	p.Ser479Ser	View
C	T	4069	ORF1ab	4069C>T	p.Ala1268Ala	View
G	A	4261	ORF1ab	4261G>A	p.Gln1332Gln	View
C	T	12053	ORF1ab	12053C>T	p.Leu3930Phe	View
G	A	13415	ORF1ab	13415G>A	p.Asp4384Asn	View
G	T	21123	ORF1ab	21123G>T	p.Gly6953Gly	View
C	A	22594	S	22594C>A	p.Ala344Ala	View
C	A	24707	S	24707C>A	p.Leu1049Ile	View
G	T	28939	N	28939G>T	p.Leu222Leu	View
T	C	1578	ORF1ab	1578T>C	p.Val438Ala	View
G	A	6618	ORF1ab	6618G>A	p.Gly2118Asp	View
A	C	7833	ORF1ab	7833A>C	p.Asn2523Thr	View
T	C	8929	ORF1ab	8929T>C	p.Val2888Val	View
C	T	10741	ORF1ab	10741C>T	p.Asp3492Asp	View
C	T	11344	ORF1ab	11344C>T	p.Ile3693Ile	View
C	T	23029	S	23029C>T	p.Tyr489Tyr	View
C	T	23996	S	23996C>T	p.Pro812Ser	View
T	C	24076	S	24076T>C	p.Gly838Gly	View
C	T	26885	M	26885C>T	p.Asn121Asn	View
G	A	29266	N	29266G>A	p.Leu331Leu	View
T	C	29710	S	29710T>C		View
GAA	GAAA	29864	S	29864GAA>GAAA		View
C	A	29870	S	29870C>A		View
C	T	1385	ORF1ab	1385C>T	p.His374Tyr	View
G	T	1738	ORF1ab	1738G>T	p.Val491Val	View
G	A	3242	ORF1ab	3242G>A	p.Gly993Ser	View
G	T	6611	ORF1ab	6611G>T	p.Val2116Leu	View
T	A	11581	ORF1ab	11581T>A	p.Thr3772Thr	View
G	A	13960	ORF1ab	13960G>A	p.Val4566Ile	View
C	T	21034	ORF1ab	21034C>T	p.Leu6924Phe	View
C	T	26464	E	26464C>T	p.Leu74Leu	View
G	T	28086	ORF8	28086G>T	p.Ala65Ser	View
C	T	29420	N	29420C>T	p.Pro383Ser	View
T	A	29859	S	29859T>A		View
T	C	29867	S	29867T>C		View
T	C	3161	ORF1ab	3161T>C	p.Ser966Pro	View
C	T	4540	ORF1ab	4540C>T	p.Tyr1425Tyr	View
C	T	5493	ORF1ab	5493C>T	p.Ser1743Phe	View
G	T	25785	ORF3a	25785G>T	p.Trp131Cys	View
G	A	27378	ORF6	27378G>A	p.Glu59Glu	View
G	T	29755	S	29755G>T		View
G	A	29764	S	29764G>A		View
T	C	4100	ORF1ab	4100T>C	p.Leu1279Leu	View
T	C	9867	ORF1ab	9867T>C	p.Leu3201Pro	View
A	C	16500	ORF1ab	16500A>C	p.Gln5412His	View
A	G	20262	ORF1ab	20262A>G	p.Leu6666Leu	View
A	G	22320	S	22320A>G	p.Asp253Gly	View
C	T	27925	ORF8	27925C>T	p.Thr11Ile	View
G	A	28975	N	28975G>A	p.Met234Ile	View
C	T	1314	ORF1ab	1314C>T	p.Thr350Ile	View
C	T	11747	ORF1ab	11747C>T	p.Leu3828Leu	View
A	G	12611	ORF1ab	12611A>G	p.Met4116Val	View
C	T	5497	ORF1ab	5497C>T	p.Cys1744Cys	View
G	T	9928	ORF1ab	9928G>T	p.Met3221Ile	View
C	T	25721	ORF3a	25721C>T	p.Ala110Val	View
T	C	27687	ORF7a	27687T>C	p.Ser98Ser	View
G	C	29737	S	29737G>C		View
G	T	521	ORF1ab	521G>T	p.Val86Phe	View
G	A	2258	ORF1ab	2258G>A	p.Val665Ile	View
A	G	6441	ORF1ab	6441A>G	p.Lys2059Arg	View
T	C	9875	ORF1ab	9875T>C	p.Tyr3204His	View
C	T	16887	ORF1ab	16887C>T	p.Tyr5541Tyr	View
A	G	3198	ORF1ab	3198A>G	p.Asp978Gly	View
G	A	4294	ORF1ab	4294G>A	p.Lys1343Lys	View
C	T	20316	ORF1ab	20316C>T	p.Phe6684Phe	View
C	A	21304	ORF1ab	21304C>A	p.Arg7014Ser	View
G	A	21305	ORF1ab	21305G>A	p.Arg7014His	View
C	T	25585	ORF3a	25585C>T	p.Leu65Phe	View
A	C	696	ORF1ab	696A>C	p.Asp144Ala	View
C	T	1427	ORF1ab	1427C>T	p.His388Tyr	View
T	C	3931	ORF1ab	3931T>C	p.Val1222Val	View
C	T	8655	ORF1ab	8655C>T	p.Ser2797Phe	View
C	T	19524	ORF1ab	19524C>T	p.Leu6420Leu	View
C	T	20429	ORF1ab	20429C>T	p.Pro6722Leu	View
G	T	28817	N	28817G>T	p.Ala182Ser	View
A	C	29863	S	29863A>C		View
A	C	29865	S	29865A>C		View
G	A	6479	ORF1ab	6479G>A	p.Val2072Ile	View
T	C	7984	ORF1ab	7984T>C	p.Asp2573Asp	View
C	T	10747	ORF1ab	10747C>T	p.Asn3494Asn	View
C	T	12357	ORF1ab	12357C>T	p.Thr4031Ile	View
C	T	17004	ORF1ab	17004C>T	p.Leu5580Leu	View
G	A	26672	M	26672G>A	p.Lys50Lys	View
C	T	4021	ORF1ab	4021C>T	p.Asn1252Asn	View
G	T	7042	ORF1ab	7042G>T	p.Met2259Ile	View
C	T	9979	ORF1ab	9979C>T	p.Leu3238Leu	View
A	G	10195	ORF1ab	10195A>G	p.Glu3310Glu	View
G	T	28075	ORF8	28075G>T	p.Cys61Phe	View
T	G	1483	ORF1ab	1483T>G	p.Phe406Leu	View
A	G	9085	ORF1ab	9085A>G	p.Glu2940Glu	View
C	T	11956	ORF1ab	11956C>T	p.Asp3897Asp	View
G	T	13045	ORF1ab	13045G>T	p.Val4260Val	View
G	T	21987	S	21987G>T	p.Gly142Val	View
C	T	28171	ORF8	28171C>T	p.Pro93Leu	View
A	C	3372	ORF1ab	3372A>C	p.Asp1036Ala	View
C	T	15960	ORF1ab	15960C>T	p.Ala5232Ala	View
T	C	22039	S	22039T>C	p.Val159Val	View
A	C	25768	ORF3a	25768A>C	p.Arg126Arg	View
C	T	27923	ORF8	27923C>T	p.Ile10Ile	View
A	G	705	ORF1ab	705A>G	p.Asp147Gly	View
G	A	1463	ORF1ab	1463G>A	p.Gly400Ser	View
G	T	11417	ORF1ab	11417G>T	p.Val3718Phe	View
C	T	13677	ORF1ab	13677C>T	p.Asn4471Asn	View
T	C	16317	ORF1ab	16317T>C	p.Cys5351Cys	View
C	T	18167	ORF1ab	18167C>T	p.Pro5968Leu	View
C	T	18705	ORF1ab	18705C>T	p.Asp6147Asp	View
A	G	21080	ORF1ab	21080A>G	p.Lys6939Arg	View
G	T	26951	M	26951G>T	p.Val143Val	View
G	T	28842	N	28842G>T	p.Ser190Ile	View
C	T	29095	N	29095C>T	p.Phe274Phe	View
C	T	13297	ORF1ab	13297C>T	p.Asp4344Asp	View
C	T	13329	ORF1ab	13329C>T	p.Thr4355Ile	View
C	T	16468	ORF1ab	16468C>T	p.Pro5402Ser	View
G	A	22541	S	22541G>A	p.Val327Ile	View
G	T	24928	S	24928G>T	p.Val1122Val	View
T	C	3682	ORF1ab	3682T>C	p.Asn1139Asn	View
G	T	4148	ORF1ab	4148G>T	p.Val1295Phe	View
T	C	6353	ORF1ab	6353T>C	p.Ser2030Pro	View
C	T	20436	ORF1ab	20436C>T	p.Asp6724Asp	View
TTAC	T	21994	S	21994TTAC>T	p.Tyr145del	View
C	T	22323	S	22323C>T	p.Ser254Phe	View
T	C	25860	ORF3a	25860T>C	p.Tyr156Tyr	View
C	T	27600	ORF7a	27600C>T	p.Asp69Asp	View
C	T	27641	ORF7a	27641C>T	p.Ser83Leu	View
C	T	16208	ORF1ab	16208C>T	p.Ala5315Val	View
T	C	19363	ORF1ab	19363T>C	p.Leu6367Leu	View
C	T	23248	S	23248C>T	p.Phe562Phe	View
C	T	7299	ORF1ab	7299C>T	p.Ala2345Val	View
C	T	23635	S	23635C>T	p.Ser691Ser	View
A	T	28877	N	28877A>T	p.Ser202Cys	View
G	C	28878	N	28878G>C	p.Ser202Thr	View
C	T	4573	ORF1ab	4573C>T	p.Asn1436Asn	View
C	T	29167	N	29167C>T	p.Tyr298Tyr	View
T	C	20349	ORF1ab	20349T>C	p.Ser6695Ser	View
C	T	22432	S	22432C>T	p.Asp290Asp	View
C	T	29358	N	29358C>T	p.Thr362Ile	View
C	T	835	ORF1ab	835C>T	p.Phe190Phe	View
C	T	2773	ORF1ab	2773C>T	p.Tyr836Tyr	View
C	T	2841	ORF1ab	2841C>T	p.Ala859Val	View
G	A	1563	ORF1ab	1563G>A	p.Cys433Tyr	View
G	T	11842	ORF1ab	11842G>T	p.Gln3859His	View
A	G	12533	ORF1ab	12533A>G	p.Thr4090Ala	View
G	T	17252	ORF1ab	17252G>T	p.Arg5663Leu	View
A	T	2647	ORF1ab	2647A>T	p.Lys794Asn	View
T	A	3532	ORF1ab	3532T>A	p.Asp1089Glu	View
C	T	16480	ORF1ab	16480C>T	p.Pro5406Ser	View
A	C	20142	ORF1ab	20142A>C	p.Thr6626Thr	View
G	T	25062	S	25062G>T	p.Gly1167Val	View
C	T	28291	N	28291C>T	p.Pro6Pro	View
C	T	3293	ORF1ab	3293C>T	p.Pro1010Ser	View
C	T	12119	ORF1ab	12119C>T	p.Pro3952Ser	View
C	T	21036	ORF1ab	21036C>T	p.Leu6924Leu	View
A	T	21222	ORF1ab	21222A>T	p.Ala6986Ala	View
C	T	21658	S	21658C>T	p.Phe32Phe	View
C	T	25493	ORF3a	25493C>T	p.Thr34Met	View
C	T	25889	ORF3a	25889C>T	p.Ser166Leu	View
G	T	27047	M	27047G>T	p.Thr175Thr	View
C	T	27944	ORF8	27944C>T	p.His17His	View
G	T	28321	N	28321G>T	p.Thr16Thr	View
C	T	9967	ORF1ab	9967C>T	p.Leu3234Leu	View
G	T	1444	ORF1ab	1444G>T	p.Leu393Phe	View
C	T	1960	ORF1ab	1960C>T	p.Ala565Ala	View
A	G	4870	ORF1ab	4870A>G	p.Val1535Val	View
C	T	14786	ORF1ab	14786C>T	p.Ala4841Val	View
A	G	1673	ORF1ab	1673A>G	p.Asn470Asp	View
C	T	10525	ORF1ab	10525C>T	p.Val3420Val	View
C	A	11005	ORF1ab	11005C>A	p.His3580Gln	View
C	T	27493	ORF7a	27493C>T	p.Pro34Ser	View
G	A	28044	ORF8	28044G>A	p.Ala51Thr	View
T	A	28245	ORF8	28245T>A	p.Leu118Ile	View
A	T	28624	N	28624A>T	p.Pro117Pro	View
C	T	4276	ORF1ab	4276C>T	p.Tyr1337Tyr	View
T	C	5077	ORF1ab	5077T>C	p.Val1604Val	View
C	T	22096	S	22096C>T	p.Asp178Asp	View
G	T	27842	ORF7b	27842G>T	p.Trp29Cys	View
C	T	1471	ORF1ab	1471C>T	p.Arg402Arg	View
A	G	1777	ORF1ab	1777A>G	p.Glu504Glu	View
C	T	3425	ORF1ab	3425C>T	p.Pro1054Ser	View
A	T	11085	ORF1ab	11085A>T	p.Tyr3607Phe	View
C	T	12473	ORF1ab	12473C>T	p.Leu4070Leu	View
G	T	12832	ORF1ab	12832G>T	p.Gln4189His	View
G	T	14055	ORF1ab	14055G>T	p.Leu4597Leu	View
G	A	17991	ORF1ab	17991G>A	p.Leu5909Leu	View
G	A	25939	ORF3a	25939G>A	p.Asp183Asn	View
G	A	27915	ORF8	27915G>A	p.Gly8Arg	View
CA	C	28253	ORF8	28253CA>C	p.Ile121fs	View
T	C	201	ORF1ab	201T>C		View
C	T	679	ORF1ab	679C>T	p.Ala138Ala	View
G	T	4357	ORF1ab	4357G>T	p.Lys1364Asn	View
C	T	8917	ORF1ab	8917C>T	p.Phe2884Phe	View
A	G	9204	ORF1ab	9204A>G	p.Asp2980Gly	View
G	A	12863	ORF1ab	12863G>A	p.Asp4200Asn	View
C	T	18981	ORF1ab	18981C>T	p.His6239His	View
A	T	22101	S	22101A>T	p.Glu180Val	View
C	T	29445	N	29445C>T	p.Thr391Ile	View
C	T	3738	ORF1ab	3738C>T	p.Pro1158Leu	View
T	C	4600	ORF1ab	4600T>C	p.Leu1445Leu	View
G	A	14773	ORF1ab	14773G>A	p.Asp4837Asn	View
C	T	15763	ORF1ab	15763C>T	p.Leu5167Leu	View
C	T	16308	ORF1ab	16308C>T	p.Phe5348Phe	View
G	A	17027	ORF1ab	17027G>A	p.Ser5588Asn	View
T	C	28199	ORF8	28199T>C	p.Cys102Cys	View
A	G	29406	N	29406A>G	p.Glu378Gly	View
C	T	9391	ORF1ab	9391C>T	p.Asp3042Asp	View
C	T	19586	ORF1ab	19586C>T	p.Thr6441Ile	View
C	T	24210	S	24210C>T	p.Thr883Ile	View
T	C	15255	ORF1ab	15255T>C	p.Val4997Val	View
G	A	22894	S	22894G>A	p.Lys444Lys	View
A	T	23894	S	23894A>T	p.Thr778Ser	View
C	T	26256	E	26256C>T	p.Phe4Phe	View
G	T	27514	ORF7a	27514G>T	p.Glu41*	View
A	G	1794	ORF1ab	1794A>G	p.Lys510Arg	View
C	T	6312	ORF1ab	6312C>T	p.Thr2016Ile	View
C	A	18204	ORF1ab	18204C>A	p.Ile5980Ile	View
C	T	19884	ORF1ab	19884C>T	p.Tyr6540Tyr	View
C	T	4321	ORF1ab	4321C>T	p.Ala1352Ala	View
G	T	25523	ORF3a	25523G>T	p.Gly44Val	View
C	A	1628	ORF1ab	1628C>A	p.Gln455Lys	View
C	T	2062	ORF1ab	2062C>T	p.Ala599Ala	View
G	T	2516	ORF1ab	2516G>T	p.Val751Leu	View
A	G	5999	ORF1ab	5999A>G	p.Ile1912Val	View
T	G	6892	ORF1ab	6892T>G	p.Phe2209Leu	View
G	T	12188	ORF1ab	12188G>T	p.Val3975Phe	View
A	T	13267	ORF1ab	13267A>T	p.Ile4334Ile	View
T	C	25577	ORF3a	25577T>C	p.Ile62Thr	View
C	T	25665	ORF3a	25665C>T	p.Tyr91Tyr	View
C	T	26376	E	26376C>T	p.Cys44Cys	View
G	T	28975	N	28975G>T	p.Met234Ile	View
C	T	28609	N	28609C>T	p.Tyr112Tyr	View
C	T	6388	ORF1ab	6388C>T	p.Cys2041Cys	View
C	T	8299	ORF1ab	8299C>T	p.Asn2678Asn	View
C	T	12459	ORF1ab	12459C>T	p.Thr4065Ile	View
A	G	13482	ORF1ab	13482A>G	p.Ter4406Ter	View
G	T	23612	S	23612G>T	p.Ala684Ser	View
C	T	26750	M	26750C>T	p.Ile76Ile	View
T	A	29185	N	29185T>A	p.Ile304Ile	View
G	T	29440	N	29440G>T	p.Gln389His	View
T	C	1927	ORF1ab	1927T>C	p.Thr554Thr	View
T	G	17598	ORF1ab	17598T>G	p.Ala5778Ala	View
G	T	18538	ORF1ab	18538G>T	p.Val6092Leu	View
A	T	22255	S	22255A>T	p.Ile231Ile	View
T	C	25930	ORF3a	25930T>C	p.Ser180Pro	View
A	T	29439	N	29439A>T	p.Gln389Leu	View
C	T	2395	ORF1ab	2395C>T	p.Val710Val	View
T	C	2597	ORF1ab	2597T>C	p.Leu778Leu	View
C	T	8947	ORF1ab	8947C>T	p.Asn2894Asn	View
C	T	12100	ORF1ab	12100C>T	p.Ala3945Ala	View
A	G	12878	ORF1ab	12878A>G	p.Ile4205Val	View
T	C	22846	S	22846T>C	p.Asp428Asp	View
T	C	23155	S	23155T>C	p.Thr531Thr	View
T	C	24349	S	24349T>C	p.Ser929Ser	View
G	T	27890	ORF8	27890G>T		View
G	T	28191	ORF8	28191G>T	p.Val100Leu	View
A	C	5011	ORF1ab	5011A>C	p.Gln1582His	View
C	T	12525	ORF1ab	12525C>T	p.Thr4087Ile	View
C	T	17339	ORF1ab	17339C>T	p.Ala5692Val	View
G	T	19180	ORF1ab	19180G>T	p.Val6306Leu	View
G	T	23236	S	23236G>T	p.Lys558Asn	View
C	T	25000	S	25000C>T	p.Asp1146Asp	View
A	G	25802	ORF3a	25802A>G	p.Asn137Ser	View
C	T	27920	ORF8	27920C>T	p.Ile9Ile	View
G	T	28079	ORF8	28079G>T	p.Val62Val	View
G	T	28300	N	28300G>T	p.Gln9His	View
C	T	28677	N	28677C>T	p.Thr135Ile	View
C	T	28893	N	28893C>T	p.Pro207Leu	View
G	A	3153	ORF1ab	3153G>A	p.Gly963Asp	View
G	A	8863	ORF1ab	8863G>A	p.Val2866Val	View
G	A	18169	ORF1ab	18169G>A	p.Gly5969Ser	View
T	C	23042	S	23042T>C	p.Ser494Pro	View
G	T	25218	S	25218G>T	p.Gly1219Val	View
C	T	25553	ORF3a	25553C>T	p.Ala54Val	View
C	T	27615	ORF7a	27615C>T	p.Val74Val	View
C	T	24034	S	24034C>T	p.Asn824Asn	View
C	T	5025	ORF1ab	5025C>T	p.Ser1587Leu	View
C	T	7749	ORF1ab	7749C>T	p.Thr2495Ile	View
C	T	21364	ORF1ab	21364C>T	p.Pro7034Ser	View
G	T	26520	M	26520G>T		View
A	G	19855	ORF1ab	19855A>G	p.Ile6531Val	View
C	T	29769	S	29769C>T		View
A	G	17406	ORF1ab	17406A>G	p.Arg5714Arg	View
C	T	18032	ORF1ab	18032C>T	p.Thr5923Ile	View
C	T	21952	S	21952C>T	p.Val130Val	View
G	T	23120	S	23120G>T	p.Ala520Ser	View
A	C	2207	ORF1ab	2207A>C	p.Ile648Leu	View
G	A	4656	ORF1ab	4656G>A	p.Arg1464Gln	View
A	G	15618	ORF1ab	15618A>G	p.Arg5118Arg	View
A	C	21231	ORF1ab	21231A>C	p.Thr6989Thr	View
C	T	10156	ORF1ab	10156C>T	p.Asp3297Asp	View
C	T	12763	ORF1ab	12763C>T	p.Asp4166Asp	View
C	T	21638	S	21638C>T	p.Pro26Ser	View
G	T	23868	S	23868G>T	p.Gly769Val	View
C	T	1912	ORF1ab	1912C>T	p.Ser549Ser	View
C	T	2232	ORF1ab	2232C>T	p.Ala656Val	View
C	T	3140	ORF1ab	3140C>T	p.Pro959Ser	View
C	T	7008	ORF1ab	7008C>T	p.Ala2248Val	View
C	T	10954	ORF1ab	10954C>T	p.Cys3563Cys	View
A	G	11117	ORF1ab	11117A>G	p.Ile3618Val	View
C	T	21306	ORF1ab	21306C>T	p.Arg7014Arg	View
A	G	23756	S	23756A>G	p.Thr732Ala	View
T	C	27904	ORF8	27904T>C	p.Leu4Pro	View
C	T	29197	N	29197C>T	p.Ala308Ala	View
G	T	5612	ORF1ab	5612G>T	p.Val1783Phe	View
C	T	7420	ORF1ab	7420C>T	p.Ile2385Ile	View
C	T	7772	ORF1ab	7772C>T	p.Leu2503Phe	View
C	T	29739	S	29739C>T		View
C	T	2838	ORF1ab	2838C>T	p.Ser858Phe	View
C	T	15810	ORF1ab	15810C>T	p.Asn5182Asn	View
G	C	25947	ORF3a	25947G>C	p.Gln185His	View
T	C	27292	ORF6	27292T>C	p.Tyr31His	View
C	T	2700	ORF1ab	2700C>T	p.Thr812Ile	View
C	T	3884	ORF1ab	3884C>T	p.Pro1207Ser	View
C	T	19895	ORF1ab	19895C>T	p.Ala6544Val	View
C	T	22680	S	22680C>T	p.Ser373Leu	View
C	T	6539	ORF1ab	6539C>T	p.His2092Tyr	View
G	C	26951	M	26951G>C	p.Val143Val	View
G	C	29742	S	29742G>C		View
G	A	5326	ORF1ab	5326G>A	p.Glu1687Glu	View
C	T	27769	ORF7b	27769C>T	p.Ser5Leu	View
C	A	27881	ORF7b	27881C>A	p.His42Gln	View
G	C	174	ORF1ab	174G>C		View
A	G	10286	ORF1ab	10286A>G	p.Ile3341Val	View
A	G	161	ORF1ab	161A>G		View
C	T	2736	ORF1ab	2736C>T	p.Thr824Ile	View
T	C	3124	ORF1ab	3124T>C	p.Asp953Asp	View
G	A	22021	S	22021G>A	p.Met153Ile	View
G	A	1464	ORF1ab	1464G>A	p.Gly400Asp	View
T	A	2545	ORF1ab	2545T>A	p.Thr760Thr	View
C	T	2937	ORF1ab	2937C>T	p.Thr891Ile	View
C	T	3448	ORF1ab	3448C>T	p.Ala1061Ala	View
G	T	3728	ORF1ab	3728G>T	p.Gly1155Cys	View
C	T	5467	ORF1ab	5467C>T	p.Tyr1734Tyr	View
T	C	5779	ORF1ab	5779T>C	p.His1838His	View
T	C	7767	ORF1ab	7767T>C	p.Ile2501Thr	View
C	T	8047	ORF1ab	8047C>T	p.Tyr2594Tyr	View
A	T	10978	ORF1ab	10978A>T	p.Ala3571Ala	View
C	T	11591	ORF1ab	11591C>T	p.Leu3776Phe	View
G	T	18803	ORF1ab	18803G>T	p.Ser6180Ile	View
T	C	20799	ORF1ab	20799T>C	p.Tyr6845Tyr	View
A	G	21684	S	21684A>G	p.Lys41Arg	View
C	A	22879	S	22879C>A	p.Asn439Lys	View
A	G	23631	S	23631A>G	p.Gln690Arg	View
A	T	25881	ORF3a	25881A>T	p.Val163Val	View
C	A	26078	ORF3a	26078C>A	p.Thr229Asn	View
C	T	27131	M	27131C>T	p.Asn203Asn	View
G	C	29734	S	29734G>C		View
G	T	3483	ORF1ab	3483G>T	p.Gly1073Val	View
C	T	7086	ORF1ab	7086C>T	p.Thr2274Ile	View
T	C	11587	ORF1ab	11587T>C	p.Asn3774Asn	View
C	T	16650	ORF1ab	16650C>T	p.Leu5462Leu	View
G	T	18027	ORF1ab	18027G>T	p.Val5921Val	View
A	C	19098	ORF1ab	19098A>C	p.Ala6278Ala	View
A	T	20675	ORF1ab	20675A>T	p.Gln6804Leu	View
G	T	20679	ORF1ab	20679G>T	p.Pro6805Pro	View
C	T	28606	N	28606C>T	p.Tyr111Tyr	View
G	T	29179	N	29179G>T	p.Pro302Pro	View
A	C	681	ORF1ab	681A>C	p.Asp139Ala	View
T	C	5614	ORF1ab	5614T>C	p.Val1783Val	View
C	T	6026	ORF1ab	6026C>T	p.Pro1921Ser	View
C	T	6762	ORF1ab	6762C>T	p.Thr2166Ile	View
C	T	13551	ORF1ab	13551C>T	p.Ile4429Ile	View
C	T	29625	ORF10	29625C>T	p.Ser23Phe	View
G	T	14772	ORF1ab	14772G>T	p.Gln4836His	View
C	T	1779	ORF1ab	1779C>T	p.Ser505Phe	View
T	C	7711	ORF1ab	7711T>C	p.Asn2482Asn	View
C	T	9996	ORF1ab	9996C>T	p.Ser3244Leu	View
C	T	11001	ORF1ab	11001C>T	p.Thr3579Ile	View
C	T	13860	ORF1ab	13860C>T	p.Asp4532Asp	View
C	T	21595	S	21595C>T	p.Val11Val	View
C	T	23557	S	23557C>T	p.Pro665Pro	View
A	G	7219	ORF1ab	7219A>G	p.Leu2318Leu	View
T	C	26749	M	26749T>C	p.Ile76Thr	View
C	T	28849	N	28849C>T	p.Asn192Asn	View
A	G	513	ORF1ab	513A>G	p.His83Arg	View
C	T	15587	ORF1ab	15587C>T	p.Ala5108Val	View
A	C	17892	ORF1ab	17892A>C	p.Thr5876Thr	View
C	T	12854	ORF1ab	12854C>T	p.Pro4197Ser	View
T	C	1310	ORF1ab	1310T>C	p.Leu349Leu	View
C	T	2544	ORF1ab	2544C>T	p.Thr760Ile	View
C	T	10079	ORF1ab	10079C>T	p.Pro3272Ser	View
C	T	12809	ORF1ab	12809C>T	p.Leu4182Phe	View
G	T	21898	S	21898G>T	p.Ser112Ser	View
T	C	26604	M	26604T>C	p.Phe28Leu	View
C	T	28153	ORF8	28153C>T	p.Thr87Ile	View
G	T	13385	ORF1ab	13385G>T	p.Gly4374Cys	View
C	T	29586	ORF10	29586C>T	p.Pro10Leu	View
G	A	6101	ORF1ab	6101G>A	p.Gly1946Ser	View
A	G	7201	ORF1ab	7201A>G	p.Ser2312Ser	View
C	T	8809	ORF1ab	8809C>T	p.Asp2848Asp	View
A	G	24432	S	24432A>G	p.Gln957Arg	View
A	G	25968	ORF3a	25968A>G	p.Lys192Lys	View
C	T	27739	ORF7a	27739C>T	p.Leu116Phe	View
T	G	28879	N	28879T>G	p.Ser202Arg	View
G	A	4665	ORF1ab	4665G>A	p.Arg1467Lys	View
T	C	13246	ORF1ab	13246T>C	p.Cys4327Cys	View
C	T	15952	ORF1ab	15952C>T	p.Leu5230Leu	View
C	T	18377	ORF1ab	18377C>T	p.Thr6038Ile	View
T	C	24460	S	24460T>C	p.Leu966Leu	View
A	G	9749	ORF1ab	9749A>G	p.Lys3162Glu	View
G	A	11804	ORF1ab	11804G>A	p.Val3847Ile	View
A	G	21801	S	21801A>G	p.Asp80Gly	View
T	C	22032	S	22032T>C	p.Phe157Ser	View
G	T	28044	ORF8	28044G>T	p.Ala51Ser	View
A	G	2276	ORF1ab	2276A>G	p.Ile671Val	View
C	T	9207	ORF1ab	9207C>T	p.Ser2981Phe	View
A	G	143	ORF1ab	143A>G		View
G	T	343	ORF1ab	343G>T	p.Val26Val	View
G	A	6710	ORF1ab	6710G>A	p.Val2149Ile	View
C	T	12333	ORF1ab	12333C>T	p.Ala4023Val	View
G	A	14346	ORF1ab	14346G>A	p.Leu4694Leu	View
C	T	17894	ORF1ab	17894C>T	p.Ala5877Val	View
G	A	1957	ORF1ab	1957G>A	p.Lys564Lys	View
A	T	3094	ORF1ab	3094A>T	p.Pro943Pro	View
G	T	19542	ORF1ab	19542G>T	p.Met6426Ile	View
G	A	22841	S	22841G>A	p.Asp427Asn	View
G	T	25954	ORF3a	25954G>T	p.Gly188Cys	View
A	G	1279	ORF1ab	1279A>G	p.Lys338Lys	View
C	T	1426	ORF1ab	1426C>T	p.Tyr387Tyr	View
C	T	4113	ORF1ab	4113C>T	p.Ala1283Val	View
T	A	5028	ORF1ab	5028T>A	p.Met1588Lys	View
G	T	10753	ORF1ab	10753G>T	p.Val3496Val	View
C	T	12213	ORF1ab	12213C>T	p.Ser3983Phe	View
C	T	20594	ORF1ab	20594C>T	p.Thr6777Ile	View
C	T	21058	ORF1ab	21058C>T	p.Pro6932Ser	View
C	T	29784	S	29784C>T		View
C	T	853	ORF1ab	853C>T	p.Tyr196Tyr	View
T	C	2200	ORF1ab	2200T>C	p.Gly645Gly	View
C	A	4073	ORF1ab	4073C>A	p.Leu1270Ile	View
G	A	4561	ORF1ab	4561G>A	p.Ala1432Ala	View
C	T	25452	ORF3a	25452C>T	p.Ile20Ile	View
G	T	27163	M	27163G>T	p.Ser214Ile	View
C	T	900	ORF1ab	900C>T	p.Ser212Leu	View
C	T	28333	N	28333C>T	p.Pro20Pro	View
C	T	28698	N	28698C>T	p.Pro142Leu	View
A	G	11537	ORF1ab	11537A>G	p.Ile3758Val	View
A	G	15046	ORF1ab	15046A>G	p.Ile4928Val	View
G	A	15957	ORF1ab	15957G>A	p.Gly5231Gly	View
C	T	26873	M	26873C>T	p.Asn117Asn	View
C	T	1102	ORF1ab	1102C>T	p.Ser279Ser	View
C	T	3602	ORF1ab	3602C>T	p.His1113Tyr	View
C	T	6941	ORF1ab	6941C>T	p.Leu2226Leu	View
T	G	8983	ORF1ab	8983T>G	p.Thr2906Thr	View
C	T	21742	S	21742C>T	p.Ser60Ser	View
G	T	24620	S	24620G>T	p.Ala1020Ser	View
A	G	25505	ORF3a	25505A>G	p.Gln38Arg	View
G	T	25996	ORF3a	25996G>T	p.Val202Leu	View
A	T	28133	ORF8	28133A>T	p.Thr80Thr	View
C	T	28651	N	28651C>T	p.Asn126Asn	View
G	C	29751	S	29751G>C		View
G	A	27758	ORF7b	27758G>A	p.Met1?	View
T	A	27760	ORF7b	27760T>A	p.Ile2Asn	View
C	T	12710	ORF1ab	12710C>T	p.Leu4149Leu	View
C	T	21008	ORF1ab	21008C>T	p.Thr6915Ile	View
T	C	22084	S	22084T>C	p.Pro174Pro	View
C	T	23758	S	23758C>T	p.Thr732Thr	View
G	A	1358	ORF1ab	1358G>A	p.Val365Ile	View
G	A	5023	ORF1ab	5023G>A	p.Met1586Ile	View
C	T	12400	ORF1ab	12400C>T	p.Leu4045Leu	View
G	T	13201	ORF1ab	13201G>T	p.Pro4312Pro	View
G	T	16206	ORF1ab	16206G>T	p.Glu5314Asp	View
A	G	16748	ORF1ab	16748A>G	p.Lys5495Arg	View
C	T	18115	ORF1ab	18115C>T	p.His5951Tyr	View
G	A	20679	ORF1ab	20679G>A	p.Pro6805Pro	View
C	T	24130	S	24130C>T	p.Asn856Asn	View
C	T	11704	ORF1ab	11704C>T	p.Tyr3813Tyr	View
C	G	12823	ORF1ab	12823C>G	p.Ser4186Ser	View
C	T	13887	ORF1ab	13887C>T	p.Tyr4541Tyr	View
C	T	17402	ORF1ab	17402C>T	p.Ala5713Val	View
A	G	21390	ORF1ab	21390A>G	p.Leu7042Leu	View
G	A	22180	S	22180G>A	p.Lys206Lys	View
C	T	23481	S	23481C>T	p.Ser640Phe	View
G	A	25621	ORF3a	25621G>A	p.Val77Ile	View
C	T	27883	ORF7b	27883C>T	p.Ala43Val	View
C	T	7113	ORF1ab	7113C>T	p.Thr2283Ile	View
C	T	13421	ORF1ab	13421C>T	p.Leu4386Phe	View
A	G	16938	ORF1ab	16938A>G	p.Pro5558Pro	View
C	T	21302	ORF1ab	21302C>T	p.Pro7013Leu	View
G	T	27074	M	27074G>T	p.Ser184Ser	View
C	T	29686	S	29686C>T		View
G	T	3231	ORF1ab	3231G>T	p.Gly989Val	View
A	G	12850	ORF1ab	12850A>G	p.Arg4195Arg	View
A	G	25876	ORF3a	25876A>G	p.Ser162Gly	View
C	T	28890	N	28890C>T	p.Ser206Phe	View
A	T	29499	N	29499A>T	p.Gln409Leu	View
C	T	1594	ORF1ab	1594C>T	p.Ser443Ser	View
A	G	2726	ORF1ab	2726A>G	p.Thr821Ala	View
T	C	4183	ORF1ab	4183T>C	p.Ala1306Ala	View
T	C	5479	ORF1ab	5479T>C	p.His1738His	View
T	C	6025	ORF1ab	6025T>C	p.Tyr1920Tyr	View
G	A	15349	ORF1ab	15349G>A	p.Val5029Ile	View
C	T	20091	ORF1ab	20091C>T	p.Pro6609Pro	View
C	T	23271	S	23271C>T	p.Ala570Val	View
A	G	3450	ORF1ab	3450A>G	p.Asn1062Ser	View
G	T	4162	ORF1ab	4162G>T	p.Val1299Val	View
C	T	7334	ORF1ab	7334C>T	p.His2357Tyr	View
C	T	8782	ORF1ab	8782C>T	p.Ser2839Ser	View
G	A	19981	ORF1ab	19981G>A	p.Val6573Ile	View
C	T	26521	M	26521C>T		View
G	A	28141	ORF8	28141G>A	p.Cys83Tyr	View
C	A	1267	ORF1ab	1267C>A	p.Gly334Gly	View
C	T	14848	ORF1ab	14848C>T	p.Leu4862Leu	View
T	C	18231	ORF1ab	18231T>C	p.Tyr5989Tyr	View
C	T	275	ORF1ab	275C>T	p.Leu4Phe	View
C	T	1567	ORF1ab	1567C>T	p.Asn434Asn	View
G	A	2272	ORF1ab	2272G>A	p.Lys669Lys	View
A	G	5234	ORF1ab	5234A>G	p.Lys1657Glu	View
A	G	5488	ORF1ab	5488A>G	p.Leu1741Leu	View
T	C	8716	ORF1ab	8716T>C	p.Thr2817Thr	View
T	A	9477	ORF1ab	9477T>A	p.Phe3071Tyr	View
C	T	12815	ORF1ab	12815C>T	p.Leu4184Leu	View
G	T	13459	ORF1ab	13459G>T	p.Ser4398Ser	View
G	A	14371	ORF1ab	14371G>A	p.Ala4703Thr	View
T	C	16857	ORF1ab	16857T>C	p.Asp5531Asp	View
C	T	23778	S	23778C>T	p.Thr739Ile	View
G	A	24697	S	24697G>A	p.Lys1045Lys	View
C	T	25613	ORF3a	25613C>T	p.Ser74Phe	View
G	T	25979	ORF3a	25979G>T	p.Gly196Val	View
T	C	28144	ORF8	28144T>C	p.Leu84Ser	View
C	T	28657	N	28657C>T	p.Asp128Asp	View
C	T	29366	N	29366C>T	p.Pro365Ser	View
C	T	29421	N	29421C>T	p.Pro383Leu	View
C	A	2462	ORF1ab	2462C>A	p.Leu733Ile	View
G	A	5612	ORF1ab	5612G>A	p.Val1783Ile	View
C	T	6525	ORF1ab	6525C>T	p.Thr2087Ile	View
C	T	13694	ORF1ab	13694C>T	p.Thr4477Ile	View
T	C	20739	ORF1ab	20739T>C	p.Leu6825Leu	View
C	A	22000	S	22000C>A	p.His146Gln	View
A	C	22005	S	22005A>C	p.Asn148Thr	View
T	C	23245	S	23245T>C	p.Pro561Pro	View
T	G	25686	ORF3a	25686T>G	p.Ala98Ala	View
C	T	27610	ORF7a	27610C>T	p.His73Tyr	View
C	T	28706	N	28706C>T	p.His145Tyr	View
C	T	29274	N	29274C>T	p.Thr334Ile	View
C	T	8127	ORF1ab	8127C>T	p.Ala2621Val	View
G	T	16137	ORF1ab	16137G>T	p.Met5291Ile	View
G	C	22363	S	22363G>C	p.Val267Val	View
C	A	13424	ORF1ab	13424C>A	p.Arg4387Ser	View
C	T	29409	N	29409C>T	p.Thr379Ile	View
C	T	29411	N	29411C>T	p.Gln380*	View
A	T	29412	N	29412A>T	p.Gln380Leu	View
C	T	15752	ORF1ab	15752C>T	p.Ala5163Val	View
C	T	19070	ORF1ab	19070C>T	p.Ala6269Val	View
C	T	27119	M	27119C>T	p.Tyr199Tyr	View
C	T	22224	S	22224C>T	p.Ser221Leu	View
C	T	2862	ORF1ab	2862C>T	p.Thr866Ile	View
C	T	20148	ORF1ab	20148C>T	p.Phe6628Phe	View
C	T	5893	ORF1ab	5893C>T	p.Thr1876Thr	View
G	A	10193	ORF1ab	10193G>A	p.Glu3310Lys	View
A	T	10195	ORF1ab	10195A>T	p.Glu3310Asp	View
G	A	10805	ORF1ab	10805G>A	p.Gly3514Arg	View
T	C	22981	S	22981T>C	p.Tyr473Tyr	View
A	G	2473	ORF1ab	2473A>G	p.Pro736Pro	View
C	T	4410	ORF1ab	4410C>T	p.Ala1382Val	View
A	G	11260	ORF1ab	11260A>G	p.Thr3665Thr	View
C	T	25006	S	25006C>T	p.Phe1148Phe	View
G	A	1857	ORF1ab	1857G>A	p.Ser531Asn	View
G	T	22199	S	22199G>T	p.Val213Leu	View
C	T	24579	S	24579C>T	p.Thr1006Ile	View
T	C	25541	ORF3a	25541T>C	p.Val50Ala	View
A	G	10317	ORF1ab	10317A>G	p.Lys3351Arg	View
C	T	24395	S	24395C>T	p.Leu945Phe	View
C	T	715	ORF1ab	715C>T	p.Gly150Gly	View
C	T	3241	ORF1ab	3241C>T	p.Asp992Asp	View
G	A	8548	ORF1ab	8548G>A	p.Lys2761Lys	View
T	C	22020	S	22020T>C	p.Met153Thr	View
G	A	4124	ORF1ab	4124G>A	p.Val1287Met	View
A	T	6121	ORF1ab	6121A>T	p.Ser1952Ser	View
G	T	23426	S	23426G>T	p.Val622Phe	View
G	C	23222	S	23222G>C	p.Glu554Gln	View
C	T	24237	S	24237C>T	p.Ala892Val	View
G	T	8612	ORF1ab	8612G>T	p.Val2783Phe	View
C	T	8937	ORF1ab	8937C>T	p.Ala2891Val	View
C	T	25433	ORF3a	25433C>T	p.Thr14Ile	View
C	T	1191	ORF1ab	1191C>T	p.Pro309Leu	View
C	T	1267	ORF1ab	1267C>T	p.Gly334Gly	View
C	T	11919	ORF1ab	11919C>T	p.Ser3885Phe	View
T	C	12946	ORF1ab	12946T>C	p.Tyr4227Tyr	View
C	T	18176	ORF1ab	18176C>T	p.Pro5971Leu	View
C	T	18348	ORF1ab	18348C>T	p.Thr6028Thr	View
C	T	20031	ORF1ab	20031C>T	p.Ala6589Ala	View
G	T	21641	S	21641G>T	p.Ala27Ser	View
G	A	22317	S	22317G>A	p.Gly252Asp	View
C	T	25672	ORF3a	25672C>T	p.Leu94Phe	View
C	T	26607	M	26607C>T	p.Leu29Phe	View
A	G	4353	ORF1ab	4353A>G	p.Glu1363Gly	View
G	A	8144	ORF1ab	8144G>A	p.Asp2627Asn	View
T	C	21808	S	21808T>C	p.Pro82Pro	View
A	G	22834	S	22834A>G	p.Lys424Lys	View
G	T	28198	ORF8	28198G>T	p.Cys102Phe	View
G	T	29395	N	29395G>T	p.Lys374Asn	View
G	T	29736	S	29736G>T		View
C	T	3736	ORF1ab	3736C>T	p.Asp1157Asp	View
T	C	4619	ORF1ab	4619T>C	p.Tyr1452His	View
C	T	4965	ORF1ab	4965C>T	p.Thr1567Ile	View
C	T	11020	ORF1ab	11020C>T	p.Leu3585Leu	View
G	A	18363	ORF1ab	18363G>A	p.Gln6033Gln	View
C	T	19269	ORF1ab	19269C>T	p.Asn6335Asn	View
C	T	21691	S	21691C>T	p.Phe43Phe	View
G	T	23285	S	23285G>T	p.Ala575Ser	View
A	C	24520	S	24520A>C	p.Lys986Asn	View
C	T	7303	ORF1ab	7303C>T	p.Ile2346Ile	View
G	A	2407	ORF1ab	2407G>A	p.Lys714Lys	View
C	T	2976	ORF1ab	2976C>T	p.Thr904Ile	View
G	T	5008	ORF1ab	5008G>T	p.Thr1581Thr	View
C	T	8311	ORF1ab	8311C>T	p.Asn2682Asn	View
C	T	9319	ORF1ab	9319C>T	p.Phe3018Phe	View
C	T	10833	ORF1ab	10833C>T	p.Ala3523Val	View
G	T	11521	ORF1ab	11521G>T	p.Met3752Ile	View
C	T	14403	ORF1ab	14403C>T	p.Phe4713Phe	View
T	C	19000	ORF1ab	19000T>C	p.Leu6246Leu	View
A	G	19742	ORF1ab	19742A>G	p.Glu6493Gly	View
G	A	19962	ORF1ab	19962G>A	p.Thr6566Thr	View
C	T	21637	S	21637C>T	p.Pro25Pro	View
T	C	22191	S	22191T>C	p.Ile210Thr	View
T	G	22882	S	22882T>G	p.Asn440Lys	View
T	C	24194	S	24194T>C	p.Leu878Leu	View
G	A	24368	S	24368G>A	p.Asp936Asn	View
C	T	24378	S	24378C>T	p.Ser939Phe	View
C	T	24642	S	24642C>T	p.Thr1027Ile	View
G	T	26211	ORF3a	26211G>T	p.Val273Val	View
C	T	26606	M	26606C>T	p.Phe28Phe	View
G	T	27459	ORF7a	27459G>T	p.Glu22Asp	View
C	T	28441	N	28441C>T	p.Leu56Leu	View
G	T	28875	N	28875G>T	p.Ser201Ile	View
C	T	29635	ORF10	29635C>T	p.Tyr26Tyr	View
A	C	1198	ORF1ab	1198A>C	p.Glu311Asp	View
C	T	8240	ORF1ab	8240C>T	p.His2659Tyr	View
C	T	16173	ORF1ab	16173C>T	p.Asn5303Asn	View
C	T	19263	ORF1ab	19263C>T	p.Asn6333Asn	View
C	T	27389	ORF7a	27389C>T		View
C	A	27629	ORF7a	27629C>A	p.Ala79Asp	View
T	C	6787	ORF1ab	6787T>C	p.Thr2174Thr	View
C	T	12952	ORF1ab	12952C>T	p.Tyr4229Tyr	View
C	T	21618	S	21618C>T	p.Thr19Ile	View
G	C	22103	S	22103G>C	p.Gly181Arg	View
G	C	23012	S	23012G>C	p.Glu484Gln	View
C	T	25700	ORF3a	25700C>T	p.Ala103Val	View
G	T	27996	ORF8	27996G>T	p.Asp35Tyr	View
A	T	1412	ORF1ab	1412A>T	p.Ser383Cys	View
C	T	10632	ORF1ab	10632C>T	p.Ala3456Val	View
C	T	24863	S	24863C>T	p.His1101Tyr	View
C	T	18646	ORF1ab	18646C>T	p.Pro6128Ser	View
C	T	19029	ORF1ab	19029C>T	p.His6255His	View
C	T	28961	N	28961C>T	p.Leu230Phe	View
A	G	6506	ORF1ab	6506A>G	p.Asn2081Asp	View
C	T	7834	ORF1ab	7834C>T	p.Asn2523Asn	View
C	T	7840	ORF1ab	7840C>T	p.Asp2525Asp	View
G	T	27703	ORF7a	27703G>T	p.Val104Phe	View
A	G	929	ORF1ab	929A>G	p.Ile222Val	View
A	G	10861	ORF1ab	10861A>G	p.Lys3532Lys	View
CAA	CA	21561	S	21561CAA>CA	p.Met1fs	View
C	T	6128	ORF1ab	6128C>T	p.Leu1955Phe	View
C	T	19983	ORF1ab	19983C>T	p.Val6573Val	View
A	G	24014	S	24014A>G	p.Ile818Val	View
C	T	27263	ORF6	27263C>T	p.Thr21Ile	View
TTTA	T	27794	ORF7b	27794TTTA>T	p.Leu14del	View
C	T	28801	N	28801C>T	p.Ser176Ser	View
A	G	5681	ORF1ab	5681A>G	p.Met1806Val	View
C	T	10556	ORF1ab	10556C>T	p.Pro3431Ser	View
C	T	11669	ORF1ab	11669C>T	p.Arg3802Cys	View
T	C	13027	ORF1ab	13027T>C	p.Ala4254Ala	View
C	T	16658	ORF1ab	16658C>T	p.Thr5465Ile	View
A	G	17730	ORF1ab	17730A>G	p.Glu5822Glu	View
C	T	20823	ORF1ab	20823C>T	p.Asn6853Asn	View
A	T	23534	S	23534A>T	p.Asn658Tyr	View
C	T	25916	ORF3a	25916C>T	p.Thr175Ile	View
G	T	27541	ORF7a	27541G>T	p.Ala50Ser	View
G	T	28003	ORF8	28003G>T	p.Cys37Phe	View
C	T	233	ORF1ab	233C>T		View
G	T	1274	ORF1ab	1274G>T	p.Val337Phe	View
C	T	4809	ORF1ab	4809C>T	p.Ser1515Phe	View
C	T	6628	ORF1ab	6628C>T	p.Thr2121Thr	View
T	C	10163	ORF1ab	10163T>C	p.Tyr3300His	View
A	G	10904	ORF1ab	10904A>G	p.Ser3547Gly	View
C	T	19380	ORF1ab	19380C>T	p.Tyr6372Tyr	View
G	C	19962	ORF1ab	19962G>C	p.Thr6566Thr	View
G	A	23611	S	23611G>A	p.Arg683Arg	View
G	T	25249	S	25249G>T	p.Met1229Ile	View
A	C	29403	N	29403A>C	p.Asp377Ala	View
A	G	4762	ORF1ab	4762A>G	p.Glu1499Glu	View
C	T	12115	ORF1ab	12115C>T	p.Ser3950Ser	View
C	T	16608	ORF1ab	16608C>T	p.Asn5448Asn	View
C	T	21812	S	21812C>T	p.Leu84Leu	View
C	T	2048	ORF1ab	2048C>T	p.Leu595Leu	View
G	A	7252	ORF1ab	7252G>A	p.Leu2329Leu	View
C	T	25810	ORF3a	25810C>T	p.Leu140Phe	View
T	C	4147	ORF1ab	4147T>C	p.Gly1294Gly	View
A	G	9883	ORF1ab	9883A>G	p.Arg3206Arg	View
C	T	29171	N	29171C>T	p.His300Tyr	View
C	T	2142	ORF1ab	2142C>T	p.Pro626Leu	View
C	T	9344	ORF1ab	9344C>T	p.Leu3027Phe	View
T	C	10363	ORF1ab	10363T>C	p.Phe3366Phe	View
C	T	12025	ORF1ab	12025C>T	p.Ser3920Ser	View
C	T	15024	ORF1ab	15024C>T	p.Phe4920Phe	View
C	T	16915	ORF1ab	16915C>T	p.Leu5551Leu	View
C	T	23422	S	23422C>T	p.Val620Val	View
C	A	23453	S	23453C>A	p.Pro631Thr	View
C	T	27807	ORF7b	27807C>T	p.Leu18Leu	View
T	A	29194	N	29194T>A	p.Phe307Leu	View
T	C	1592	ORF1ab	1592T>C	p.Ser443Pro	View
A	G	10823	ORF1ab	10823A>G	p.Thr3520Ala	View
G	A	12067	ORF1ab	12067G>A	p.Met3934Ile	View
A	G	7330	ORF1ab	7330A>G	p.Ala2355Ala	View
C	T	14503	ORF1ab	14503C>T	p.His4747Tyr	View
C	T	14571	ORF1ab	14571C>T	p.Asp4769Asp	View
C	A	27493	ORF7a	27493C>A	p.Pro34Thr	View
C	T	8123	ORF1ab	8123C>T	p.Leu2620Phe	View
C	T	10228	ORF1ab	10228C>T	p.Leu3321Leu	View
C	T	19151	ORF1ab	19151C>T	p.Ala6296Val	View
C	T	21774	S	21774C>T	p.Ser71Phe	View
G	A	28980	N	28980G>A	p.Gly236Asp	View
C	A	6187	ORF1ab	6187C>A	p.His1974Gln	View
T	C	12640	ORF1ab	12640T>C	p.Pro4125Pro	View
C	T	2263	ORF1ab	2263C>T	p.Thr666Thr	View
C	T	8683	ORF1ab	8683C>T	p.Ile2806Ile	View
C	T	10965	ORF1ab	10965C>T	p.Thr3567Ile	View
G	A	15439	ORF1ab	15439G>A	p.Val5059Ile	View
C	T	29696	S	29696C>T		View
A	C	3691	ORF1ab	3691A>C	p.Glu1142Asp	View
T	G	4344	ORF1ab	4344T>G	p.Ile1360Ser	View
G	A	17561	ORF1ab	17561G>A	p.Arg5766Gln	View
T	C	22963	S	22963T>C	p.Asp467Asp	View
C	T	29738	S	29738C>T		View
A	G	9848	ORF1ab	9848A>G	p.Ser3195Gly	View
C	T	7011	ORF1ab	7011C>T	p.Ala2249Val	View
C	T	19593	ORF1ab	19593C>T	p.Asn6443Asn	View
C	A	22079	S	22079C>A	p.Gln173Lys	View
G	T	24193	S	24193G>T	p.Leu877Leu	View
C	T	29364	N	29364C>T	p.Pro364Leu	View
T	A	6322	ORF1ab	6322T>A	p.Val2019Val	View
C	T	7712	ORF1ab	7712C>T	p.Pro2483Ser	View
G	C	25696	ORF3a	25696G>C	p.Glu102Gln	View
G	A	29543	ORF10	29543G>A		View
T	C	4258	ORF1ab	4258T>C	p.Gly1331Gly	View
C	T	7056	ORF1ab	7056C>T	p.Thr2264Ile	View
G	A	17641	ORF1ab	17641G>A	p.Ala5793Thr	View
G	T	526	ORF1ab	526G>T	p.Glu87Asp	View
G	A	25540	ORF3a	25540G>A	p.Val50Ile	View
G	T	26398	E	26398G>T	p.Val52Leu	View
G	A	4678	ORF1ab	4678G>A	p.Val1471Val	View
C	T	6250	ORF1ab	6250C>T	p.Asn1995Asn	View
T	C	12865	ORF1ab	12865T>C	p.Asp4200Asp	View
G	A	26452	E	26452G>A	p.Val70Ile	View
G	T	27758	ORF7a	27758G>T	p.Ter122Leuext*?	View
G	T	28871	N	28871G>T	p.Gly200Cys	View
G	T	10300	ORF1ab	10300G>T	p.Met3345Ile	View
C	T	26208	ORF3a	26208C>T	p.Ser272Ser	View
C	T	27688	ORF7a	27688C>T	p.Pro99Ser	View
A	G	3405	ORF1ab	3405A>G	p.Glu1047Gly	View
C	T	3634	ORF1ab	3634C>T	p.Asn1123Asn	View
C	T	5281	ORF1ab	5281C>T	p.Asn1672Asn	View
A	G	11595	ORF1ab	11595A>G	p.Gln3777Arg	View
C	T	12733	ORF1ab	12733C>T	p.Ala4156Ala	View
T	C	15669	ORF1ab	15669T>C	p.Asn5135Asn	View
T	C	18813	ORF1ab	18813T>C	p.Asp6183Asp	View
A	G	19821	ORF1ab	19821A>G	p.Pro6519Pro	View
G	T	10105	ORF1ab	10105G>T	p.Met3280Ile	View
C	T	17634	ORF1ab	17634C>T	p.Asp5790Asp	View
C	T	8025	ORF1ab	8025C>T	p.Ala2587Val	View
C	T	25513	ORF3a	25513C>T	p.Leu41Phe	View
C	T	27686	ORF7a	27686C>T	p.Ser98Phe	View
C	T	28498	N	28498C>T	p.Asn75Asn	View
C	T	7860	ORF1ab	7860C>T	p.Thr2532Ile	View
C	T	9264	ORF1ab	9264C>T	p.Thr3000Ile	View
T	C	22939	S	22939T>C	p.Ser459Ser	View
G	A	5037	ORF1ab	5037G>A	p.Gly1591Glu	View
C	T	10604	ORF1ab	10604C>T	p.Pro3447Ser	View
T	C	10975	ORF1ab	10975T>C	p.Ser3570Ser	View
C	T	27213	ORF6	27213C>T	p.Leu4Leu	View
C	T	27889	ORF8	27889C>T		View
A	G	4952	ORF1ab	4952A>G	p.Arg1563Gly	View
C	A	18491	ORF1ab	18491C>A	p.Pro6076Gln	View
C	T	18744	ORF1ab	18744C>T	p.Tyr6160Tyr	View
G	T	28895	N	28895G>T	p.Ala208Ser	View
G	A	29742	S	29742G>A		View
C	T	18263	ORF1ab	18263C>T	p.Thr6000Ile	View
C	T	24213	S	24213C>T	p.Ser884Phe	View
C	T	27536	ORF7a	27536C>T	p.Pro48Leu	View
C	T	28310	N	28310C>T	p.Pro13Ser	View
C	T	8760	ORF1ab	8760C>T	p.Ala2832Val	View
T	C	17154	ORF1ab	17154T>C	p.Tyr5630Tyr	View
C	T	27494	ORF7a	27494C>T	p.Pro34Leu	View
A	C	28856	N	28856A>C	p.Arg195Arg	View
T	C	25852	ORF3a	25852T>C	p.Tyr154His	View
C	T	7119	ORF1ab	7119C>T	p.Ser2285Phe	View
A	G	11155	ORF1ab	11155A>G	p.Lys3630Lys	View
C	T	20081	ORF1ab	20081C>T	p.Ser6606Phe	View
T	C	24976	S	24976T>C	p.Tyr1138Tyr	View
T	C	8614	ORF1ab	8614T>C	p.Val2783Val	View
A	G	11246	ORF1ab	11246A>G	p.Met3661Val	View
T	C	19896	ORF1ab	19896T>C	p.Ala6544Ala	View
G	T	25647	ORF3a	25647G>T	p.Leu85Phe	View
C	T	1609	ORF1ab	1609C>T	p.Asp448Asp	View
C	T	12651	ORF1ab	12651C>T	p.Thr4129Ile	View
T	C	14279	ORF1ab	14279T>C	p.Leu4672Ser	View
T	C	16357	ORF1ab	16357T>C	p.Leu5365Leu	View
G	T	22225	S	22225G>T	p.Ser221Ser	View
C	T	24370	S	24370C>T	p.Asp936Asp	View
T	C	27623	ORF7a	27623T>C	p.Leu77Ser	View
C	T	27881	ORF7b	27881C>T	p.His42His	View
C	T	2662	ORF1ab	2662C>T	p.Tyr799Tyr	View
C	T	12295	ORF1ab	12295C>T	p.Thr4010Thr	View
A	T	26528	M	26528A>T	p.Ala2Ala	View
G	T	29734	S	29734G>T		View
G	T	27390	ORF7a	27390G>T		View
G	A	7427	ORF1ab	7427G>A	p.Ala2388Thr	View
C	T	22713	S	22713C>T	p.Pro384Leu	View
G	T	24872	S	24872G>T	p.Val1104Leu	View
C	T	9712	ORF1ab	9712C>T	p.Ser3149Ser	View
C	T	11339	ORF1ab	11339C>T	p.Leu3692Leu	View
C	T	19836	ORF1ab	19836C>T	p.Leu6524Leu	View
A	T	28666	N	28666A>T	p.Ile131Ile	View
T	C	9982	ORF1ab	9982T>C	p.Asn3239Asn	View
G	T	13975	ORF1ab	13975G>T	p.Gly4571Cys	View
G	T	18169	ORF1ab	18169G>T	p.Gly5969Cys	View
T	G	25510	ORF3a	25510T>G	p.Ser40Ala	View
G	T	28736	N	28736G>T	p.Ala155Ser	View
C	T	27737	ORF7a	27737C>T	p.Thr115Ile	View
C	T	421	ORF1ab	421C>T	p.Gly52Gly	View
C	T	23191	S	23191C>T	p.Phe543Phe	View
C	T	4115	ORF1ab	4115C>T	p.Pro1284Ser	View
G	A	12131	ORF1ab	12131G>A	p.Ala3956Thr	View
C	T	14925	ORF1ab	14925C>T	p.Val4887Val	View
C	A	22716	S	22716C>A	p.Thr385Asn	View
T	C	22717	S	22717T>C	p.Thr385Thr	View
A	G	28113	ORF8	28113A>G	p.Ile74Val	View
C	T	26642	M	26642C>T	p.Ala40Ala	View
C	T	29724	S	29724C>T		View
C	T	1342	ORF1ab	1342C>T	p.Tyr359Tyr	View
T	C	4237	ORF1ab	4237T>C	p.Asn1324Asn	View
C	T	4763	ORF1ab	4763C>T	p.His1500Tyr	View
T	G	15420	ORF1ab	15420T>G	p.Ala5052Ala	View
C	T	19011	ORF1ab	19011C>T	p.Asp6249Asp	View
C	T	27765	ORF7b	27765C>T	p.Leu4Phe	View
G	C	8602	ORF1ab	8602G>C	p.Val2779Val	View
C	T	22513	S	22513C>T	p.Asn317Asn	View
C	T	5544	ORF1ab	5544C>T	p.Thr1760Ile	View
T	C	16939	ORF1ab	16939T>C	p.Leu5559Leu	View
C	T	18246	ORF1ab	18246C>T	p.Tyr5994Tyr	View
A	G	22011	S	22011A>G	p.Lys150Arg	View
C	T	25571	ORF3a	25571C>T	p.Ser60Phe	View
A	G	28165	ORF8	28165A>G	p.Gln91Arg	View
C	T	3787	ORF1ab	3787C>T	p.Tyr1174Tyr	View
C	T	19186	ORF1ab	19186C>T	p.Leu6308Leu	View
C	T	24904	S	24904C>T	p.Ile1114Ile	View
C	A	2449	ORF1ab	2449C>A	p.Gly728Gly	View
G	A	12793	ORF1ab	12793G>A	p.Lys4176Lys	View
C	T	28164	ORF8	28164C>T	p.Gln91*	View
C	T	829	ORF1ab	829C>T	p.Asn188Asn	View
C	T	8626	ORF1ab	8626C>T	p.Phe2787Phe	View
G	T	12988	ORF1ab	12988G>T	p.Met4241Ile	View
C	T	14697	ORF1ab	14697C>T	p.Phe4811Phe	View
G	A	15598	ORF1ab	15598G>A	p.Val5112Ile	View
G	T	18028	ORF1ab	18028G>T	p.Ala5922Ser	View
G	T	19398	ORF1ab	19398G>T	p.Glu6378Asp	View
C	T	22127	S	22127C>T	p.Leu189Phe	View
G	A	23876	S	23876G>A	p.Val772Ile	View
T	C	24910	S	24910T>C	p.Thr1116Thr	View
T	C	25750	ORF3a	25750T>C	p.Phe120Leu	View
T	C	26972	M	26972T>C	p.Arg150Arg	View
C	A	27800	ORF7b	27800C>A	p.Ala15Ala	View
C	T	8660	ORF1ab	8660C>T	p.His2799Tyr	View
A	T	28415	N	28415A>T	p.Asn48Tyr	View
T	A	12169	ORF1ab	12169T>A	p.Val3968Val	View
C	T	15240	ORF1ab	15240C>T	p.Asn4992Asn	View
A	G	19126	ORF1ab	19126A>G	p.Ile6288Val	View
G	T	26466	E	26466G>T	p.Leu74Leu	View
T	C	27616	ORF7a	27616T>C	p.Tyr75His	View
G	T	27754	ORF7a	27754G>T	p.Glu121*	View
G	A	1304	ORF1ab	1304G>A	p.Glu347Lys	View
G	T	25440	ORF3a	25440G>T	p.Lys16Asn	View
C	T	5884	ORF1ab	5884C>T	p.Tyr1873Tyr	View
T	A	6937	ORF1ab	6937T>A	p.Ser2224Ser	View
C	T	2306	ORF1ab	2306C>T	p.Leu681Phe	View
G	T	8179	ORF1ab	8179G>T	p.Arg2638Arg	View
C	T	15656	ORF1ab	15656C>T	p.Thr5131Ile	View
C	T	2470	ORF1ab	2470C>T	p.Ala735Ala	View
A	G	13032	ORF1ab	13032A>G	p.Asn4256Ser	View
G	T	26918	M	26918G>T	p.Pro132Pro	View
C	T	26985	M	26985C>T	p.His155Tyr	View
G	A	2879	ORF1ab	2879G>A	p.Ala872Thr	View
C	A	8243	ORF1ab	8243C>A	p.Gln2660Lys	View
T	G	17604	ORF1ab	17604T>G	p.Val5780Val	View
T	C	25514	ORF3a	25514T>C	p.Leu41Pro	View
G	T	29081	N	29081G>T	p.Val270Leu	View
A	G	8052	ORF1ab	8052A>G	p.Asn2596Ser	View
G	T	10396	ORF1ab	10396G>T	p.Val3377Val	View
G	A	11679	ORF1ab	11679G>A	p.Arg3805Lys	View
ACTT	A	22280	S	22280ACTT>A	p.Thr240_Leu241delinsIle	View
C	T	4704	ORF1ab	4704C>T	p.Pro1480Leu	View
A	T	13012	ORF1ab	13012A>T	p.Thr4249Thr	View
T	C	20859	ORF1ab	20859T>C	p.Val6865Val	View
G	T	22468	S	22468G>T	p.Thr302Thr	View
C	T	8890	ORF1ab	8890C>T	p.Arg2875Arg	View
C	T	11109	ORF1ab	11109C>T	p.Ala3615Val	View
T	C	597	ORF1ab	597T>C	p.Val111Ala	View
C	T	3695	ORF1ab	3695C>T	p.Leu1144Leu	View
C	T	10340	ORF1ab	10340C>T	p.Pro3359Ser	View
C	T	21767	S	21767C>T	p.His69Tyr	View
C	T	23934	S	23934C>T	p.Thr791Ile	View
C	A	24138	S	24138C>A	p.Thr859Asn	View
G	C	24410	S	24410G>C	p.Asp950His	View
T	C	25072	S	25072T>C	p.Ser1170Ser	View
C	T	28005	ORF8	28005C>T	p.Pro38Ser	View
T	G	7685	ORF1ab	7685T>G	p.Ser2474Ala	View
C	T	14340	ORF1ab	14340C>T	p.Asn4692Asn	View
A	G	16569	ORF1ab	16569A>G	p.Thr5435Thr	View
G	A	17551	ORF1ab	17551G>A	p.Gly5763Arg	View
A	G	19167	ORF1ab	19167A>G	p.Lys6301Lys	View
C	A	19274	ORF1ab	19274C>A	p.Pro6337His	View
C	T	20762	ORF1ab	20762C>T	p.Thr6833Ile	View
G	T	22017	S	22017G>T	p.Trp152Leu	View
C	T	28833	N	28833C>T	p.Ser187Leu	View
G	T	29527	N	29527G>T	p.Gln418His	View
C	T	100	ORF1ab	100C>T		View
C	T	503	ORF1ab	503C>T	p.Pro80Ser	View
T	C	3477	ORF1ab	3477T>C	p.Val1071Ala	View
T	C	3766	ORF1ab	3766T>C	p.Asp1167Asp	View
C	T	5694	ORF1ab	5694C>T	p.Pro1810Leu	View
C	T	9711	ORF1ab	9711C>T	p.Ser3149Phe	View
T	G	10667	ORF1ab	10667T>G	p.Leu3468Val	View
C	T	11824	ORF1ab	11824C>T	p.Ile3853Ile	View
A	G	12964	ORF1ab	12964A>G	p.Gly4233Gly	View
C	T	14913	ORF1ab	14913C>T	p.Asn4883Asn	View
A	G	19578	ORF1ab	19578A>G	p.Gln6438Gln	View
G	T	25088	S	25088G>T	p.Val1176Phe	View
A	G	28381	N	28381A>G	p.Arg36Arg	View
G	T	28628	N	28628G>T	p.Ala119Ser	View
C	T	29754	S	29754C>T		View
T	C	733	ORF1ab	733T>C	p.Asp156Asp	View
C	T	2749	ORF1ab	2749C>T	p.Asp828Asp	View
C	T	3828	ORF1ab	3828C>T	p.Ser1188Leu	View
A	C	5648	ORF1ab	5648A>C	p.Lys1795Gln	View
T	C	5854	ORF1ab	5854T>C	p.Ile1863Ile	View
A	G	6319	ORF1ab	6319A>G	p.Pro2018Pro	View
A	G	6613	ORF1ab	6613A>G	p.Val2116Val	View
T	C	7183	ORF1ab	7183T>C	p.Thr2306Thr	View
A	G	10951	ORF1ab	10951A>G	p.Gln3562Gln	View
C	T	12778	ORF1ab	12778C>T	p.Tyr4171Tyr	View
G	T	17259	ORF1ab	17259G>T	p.Glu5665Asp	View
C	A	21621	S	21621C>A	p.Thr20Asn	View
G	T	22132	S	22132G>T	p.Arg190Ser	View
A	C	22812	S	22812A>C	p.Lys417Thr	View
C	T	23525	S	23525C>T	p.His655Tyr	View
T	C	26149	ORF3a	26149T>C	p.Ser253Pro	View
G	A	28167	ORF8	28167G>A	p.Glu92Lys	View
C	G	28512	N	28512C>G	p.Pro80Arg	View
T	A	29834	S	29834T>A		View
T	C	592	ORF1ab	592T>C	p.Pro109Pro	View
A	G	4040	ORF1ab	4040A>G	p.Ile1259Val	View
G	T	14874	ORF1ab	14874G>T	p.Lys4870Asn	View
C	T	26039	ORF3a	26039C>T	p.Ser216Leu	View
C	T	23625	S	23625C>T	p.Ala688Val	View
C	T	24502	S	24502C>T	p.Ile980Ile	View
G	T	4285	ORF1ab	4285G>T	p.Glu1340Asp	View
C	A	18647	ORF1ab	18647C>A	p.Pro6128His	View
T	G	27531	ORF7a	27531T>G	p.Phe46Leu	View
C	T	13665	ORF1ab	13665C>T	p.His4467His	View
C	T	26110	ORF3a	26110C>T	p.Pro240Ser	View
G	A	1580	ORF1ab	1580G>A	p.Val439Ile	View
G	A	1379	ORF1ab	1379G>A	p.Ala372Thr	View
C	T	19264	ORF1ab	19264C>T	p.Leu6334Phe	View
C	T	9724	ORF1ab	9724C>T	p.Phe3153Phe	View
A	G	18550	ORF1ab	18550A>G	p.Ser6096Gly	View
C	T	19164	ORF1ab	19164C>T	p.Asp6300Asp	View
G	A	26787	M	26787G>A	p.Gly89Ser	View
C	T	27297	ORF6	27297C>T	p.Ile32Ile	View
C	T	6361	ORF1ab	6361C>T	p.Asp2032Asp	View
T	C	21567	S	21567T>C	p.Phe2Ser	View
G	C	25595	ORF3a	25595G>C	p.Arg68Thr	View
G	A	12331	ORF1ab	12331G>A	p.Arg4022Arg	View
C	T	17977	ORF1ab	17977C>T	p.Leu5905Phe	View
G	T	28403	N	28403G>T	p.Gly44Cys	View
T	C	19104	ORF1ab	19104T>C	p.Pro6280Pro	View
C	T	25587	ORF3a	25587C>T	p.Leu65Leu	View
C	T	6861	ORF1ab	6861C>T	p.Ala2199Val	View
G	T	7751	ORF1ab	7751G>T	p.Val2496Leu	View
C	T	12786	ORF1ab	12786C>T	p.Thr4174Ile	View
A	T	4883	ORF1ab	4883A>T	p.Asn1540Tyr	View
A	G	7548	ORF1ab	7548A>G	p.Asn2428Ser	View
T	C	820	ORF1ab	820T>C	p.Tyr185Tyr	View
T	C	27682	ORF7a	27682T>C	p.Tyr97His	View
C	T	6347	ORF1ab	6347C>T	p.Leu2028Leu	View
T	C	18672	ORF1ab	18672T>C	p.Asp6136Asp	View
A	G	20279	ORF1ab	20279A>G	p.Glu6672Gly	View
G	A	23242	S	23242G>A	p.Leu560Leu	View
G	T	29825	S	29825G>T		View
C	T	1917	ORF1ab	1917C>T	p.Thr551Ile	View
T	C	13706	ORF1ab	13706T>C	p.Leu4481Ser	View
G	T	20208	ORF1ab	20208G>T	p.Gln6648His	View
A	C	1139	ORF1ab	1139A>C	p.Lys292Gln	View
T	C	1936	ORF1ab	1936T>C	p.Asn557Asn	View
G	T	8264	ORF1ab	8264G>T	p.Gly2667Cys	View
G	T	10996	ORF1ab	10996G>T	p.Lys3577Asn	View
C	T	12068	ORF1ab	12068C>T	p.Leu3935Leu	View
C	T	15615	ORF1ab	15615C>T	p.His5117His	View
C	T	17747	ORF1ab	17747C>T	p.Pro5828Leu	View
T	G	19389	ORF1ab	19389T>G	p.Ser6375Arg	View
C	T	23533	S	23533C>T	p.Asn657Asn	View
C	T	26060	ORF3a	26060C>T	p.Thr223Ile	View
C	T	27500	ORF7a	27500C>T	p.Ser36Phe	View
C	T	28453	N	28453C>T	p.Gly60Gly	View
G	T	29781	S	29781G>T		View
A	G	8020	ORF1ab	8020A>G	p.Glu2585Glu	View
C	T	16877	ORF1ab	16877C>T	p.Thr5538Ile	View
C	T	27999	ORF8	27999C>T	p.Pro36Ser	View
C	T	1093	ORF1ab	1093C>T	p.Pro276Pro	View
G	T	26814	M	26814G>T	p.Ala98Ser	View
G	T	28001	ORF8	28001G>T	p.Pro36Pro	View
C	T	28462	N	28462C>T	p.Asp63Asp	View
G	A	29254	N	29254G>A	p.Ser327Ser	View
C	A	6312	ORF1ab	6312C>A	p.Thr2016Lys	View
T	C	7621	ORF1ab	7621T>C	p.Cys2452Cys	View
C	T	13730	ORF1ab	13730C>T	p.Ala4489Val	View
C	T	23929	S	23929C>T	p.Tyr789Tyr	View
A	C	3180	ORF1ab	3180A>C	p.Glu972Ala	View
C	T	367	ORF1ab	367C>T	p.Ser34Ser	View
G	A	27461	ORF7a	27461G>A	p.Cys23Tyr	View
A	G	27894	ORF8	27894A>G	p.Met1?	View
C	T	28256	ORF8	28256C>T	p.Ile121Ile	View
A	G	4049	ORF1ab	4049A>G	p.Asn1262Asp	View
A	T	6411	ORF1ab	6411A>T	p.Glu2049Val	View
T	C	7122	ORF1ab	7122T>C	p.Ile2286Thr	View
T	C	9964	ORF1ab	9964T>C	p.His3233His	View
C	A	18557	ORF1ab	18557C>A	p.Thr6098Lys	View
C	T	22480	S	22480C>T	p.Phe306Phe	View
A	G	3461	ORF1ab	3461A>G	p.Lys1066Glu	View
A	G	6139	ORF1ab	6139A>G	p.Thr1958Thr	View
C	T	9169	ORF1ab	9169C>T	p.Tyr2968Tyr	View
C	T	5100	ORF1ab	5100C>T	p.Ser1612Leu	View
G	T	27870	ORF7b	27870G>T	p.Glu39*	View
C	T	1780	ORF1ab	1780C>T	p.Ser505Ser	View
G	T	1942	ORF1ab	1942G>T	p.Val559Val	View
C	G	6990	ORF1ab	6990C>G	p.Ser2242Cys	View
C	T	8668	ORF1ab	8668C>T	p.Asp2801Asp	View
G	A	12160	ORF1ab	12160G>A	p.Glu3965Glu	View
C	T	16163	ORF1ab	16163C>T	p.Thr5300Ile	View
G	T	22131	S	22131G>T	p.Arg190Met	View
C	T	28748	N	28748C>T	p.Leu159Leu	View
C	T	12488	ORF1ab	12488C>T	p.Pro4075Ser	View
G	T	17533	ORF1ab	17533G>T	p.Gly5757Cys	View
T	C	23255	S	23255T>C	p.Phe565Leu	View
C	T	25626	ORF3a	25626C>T	p.His78His	View
T	C	3710	ORF1ab	3710T>C	p.Leu1149Leu	View
C	T	29774	S	29774C>T		View
A	G	4269	ORF1ab	4269A>G	p.Asn1335Ser	View
A	G	5852	ORF1ab	5852A>G	p.Ile1863Val	View
C	T	12708	ORF1ab	12708C>T	p.Ala4148Val	View
T	C	23281	S	23281T>C	p.Thr573Thr	View
G	T	25244	S	25244G>T	p.Val1228Leu	View
C	T	27143	M	27143C>T	p.Asn207Asn	View
G	A	9086	ORF1ab	9086G>A	p.Gly2941Ser	View
G	T	17122	ORF1ab	17122G>T	p.Ala5620Ser	View
C	T	8247	ORF1ab	8247C>T	p.Ser2661Phe	View
T	C	18173	ORF1ab	18173T>C	p.Ile5970Thr	View
T	C	1851	ORF1ab	1851T>C	p.Ile529Thr	View
G	C	26730	M	26730G>C	p.Val70Leu	View
G	A	3527	ORF1ab	3527G>A	p.Asp1088Asn	View
G	A	5015	ORF1ab	5015G>A	p.Val1584Met	View
A	G	5877	ORF1ab	5877A>G	p.Asn1871Ser	View
G	T	8017	ORF1ab	8017G>T	p.Ala2584Ala	View
C	T	10277	ORF1ab	10277C>T	p.Leu3338Phe	View
C	T	11008	ORF1ab	11008C>T	p.His3581His	View
C	T	17850	ORF1ab	17850C>T	p.Gly5862Gly	View
C	T	20283	ORF1ab	20283C>T	p.Phe6673Phe	View
C	T	27434	ORF7a	27434C>T	p.Thr14Ile	View
C	A	27454	ORF7a	27454C>A	p.Gln21Lys	View
C	T	27998	ORF8	27998C>T	p.Asp35Asp	View
A	G	26435	E	26435A>G	p.Asn64Ser	View
C	T	589	ORF1ab	589C>T	p.Val108Val	View
C	T	4633	ORF1ab	4633C>T	p.Gly1456Gly	View
T	C	8365	ORF1ab	8365T>C	p.Asn2700Asn	View
C	T	19875	ORF1ab	19875C>T	p.Ile6537Ile	View
C	T	19972	ORF1ab	19972C>T	p.Pro6570Ser	View
C	T	25231	S	25231C>T	p.Gly1223Gly	View
C	T	25276	S	25276C>T	p.Thr1238Thr	View
C	T	25688	ORF3a	25688C>T	p.Ala99Val	View
G	C	28242	ORF8	28242G>C	p.Val117Leu	View
T	C	28735	N	28735T>C	p.Asn154Asn	View
C	T	3583	ORF1ab	3583C>T	p.Ser1106Ser	View
C	T	10376	ORF1ab	10376C>T	p.Pro3371Ser	View
C	T	13517	ORF1ab	13517C>T	p.Thr4418Ile	View
G	T	27632	ORF7a	27632G>T	p.Arg80Ile	View
T	G	243	ORF1ab	243T>G		View
C	A	6437	ORF1ab	6437C>A	p.Gln2058Lys	View
A	C	21783	S	21783A>C	p.Asn74Thr	View
C	T	2197	ORF1ab	2197C>T	p.Asp644Asp	View
G	T	4720	ORF1ab	4720G>T	p.Ala1485Ala	View
C	T	6145	ORF1ab	6145C>T	p.Phe1960Phe	View
T	C	20661	ORF1ab	20661T>C	p.Ser6799Ser	View
C	T	29386	N	29386C>T	p.Asp371Asp	View
A	C	10880	ORF1ab	10880A>C	p.Met3539Leu	View
T	C	15432	ORF1ab	15432T>C	p.Ser5056Ser	View
A	G	16609	ORF1ab	16609A>G	p.Thr5449Ala	View
C	T	19160	ORF1ab	19160C>T	p.Ser6299Phe	View
C	T	23601	S	23601C>T	p.Ser680Phe	View
C	T	25214	S	25214C>T	p.Leu1218Leu	View
A	G	4233	ORF1ab	4233A>G	p.Asp1323Gly	View
C	T	7851	ORF1ab	7851C>T	p.Ala2529Val	View
T	C	10309	ORF1ab	10309T>C	p.Cys3348Cys	View
C	T	6813	ORF1ab	6813C>T	p.Thr2183Ile	View
A	G	21900	S	21900A>G	p.Lys113Arg	View
C	T	28754	N	28754C>T	p.Leu161Phe	View
C	T	17440	ORF1ab	17440C>T	p.Pro5726Ser	View
A	G	21258	ORF1ab	21258A>G	p.Ser6998Ser	View
G	C	25647	ORF3a	25647G>C	p.Leu85Phe	View
A	T	28815	N	28815A>T	p.Gln181Leu	View
G	A	29427	N	29427G>A	p.Arg385Lys	View
C	T	11095	ORF1ab	11095C>T	p.Ala3610Ala	View
G	A	21893	S	21893G>A	p.Asp111Asn	View
A	G	29653	ORF10	29653A>G	p.Val32Val	View
G	T	2035	ORF1ab	2035G>T	p.Leu590Phe	View
C	T	17750	ORF1ab	17750C>T	p.Ala5829Val	View
C	T	25427	ORF3a	25427C>T	p.Thr12Ile	View
C	T	678	ORF1ab	678C>T	p.Ala138Val	View
C	A	24374	S	24374C>A	p.Leu938Ile	View
G	A	2095	ORF1ab	2095G>A	p.Ser610Ser	View
C	T	6606	ORF1ab	6606C>T	p.Ser2114Phe	View
A	G	6705	ORF1ab	6705A>G	p.Asn2147Ser	View
T	C	6718	ORF1ab	6718T>C	p.Ser2151Ser	View
A	G	15489	ORF1ab	15489A>G	p.Gly5075Gly	View
C	T	3874	ORF1ab	3874C>T	p.Ile1203Ile	View
A	G	4219	ORF1ab	4219A>G	p.Arg1318Arg	View
C	T	6990	ORF1ab	6990C>T	p.Ser2242Phe	View
C	T	8092	ORF1ab	8092C>T	p.Leu2609Leu	View
C	T	21588	S	21588C>T	p.Pro9Leu	View
C	T	313	ORF1ab	313C>T	p.Leu16Leu	View
A	G	5428	ORF1ab	5428A>G	p.Thr1721Thr	View
C	T	6433	ORF1ab	6433C>T	p.Thr2056Thr	View
G	T	8371	ORF1ab	8371G>T	p.Gln2702His	View
C	T	10186	ORF1ab	10186C>T	p.Cys3307Cys	View
G	T	21518	ORF1ab	21518G>T	p.Arg7085Ile	View
A	G	23720	S	23720A>G	p.Ile720Val	View
G	A	1738	ORF1ab	1738G>A	p.Val491Val	View
C	T	2121	ORF1ab	2121C>T	p.Thr619Ile	View
A	G	6592	ORF1ab	6592A>G	p.Lys2109Lys	View
C	T	6636	ORF1ab	6636C>T	p.Thr2124Ile	View
G	A	21746	S	21746G>A	p.Val62Ile	View
T	A	23389	S	23389T>A	p.Ala609Ala	View
T	C	23713	S	23713T>C	p.Asn717Asn	View
G	T	24000	S	24000G>T	p.Ser813Ile	View
G	A	28541	N	28541G>A	p.Ala90Thr	View
T	A	2217	ORF1ab	2217T>A	p.Phe651Tyr	View
A	G	2368	ORF1ab	2368A>G	p.Lys701Lys	View
C	T	5365	ORF1ab	5365C>T	p.Tyr1700Tyr	View
T	C	15597	ORF1ab	15597T>C	p.Tyr5111Tyr	View
T	C	18897	ORF1ab	18897T>C	p.Phe6211Phe	View
G	T	21724	S	21724G>T	p.Leu54Phe	View
C	T	23893	S	23893C>T	p.Asn777Asn	View
T	C	26498	M	26498T>C		View
T	A	29021	N	29021T>A	p.Ser250Thr	View
C	T	2156	ORF1ab	2156C>T	p.Leu631Phe	View
G	T	8258	ORF1ab	8258G>T	p.Val2665Phe	View
G	A	27561	ORF7a	27561G>A	p.Leu56Leu	View
T	C	27875	ORF7b	27875T>C	p.Thr40Thr	View
A	G	27985	ORF8	27985A>G	p.Tyr31Cys	View
C	T	5575	ORF1ab	5575C>T	p.Tyr1770Tyr	View
G	A	16269	ORF1ab	16269G>A	p.Gln5335Gln	View
G	A	25644	ORF3a	25644G>A	p.Leu84Leu	View
C	T	27059	M	27059C>T	p.Tyr179Tyr	View
T	C	7618	ORF1ab	7618T>C	p.Asn2451Asn	View
C	T	8888	ORF1ab	8888C>T	p.Arg2875Cys	View
G	T	25538	ORF3a	25538G>T	p.Gly49Val	View
A	G	27633	ORF7a	27633A>G	p.Arg80Arg	View
C	T	37	ORF1ab	37C>T		View
G	T	17721	ORF1ab	17721G>T	p.Val5819Val	View
G	A	27047	M	27047G>A	p.Thr175Thr	View
C	T	19484	ORF1ab	19484C>T	p.Ala6407Val	View
T	C	28196	ORF8	28196T>C	p.Arg101Arg	View
G	A	10751	ORF1ab	10751G>A	p.Val3496Met	View
G	T	24794	S	24794G>T	p.Ala1078Ser	View
C	A	28310	N	28310C>A	p.Pro13Thr	View
C	T	28399	N	28399C>T	p.Pro42Pro	View
G	A	4510	ORF1ab	4510G>A	p.Val1415Val	View
G	A	19480	ORF1ab	19480G>A	p.Gly6406Ser	View
G	T	21193	ORF1ab	21193G>T	p.Asp6977Tyr	View
C	T	24358	S	24358C>T	p.Gly932Gly	View
G	T	27827	ORF7b	27827G>T	p.Met24Ile	View
C	T	6730	ORF1ab	6730C>T	p.Asn2155Asn	View
T	C	13273	ORF1ab	13273T>C	p.His4336His	View
A	G	14125	ORF1ab	14125A>G	p.Ser4621Gly	View
C	A	15960	ORF1ab	15960C>A	p.Ala5232Ala	View
C	T	16323	ORF1ab	16323C>T	p.Cys5353Cys	View
G	T	25396	ORF3a	25396G>T	p.Asp2Tyr	View
C	T	3487	ORF1ab	3487C>T	p.Ala1074Ala	View
T	A	29820	S	29820T>A		View
C	T	7029	ORF1ab	7029C>T	p.Ser2255Phe	View
C	T	25096	S	25096C>T	p.Asn1178Asn	View
C	T	29743	S	29743C>T		View
T	A	11110	ORF1ab	11110T>A	p.Ala3615Ala	View
T	C	559	ORF1ab	559T>C	p.Gly98Gly	View
C	T	7518	ORF1ab	7518C>T	p.Ala2418Val	View
C	T	10893	ORF1ab	10893C>T	p.Thr3543Ile	View
T	C	17007	ORF1ab	17007T>C	p.Asn5581Asn	View
G	A	1043	ORF1ab	1043G>A	p.Ala260Thr	View
C	T	13011	ORF1ab	13011C>T	p.Thr4249Ile	View
T	C	25580	ORF3a	25580T>C	p.Ile63Thr	View
C	T	25611	ORF3a	25611C>T	p.Leu73Leu	View
G	T	20995	ORF1ab	20995G>T	p.Gly6911Cys	View
G	T	17427	ORF1ab	17427G>T	p.Val5721Val	View
C	T	26922	M	26922C>T	p.Leu134Leu	View
T	C	10411	ORF1ab	10411T>C	p.Asn3382Asn	View
C	T	2091	ORF1ab	2091C>T	p.Thr609Ile	View
A	C	4106	ORF1ab	4106A>C	p.Lys1281Gln	View
T	C	5577	ORF1ab	5577T>C	p.Met1771Thr	View
G	A	8540	ORF1ab	8540G>A	p.Ala2759Thr	View
T	C	9435	ORF1ab	9435T>C	p.Val3057Ala	View
T	G	11573	ORF1ab	11573T>G	p.Phe3770Val	View
T	C	13216	ORF1ab	13216T>C	p.Asp4317Asp	View
C	T	25792	ORF3a	25792C>T	p.Arg134Cys	View
G	A	16089	ORF1ab	16089G>A	p.Leu5275Leu	View
C	T	17762	ORF1ab	17762C>T	p.Ala5833Val	View
C	T	22624	S	22624C>T	p.Asn354Asn	View
A	T	7024	ORF1ab	7024A>T	p.Leu2253Phe	View
T	C	24091	S	24091T>C	p.Asp843Asp	View
C	T	24334	S	24334C>T	p.Ala924Ala	View
C	T	24134	S	24134C>T	p.Leu858Phe	View
A	G	3175	ORF1ab	3175A>G	p.Gln970Gln	View
C	T	5548	ORF1ab	5548C>T	p.Thr1761Thr	View
G	A	23624	S	23624G>A	p.Ala688Thr	View
C	T	5849	ORF1ab	5849C>T	p.Pro1862Ser	View
T	C	16050	ORF1ab	16050T>C	p.Thr5262Thr	View
G	T	19414	ORF1ab	19414G>T	p.Val6384Leu	View
C	T	6781	ORF1ab	6781C>T	p.Phe2172Phe	View
G	T	27857	ORF7b	27857G>T	p.Leu34Leu	View
G	T	28307	N	28307G>T	p.Ala12Ser	View
G	A	29736	S	29736G>A		View
C	T	9803	ORF1ab	9803C>T	p.Leu3180Leu	View
T	C	14034	ORF1ab	14034T>C	p.Asn4590Asn	View
G	T	14335	ORF1ab	14335G>T	p.Val4691Phe	View
T	C	16392	ORF1ab	16392T>C	p.Ala5376Ala	View
C	T	7224	ORF1ab	7224C>T	p.Ala2320Val	View
C	T	9286	ORF1ab	9286C>T	p.Asn3007Asn	View
T	G	12620	ORF1ab	12620T>G	p.Ser4119Ala	View
C	A	24759	S	24759C>A	p.Thr1066Asn	View
G	T	26779	M	26779G>T	p.Cys86Phe	View
C	T	26936	M	26936C>T	p.Leu138Leu	View
C	T	3511	ORF1ab	3511C>T	p.Ala1082Ala	View
C	T	3811	ORF1ab	3811C>T	p.Leu1182Leu	View
G	T	12817	ORF1ab	12817G>T	p.Leu4184Leu	View
C	T	29520	N	29520C>T	p.Ser416Leu	View
T	C	6262	ORF1ab	6262T>C	p.Asn1999Asn	View
A	G	6371	ORF1ab	6371A>G	p.Met2036Val	View
G	A	11771	ORF1ab	11771G>A	p.Asp3836Asn	View
C	T	25339	S	25339C>T	p.Asp1259Asp	View
T	A	27451	ORF7a	27451T>A	p.Tyr20Asn	View
A	T	15345	ORF1ab	15345A>T	p.Ser5027Ser	View
C	T	22883	S	22883C>T	p.Leu441Phe	View
T	C	27134	M	27134T>C	p.Tyr204Tyr	View
G	T	28857	N	28857G>T	p.Arg195Ile	View
C	T	28054	ORF8	28054C>T	p.Ser54Leu	View
T	C	3952	ORF1ab	3952T>C	p.Asp1229Asp	View
A	G	9241	ORF1ab	9241A>G	p.Ser2992Ser	View
G	T	15906	ORF1ab	15906G>T	p.Gln5214His	View
C	T	16952	ORF1ab	16952C>T	p.Thr5563Ile	View
G	T	24257	S	24257G>T	p.Ala899Ser	View
G	T	3994	ORF1ab	3994G>T	p.Leu1243Leu	View
C	T	6196	ORF1ab	6196C>T	p.Pro1977Pro	View
C	T	10894	ORF1ab	10894C>T	p.Thr3543Thr	View
C	T	29249	N	29249C>T	p.Pro326Ser	View
A	G	4356	ORF1ab	4356A>G	p.Lys1364Arg	View
G	A	24197	S	24197G>A	p.Ala879Thr	View
G	C	24893	S	24893G>C	p.Glu1111Gln	View
G	T	3939	ORF1ab	3939G>T	p.Arg1225Ile	View
A	T	12234	ORF1ab	12234A>T	p.Glu3990Val	View
C	T	28391	N	28391C>T	p.Arg40Cys	View
G	T	29648	ORF10	29648G>T	p.Asp31Tyr	View
C	T	4551	ORF1ab	4551C>T	p.Thr1429Ile	View
C	T	6664	ORF1ab	6664C>T	p.Val2133Val	View
C	T	17822	ORF1ab	17822C>T	p.Pro5853Leu	View
C	T	19512	ORF1ab	19512C>T	p.Tyr6416Tyr	View
G	A	20398	ORF1ab	20398G>A	p.Glu6712Lys	View
C	T	22570	S	22570C>T	p.Cys336Cys	View
T	G	23599	S	23599T>G	p.Asn679Lys	View
G	C	24977	S	24977G>C	p.Asp1139His	View
C	A	25609	ORF3a	25609C>A	p.Leu73Ile	View
G	T	29701	S	29701G>T		View
C	A	1528	ORF1ab	1528C>A	p.Ala421Ala	View
C	T	2594	ORF1ab	2594C>T	p.Pro777Ser	View
C	T	12081	ORF1ab	12081C>T	p.Ala3939Val	View
C	T	13138	ORF1ab	13138C>T	p.Ile4291Ile	View
G	T	25598	ORF3a	25598G>T	p.Trp69Leu	View
G	A	12662	ORF1ab	12662G>A	p.Ala4133Thr	View
G	A	1598	ORF1ab	1598G>A	p.Gly445Ser	View
C	A	9170	ORF1ab	9170C>A	p.Leu2969Ile	View
C	T	20544	ORF1ab	20544C>T	p.Ser6760Ser	View
C	T	18681	ORF1ab	18681C>T	p.Ala6139Ala	View
C	T	25572	ORF3a	25572C>T	p.Ser60Ser	View
A	C	25573	ORF3a	25573A>C	p.Lys61Gln	View
A	T	25574	ORF3a	25574A>T	p.Lys61Ile	View
G	T	4963	ORF1ab	4963G>T	p.Arg1566Ser	View
G	T	16075	ORF1ab	16075G>T	p.Asp5271Tyr	View
G	T	25660	ORF3a	25660G>T	p.Val90Phe	View
C	T	27532	ORF7a	27532C>T	p.His47Tyr	View
T	C	5124	ORF1ab	5124T>C	p.Val1620Ala	View
T	A	7348	ORF1ab	7348T>A	p.Asn2361Lys	View
C	T	9561	ORF1ab	9561C>T	p.Ser3099Leu	View
C	T	13119	ORF1ab	13119C>T	p.Ala4285Val	View
A	G	18682	ORF1ab	18682A>G	p.Thr6140Ala	View
T	C	19964	ORF1ab	19964T>C	p.Ile6567Thr	View
C	T	29353	N	29353C>T	p.Tyr360Tyr	View
C	T	29363	N	29363C>T	p.Pro364Ser	View
C	T	29514	N	29514C>T	p.Ala414Val	View
A	G	2500	ORF1ab	2500A>G	p.Glu745Glu	View
G	T	8653	ORF1ab	8653G>T	p.Met2796Ile	View
G	A	14999	ORF1ab	14999G>A	p.Ser4912Asn	View
C	G	21622	S	21622C>G	p.Thr20Thr	View
G	T	23749	S	23749G>T	p.Val729Val	View
C	T	26058	ORF3a	26058C>T	p.Asp222Asp	View
C	T	14053	ORF1ab	14053C>T	p.Leu4597Leu	View
A	G	28967	N	28967A>G	p.Ser232Gly	View
C	T	3261	ORF1ab	3261C>T	p.Thr999Ile	View
C	T	3486	ORF1ab	3486C>T	p.Ala1074Val	View
C	T	4202	ORF1ab	4202C>T	p.Leu1313Leu	View
T	C	7048	ORF1ab	7048T>C	p.Ser2261Ser	View
C	T	9866	ORF1ab	9866C>T	p.Leu3201Phe	View
A	G	13369	ORF1ab	13369A>G	p.Thr4368Thr	View
T	C	24763	S	24763T>C	p.Tyr1067Tyr	View
C	T	4099	ORF1ab	4099C>T	p.Phe1278Phe	View
A	T	4291	ORF1ab	4291A>T	p.Ala1342Ala	View
C	T	18828	ORF1ab	18828C>T	p.Val6188Val	View
T	C	24376	S	24376T>C	p.Leu938Leu	View
G	T	29737	S	29737G>T		View
A	G	1197	ORF1ab	1197A>G	p.Glu311Gly	View
G	A	1397	ORF1ab	1397G>A	p.Val378Ile	View
C	T	6027	ORF1ab	6027C>T	p.Pro1921Leu	View
G	A	13183	ORF1ab	13183G>A	p.Gln4306Gln	View
G	A	18180	ORF1ab	18180G>A	p.Lys5972Lys	View
G	T	25726	ORF3a	25726G>T	p.Val112Phe	View
C	T	11300	ORF1ab	11300C>T	p.Leu3679Leu	View
G	T	21255	ORF1ab	21255G>T	p.Ala6997Ala	View
G	A	9300	ORF1ab	9300G>A	p.Arg3012Lys	View
C	T	23086	S	23086C>T	p.Tyr508Tyr	View
T	A	1861	ORF1ab	1861T>A	p.Pro532Pro	View
T	C	21601	S	21601T>C	p.Ser13Ser	View
C	T	593	ORF1ab	593C>T	p.His110Tyr	View
A	G	4749	ORF1ab	4749A>G	p.Lys1495Arg	View
C	T	10641	ORF1ab	10641C>T	p.Thr3459Met	View
G	T	21624	S	21624G>T	p.Arg21Ile	View
G	A	5516	ORF1ab	5516G>A	p.Val1751Met	View
C	T	26124	ORF3a	26124C>T	p.Val244Val	View
C	T	29253	N	29253C>T	p.Ser327Leu	View
C	T	745	ORF1ab	745C>T	p.Asn160Asn	View
A	G	3715	ORF1ab	3715A>G	p.Ser1150Ser	View
T	C	3739	ORF1ab	3739T>C	p.Pro1158Pro	View
A	G	10875	ORF1ab	10875A>G	p.Asn3537Ser	View
T	C	11449	ORF1ab	11449T>C	p.Asp3728Asp	View
A	G	18294	ORF1ab	18294A>G	p.Ala6010Ala	View
C	T	29668	ORF10	29668C>T	p.Leu37Leu	View
A	G	866	ORF1ab	866A>G	p.Ile201Val	View
C	T	1009	ORF1ab	1009C>T	p.Ser248Ser	View
C	T	5183	ORF1ab	5183C>T	p.Pro1640Ser	View
G	T	9190	ORF1ab	9190G>T	p.Val2975Val	View
C	T	13176	ORF1ab	13176C>T	p.Thr4304Ile	View
G	A	17623	ORF1ab	17623G>A	p.Ala5787Thr	View
A	G	22193	S	22193A>G	p.Asn211Asp	View
G	A	26199	ORF3a	26199G>A	p.Thr269Thr	View
A	T	28864	N	28864A>T	p.Ser197Ser	View
C	T	3330	ORF1ab	3330C>T	p.Thr1022Ile	View
G	A	4205	ORF1ab	4205G>A	p.Ala1314Thr	View
A	G	19974	ORF1ab	19974A>G	p.Pro6570Pro	View
A	T	25505	ORF3a	25505A>T	p.Gln38Leu	View
C	T	27847	ORF7b	27847C>T	p.Ser31Leu	View
C	T	28826	N	28826C>T	p.Arg185Cys	View
A	G	29357	N	29357A>G	p.Thr362Ala	View
C	A	10776	ORF1ab	10776C>A	p.Pro3504His	View
C	T	823	ORF1ab	823C>T	p.Val186Val	View
G	T	3004	ORF1ab	3004G>T	p.Glu913Asp	View
C	T	22551	S	22551C>T	p.Pro330Leu	View
T	A	3161	ORF1ab	3161T>A	p.Ser966Thr	View
G	A	6461	ORF1ab	6461G>A	p.Val2066Met	View
C	T	18175	ORF1ab	18175C>T	p.Pro5971Ser	View
C	T	11379	ORF1ab	11379C>T	p.Ala3705Val	View
T	C	16059	ORF1ab	16059T>C	p.Pro5265Pro	View
G	C	25166	S	25166G>C	p.Glu1202Gln	View
T	C	6673	ORF1ab	6673T>C	p.Asp2136Asp	View
T	C	99	ORF1ab	99T>C		View
A	G	9238	ORF1ab	9238A>G	p.Arg2991Arg	View
G	T	15652	ORF1ab	15652G>T	p.Asp5130Tyr	View
A	G	18366	ORF1ab	18366A>G	p.Leu6034Leu	View
C	T	1057	ORF1ab	1057C>T	p.Asp264Asp	View
C	T	8713	ORF1ab	8713C>T	p.Val2816Val	View
G	A	11330	ORF1ab	11330G>A	p.Val3689Ile	View
G	T	29715	S	29715G>T		View
C	T	12559	ORF1ab	12559C>T	p.Ile4098Ile	View
C	T	24381	S	24381C>T	p.Ser940Phe	View
T	C	29729	S	29729T>C		View
C	T	7843	ORF1ab	7843C>T	p.Asn2526Asn	View
G	T	3685	ORF1ab	3685G>T	p.Gln1140His	View
G	A	8150	ORF1ab	8150G>A	p.Val2629Ile	View
C	T	11396	ORF1ab	11396C>T	p.Leu3711Phe	View
T	G	14568	ORF1ab	14568T>G	p.Ala4768Ala	View
A	T	23416	S	23416A>T	p.Thr618Thr	View
G	T	529	ORF1ab	529G>T	p.Leu88Leu	View
T	C	12811	ORF1ab	12811T>C	p.Leu4182Leu	View
G	T	17974	ORF1ab	17974G>T	p.Asp5904Tyr	View
T	C	24685	S	24685T>C	p.Asp1041Asp	View
C	T	25624	ORF3a	25624C>T	p.His78Tyr	View
C	T	14932	ORF1ab	14932C>T	p.Leu4890Leu	View
A	G	23539	S	23539A>G	p.Ser659Ser	View
G	T	25720	ORF3a	25720G>T	p.Ala110Ser	View
C	T	7267	ORF1ab	7267C>T	p.Phe2334Phe	View
C	T	18599	ORF1ab	18599C>T	p.Ala6112Val	View
A	G	20379	ORF1ab	20379A>G	p.Gly6705Gly	View
C	T	21727	S	21727C>T	p.Phe55Phe	View
T	C	15069	ORF1ab	15069T>C	p.Asn4935Asn	View
T	C	628	ORF1ab	628T>C	p.Val121Val	View
C	T	15852	ORF1ab	15852C>T	p.Asp5196Asp	View
C	T	24418	S	24418C>T	p.Val952Val	View
C	A	24502	S	24502C>A	p.Ile980Ile	View
C	T	17135	ORF1ab	17135C>T	p.Pro5624Leu	View
A	T	27156	M	27156A>T	p.Ser212Cys	View
C	T	186	ORF1ab	186C>T		View
T	C	17863	ORF1ab	17863T>C	p.Tyr5867His	View
C	T	18570	ORF1ab	18570C>T	p.Leu6102Leu	View
G	A	12355	ORF1ab	12355G>A	p.Gln4030Gln	View
G	A	20352	ORF1ab	20352G>A	p.Gln6696Gln	View
A	G	7097	ORF1ab	7097A>G	p.Ile2278Val	View
C	T	539	ORF1ab	539C>T	p.Leu92Phe	View
C	T	12784	ORF1ab	12784C>T	p.Asn4173Asn	View
G	T	29747	S	29747G>T		View
T	C	145	ORF1ab	145T>C		View
A	G	3959	ORF1ab	3959A>G	p.Ile1232Val	View
T	A	24622	S	24622T>A	p.Ala1020Ala	View
C	T	27625	ORF7a	27625C>T	p.Arg78Cys	View
C	T	4815	ORF1ab	4815C>T	p.Ser1517Phe	View
C	T	15101	ORF1ab	15101C>T	p.Ala4946Val	View
C	T	26625	M	26625C>T	p.Leu35Leu	View
A	G	761	ORF1ab	761A>G	p.Ser166Gly	View
T	C	4195	ORF1ab	4195T>C	p.Thr1310Thr	View
A	G	13328	ORF1ab	13328A>G	p.Thr4355Ala	View
A	G	27579	ORF7a	27579A>G	p.Gln62Gln	View
G	T	28960	N	28960G>T	p.Gln229His	View
T	C	28340	N	28340T>C	p.Ser23Pro	View
C	T	292	ORF1ab	292C>T	p.Asn9Asn	View
A	G	8254	ORF1ab	8254A>G	p.Ile2663Met	View
G	A	9473	ORF1ab	9473G>A	p.Ala3070Thr	View
C	T	16428	ORF1ab	16428C>T	p.Tyr5388Tyr	View
A	T	10268	ORF1ab	10268A>T	p.Asn3335Tyr	View
G	T	11851	ORF1ab	11851G>T	p.Met3862Ile	View
T	C	15156	ORF1ab	15156T>C	p.His4964His	View
A	G	792	ORF1ab	792A>G	p.Glu176Gly	View
A	C	19577	ORF1ab	19577A>C	p.Gln6438Pro	View
C	T	22088	S	22088C>T	p.Leu176Phe	View
C	T	25797	ORF3a	25797C>T	p.Ser135Ser	View
C	T	1519	ORF1ab	1519C>T	p.Asn418Asn	View
T	C	3592	ORF1ab	3592T>C	p.Asn1109Asn	View
T	C	3127	ORF1ab	3127T>C	p.Asp954Asp	View
A	C	11759	ORF1ab	11759A>C	p.Lys3832Gln	View
C	T	180	ORF1ab	180C>T		View
C	T	1392	ORF1ab	1392C>T	p.Ser376Leu	View
C	T	16362	ORF1ab	16362C>T	p.Val5366Val	View
G	A	362	ORF1ab	362G>A	p.Asp33Asn	View
C	T	583	ORF1ab	583C>T	p.Val106Val	View
C	T	5784	ORF1ab	5784C>T	p.Thr1840Ile	View
C	T	8772	ORF1ab	8772C>T	p.Thr2836Ile	View
G	T	21793	S	21793G>T	p.Lys77Asn	View
C	T	4534	ORF1ab	4534C>T	p.Tyr1423Tyr	View
C	T	6317	ORF1ab	6317C>T	p.Pro2018Ser	View
A	T	21631	S	21631A>T	p.Gln23His	View
C	T	25207	S	25207C>T	p.Tyr1215Tyr	View
A	C	7069	ORF1ab	7069A>C	p.Glu2268Asp	View
A	G	7981	ORF1ab	7981A>G	p.Leu2572Leu	View
G	T	8287	ORF1ab	8287G>T	p.Met2674Ile	View
T	C	22615	S	22615T>C	p.Tyr351Tyr	View
T	C	23084	S	23084T>C	p.Tyr508His	View
G	T	26063	ORF3a	26063G>T	p.Gly224Val	View
T	A	451	ORF1ab	451T>A	p.Pro62Pro	View
G	A	3230	ORF1ab	3230G>A	p.Gly989Ser	View
G	C	6373	ORF1ab	6373G>C	p.Met2036Ile	View
C	T	13994	ORF1ab	13994C>T	p.Ala4577Val	View
A	G	16445	ORF1ab	16445A>G	p.Tyr5394Cys	View
C	T	16928	ORF1ab	16928C>T	p.Thr5555Ile	View
C	T	18440	ORF1ab	18440C>T	p.Ser6059Phe	View
A	G	20437	ORF1ab	20437A>G	p.Ser6725Gly	View
T	A	24076	S	24076T>A	p.Gly838Gly	View
G	T	26207	ORF3a	26207G>T	p.Ser272Ile	View
C	T	27689	ORF7a	27689C>T	p.Pro99Leu	View
G	T	28373	N	28373G>T	p.Gly34Trp	View
G	T	29392	N	29392G>T	p.Lys373Asn	View
C	A	2790	ORF1ab	2790C>A	p.Thr842Asn	View
C	T	10956	ORF1ab	10956C>T	p.Ser3564Leu	View
G	T	17443	ORF1ab	17443G>T	p.Ala5727Ser	View
G	A	6166	ORF1ab	6166G>A	p.Val1967Val	View
C	T	21440	ORF1ab	21440C>T	p.Ser7059Phe	View
A	G	28108	ORF8	28108A>G	p.Gln72Arg	View
G	A	545	ORF1ab	545G>A	p.Gly94Ser	View
C	T	18747	ORF1ab	18747C>T	p.Val6161Val	View
A	T	27345	ORF6	27345A>T	p.Lys48Asn	View
A	G	2097	ORF1ab	2097A>G	p.Gln611Arg	View
C	T	14724	ORF1ab	14724C>T	p.Phe4820Phe	View
C	A	29803	S	29803C>A		View
G	A	13984	ORF1ab	13984G>A	p.Val4574Ile	View
T	C	28026	ORF8	28026T>C	p.Trp45Arg	View
C	T	6578	ORF1ab	6578C>T	p.Leu2105Phe	View
T	C	4120	ORF1ab	4120T>C	p.Tyr1285Tyr	View
C	T	7858	ORF1ab	7858C>T	p.Asn2531Asn	View
T	C	4402	ORF1ab	4402T>C	p.Leu1379Leu	View
A	G	23947	S	23947A>G	p.Lys795Lys	View
A	T	24369	S	24369A>T	p.Asp936Val	View
C	T	29451	N	29451C>T	p.Thr393Ile	View
A	G	1987	ORF1ab	1987A>G	p.Ser574Ser	View
A	G	6097	ORF1ab	6097A>G	p.Leu1944Leu	View
A	G	11781	ORF1ab	11781A>G	p.Lys3839Arg	View
G	A	22225	S	22225G>A	p.Ser221Ser	View
C	T	25614	ORF3a	25614C>T	p.Ser74Ser	View
C	T	2143	ORF1ab	2143C>T	p.Pro626Pro	View
T	C	14721	ORF1ab	14721T>C	p.Gly4819Gly	View
T	G	25519	ORF3a	25519T>G	p.Phe43Val	View
C	T	29077	N	29077C>T	p.Tyr268Tyr	View
G	T	26909	M	26909G>T	p.Leu129Leu	View
C	T	3317	ORF1ab	3317C>T	p.Pro1018Ser	View
A	G	17858	ORF1ab	17858A>G	p.Tyr5865Cys	View
C	T	18060	ORF1ab	18060C>T	p.Leu5932Leu	View
A	T	24694	S	24694A>T	p.Gly1044Gly	View
C	T	1722	ORF1ab	1722C>T	p.Ala486Val	View
A	G	1445	ORF1ab	1445A>G	p.Lys394Glu	View
A	G	3660	ORF1ab	3660A>G	p.Lys1132Arg	View
C	T	19325	ORF1ab	19325C>T	p.Pro6354Leu	View
G	T	20006	ORF1ab	20006G>T	p.Gly6581Val	View
C	T	22858	S	22858C>T	p.Cys432Cys	View
T	C	24152	S	24152T>C	p.Leu864Leu	View
A	G	3416	ORF1ab	3416A>G	p.Lys1051Glu	View
T	C	9016	ORF1ab	9016T>C	p.Ala2917Ala	View
C	T	21410	ORF1ab	21410C>T	p.Pro7049Leu	View
C	T	17119	ORF1ab	17119C>T	p.Leu5619Leu	View
G	T	23611	S	23611G>T	p.Arg683Arg	View
G	T	27637	ORF7a	27637G>T	p.Val82Phe	View
A	T	29886	S	29886A>T		View
C	T	4784	ORF1ab	4784C>T	p.Leu1507Phe	View
C	T	24026	S	24026C>T	p.Leu822Phe	View
C	T	25317	S	25317C>T	p.Ser1252Phe	View
A	G	2138	ORF1ab	2138A>G	p.Lys625Glu	View
T	C	21722	S	21722T>C	p.Leu54Leu	View
G	T	1111	ORF1ab	1111G>T	p.Lys282Asn	View
C	T	9598	ORF1ab	9598C>T	p.Tyr3111Tyr	View
T	C	9640	ORF1ab	9640T>C	p.His3125His	View
C	T	13426	ORF1ab	13426C>T	p.Arg4387Arg	View
C	T	20178	ORF1ab	20178C>T	p.Val6638Val	View
T	C	27462	ORF7a	27462T>C	p.Cys23Cys	View
C	A	6286	ORF1ab	6286C>A	p.Thr2007Thr	View
G	T	7798	ORF1ab	7798G>T	p.Lys2511Asn	View
A	G	23312	S	23312A>G	p.Ile584Val	View
G	A	29744	S	29744G>A		View
A	G	8686	ORF1ab	8686A>G	p.Ile2807Met	View
C	T	15654	ORF1ab	15654C>T	p.Asp5130Asp	View
C	T	28146	ORF8	28146C>T	p.Pro85Ser	View
C	T	1684	ORF1ab	1684C>T	p.Ile473Ile	View
C	T	8407	ORF1ab	8407C>T	p.Asn2714Asn	View
C	T	17746	ORF1ab	17746C>T	p.Pro5828Ser	View
G	T	28178	ORF8	28178G>T	p.Leu95Phe	View
C	T	29718	S	29718C>T		View
T	C	18099	ORF1ab	18099T>C	p.Pro5945Pro	View
G	T	25819	ORF3a	25819G>T	p.Ala143Ser	View
G	T	29477	N	29477G>T	p.Asp402Tyr	View
T	C	22156	S	22156T>C	p.Asp198Asp	View
C	T	25515	ORF3a	25515C>T	p.Leu41Leu	View
G	T	14829	ORF1ab	14829G>T	p.Met4855Ile	View
A	G	24838	S	24838A>G	p.Glu1092Glu	View
T	C	25818	ORF3a	25818T>C	p.Asp142Asp	View
C	T	5055	ORF1ab	5055C>T	p.Thr1597Ile	View
G	T	11906	ORF1ab	11906G>T	p.Val3881Leu	View
G	A	13370	ORF1ab	13370G>A	p.Val4369Ile	View
G	A	18615	ORF1ab	18615G>A	p.Leu6117Leu	View
A	G	20059	ORF1ab	20059A>G	p.Ser6599Gly	View
A	G	20323	ORF1ab	20323A>G	p.Ile6687Val	View
T	C	24923	S	24923T>C	p.Phe1121Leu	View
T	C	25316	S	25316T>C	p.Ser1252Pro	View
G	T	3340	ORF1ab	3340G>T	p.Val1025Val	View
G	A	6884	ORF1ab	6884G>A	p.Gly2207Ser	View
C	T	13168	ORF1ab	13168C>T	p.His4301His	View
T	G	28019	ORF8	28019T>G	p.Tyr42*	View
G	T	28908	N	28908G>T	p.Gly212Val	View
C	T	29149	N	29149C>T	p.Ile292Ile	View
C	T	29509	N	29509C>T	p.Ser412Ser	View
C	T	1601	ORF1ab	1601C>T	p.Leu446Phe	View
G	T	4399	ORF1ab	4399G>T	p.Met1378Ile	View
C	T	8481	ORF1ab	8481C>T	p.Pro2739Leu	View
A	C	9453	ORF1ab	9453A>C	p.Tyr3063Ser	View
C	T	11575	ORF1ab	11575C>T	p.Phe3770Phe	View
C	T	12406	ORF1ab	12406C>T	p.Asn4047Asn	View
C	T	19170	ORF1ab	19170C>T	p.Phe6302Phe	View
G	A	19509	ORF1ab	19509G>A	p.Glu6415Glu	View
A	T	25026	S	25026A>T	p.Tyr1155Phe	View
A	G	26927	M	26927A>G	p.Glu135Glu	View
G	A	1944	ORF1ab	1944G>A	p.Arg560His	View
T	C	1978	ORF1ab	1978T>C	p.Asp571Asp	View
C	T	3743	ORF1ab	3743C>T	p.His1160Tyr	View
T	G	5158	ORF1ab	5158T>G	p.Ala1631Ala	View
T	C	6763	ORF1ab	6763T>C	p.Thr2166Thr	View
C	T	16329	ORF1ab	16329C>T	p.Tyr5355Tyr	View
G	T	19117	ORF1ab	19117G>T	p.Ala6285Ser	View
C	T	19154	ORF1ab	19154C>T	p.Thr6297Ile	View
C	T	26882	M	26882C>T	p.Leu120Leu	View
C	A	27297	ORF6	27297C>A	p.Ile32Ile	View
C	T	28377	N	28377C>T	p.Ala35Val	View
G	A	29734	S	29734G>A		View
T	C	9253	ORF1ab	9253T>C	p.Val2996Val	View
A	G	3674	ORF1ab	3674A>G	p.Asn1137Asp	View
A	G	18114	ORF1ab	18114A>G	p.Thr5950Thr	View
C	T	26370	E	26370C>T	p.Tyr42Tyr	View
G	T	29692	S	29692G>T		View
C	T	207	ORF1ab	207C>T		View
T	C	946	ORF1ab	946T>C	p.Gly227Gly	View
G	T	16912	ORF1ab	16912G>T	p.Val5550Leu	View
C	T	27945	ORF8	27945C>T	p.Gln18*	View
C	T	5979	ORF1ab	5979C>T	p.Ser1905Phe	View
C	T	10728	ORF1ab	10728C>T	p.Thr3488Ile	View
C	T	11620	ORF1ab	11620C>T	p.Phe3785Phe	View
G	C	22661	S	22661G>C	p.Val367Leu	View
G	A	25691	ORF3a	25691G>A	p.Gly100Asp	View
A	T	4991	ORF1ab	4991A>T	p.Asn1576Tyr	View
G	T	5300	ORF1ab	5300G>T	p.Ala1679Ser	View
C	T	5581	ORF1ab	5581C>T	p.Gly1772Gly	View
C	T	9778	ORF1ab	9778C>T	p.Ser3171Ser	View
C	T	12241	ORF1ab	12241C>T	p.Asp3992Asp	View
G	A	19150	ORF1ab	19150G>A	p.Ala6296Thr	View
C	T	25703	ORF3a	25703C>T	p.Pro104Leu	View
G	C	28237	ORF8	28237G>C	p.Arg115Pro	View
T	A	4249	ORF1ab	4249T>A	p.Thr1328Thr	View
A	G	17829	ORF1ab	17829A>G	p.Gln5855Gln	View
T	C	21594	S	21594T>C	p.Val11Ala	View
C	T	22716	S	22716C>T	p.Thr385Ile	View
G	T	27990	ORF8	27990G>T	p.Val33Phe	View
C	T	28728	N	28728C>T	p.Ala152Val	View
C	T	690	ORF1ab	690C>T	p.Ser142Leu	View
C	A	2401	ORF1ab	2401C>A	p.His712Gln	View
A	G	10729	ORF1ab	10729A>G	p.Thr3488Thr	View
A	T	10730	ORF1ab	10730A>T	p.Thr3489Ser	View
C	T	14481	ORF1ab	14481C>T	p.His4739His	View
C	T	19602	ORF1ab	19602C>T	p.Asn6446Asn	View
G	A	20011	ORF1ab	20011G>A	p.Val6583Ile	View
C	T	28695	N	28695C>T	p.Thr141Ile	View
C	T	9559	ORF1ab	9559C>T	p.Tyr3098Tyr	View
C	A	22044	S	22044C>A	p.Ser161Tyr	View
T	C	28007	ORF8	28007T>C	p.Pro38Pro	View
C	A	7528	ORF1ab	7528C>A	p.Val2421Val	View
T	C	16563	ORF1ab	16563T>C	p.Ile5433Ile	View
C	T	24919	S	24919C>T	p.Asn1119Asn	View
A	G	9981	ORF1ab	9981A>G	p.Asn3239Ser	View
C	T	12225	ORF1ab	12225C>T	p.Ala3987Val	View
A	G	16431	ORF1ab	16431A>G	p.Leu5389Leu	View
A	G	17709	ORF1ab	17709A>G	p.Pro5815Pro	View
A	G	21203	ORF1ab	21203A>G	p.Lys6980Arg	View
T	C	22391	S	22391T>C	p.Leu277Leu	View
G	A	11944	ORF1ab	11944G>A	p.Gln3893Gln	View
T	C	20512	ORF1ab	20512T>C	p.Leu6750Leu	View
C	T	22806	S	22806C>T	p.Thr415Ile	View
G	T	4975	ORF1ab	4975G>T	p.Val1570Val	View
G	A	5690	ORF1ab	5690G>A	p.Ala1809Thr	View
C	T	26201	ORF3a	26201C>T	p.Thr270Ile	View
C	A	2252	ORF1ab	2252C>A	p.Gln663Lys	View
C	T	6195	ORF1ab	6195C>T	p.Pro1977Leu	View
C	T	3992	ORF1ab	3992C>T	p.Leu1243Leu	View
G	T	14414	ORF1ab	14414G>T	p.Ser4717Ile	View
G	T	22918	S	22918G>T	p.Leu452Leu	View
A	G	28870	N	28870A>G	p.Pro199Pro	View
G	T	28904	N	28904G>T	p.Ala211Ser	View
T	C	7543	ORF1ab	7543T>C	p.Ile2426Ile	View
C	T	13671	ORF1ab	13671C>T	p.Phe4469Phe	View
C	A	18568	ORF1ab	18568C>A	p.Leu6102Ile	View
C	T	23127	S	23127C>T	p.Ala522Val	View
A	T	24774	S	24774A>T	p.Gln1071Leu	View
C	A	26060	ORF3a	26060C>A	p.Thr223Asn	View
C	T	19366	ORF1ab	19366C>T	p.Pro6368Ser	View
T	C	12388	ORF1ab	12388T>C	p.Asp4041Asp	View
G	T	19962	ORF1ab	19962G>T	p.Thr6566Thr	View
A	G	23040	S	23040A>G	p.Gln493Arg	View
C	T	2973	ORF1ab	2973C>T	p.Ala903Val	View
G	T	3880	ORF1ab	3880G>T	p.Glu1205Asp	View
G	T	9805	ORF1ab	9805G>T	p.Leu3180Leu	View
A	G	15165	ORF1ab	15165A>G	p.Leu4967Leu	View
A	C	20599	ORF1ab	20599A>C	p.Ile6779Leu	View
G	T	28371	N	28371G>T	p.Ser33Ile	View
A	G	11533	ORF1ab	11533A>G	p.Arg3756Arg	View
C	T	15352	ORF1ab	15352C>T	p.Leu5030Phe	View
T	C	26424	E	26424T>C	p.Ser60Ser	View
G	C	28364	N	28364G>C	p.Glu31Gln	View
T	C	1344	ORF1ab	1344T>C	p.Leu360Ser	View
G	T	15406	ORF1ab	15406G>T	p.Ala5048Ser	View
C	T	16260	ORF1ab	16260C>T	p.Cys5332Cys	View
A	G	19960	ORF1ab	19960A>G	p.Thr6566Ala	View
A	G	28169	ORF8	28169A>G	p.Glu92Glu	View
G	A	8861	ORF1ab	8861G>A	p.Val2866Met	View
C	A	15019	ORF1ab	15019C>A	p.Leu4919Ile	View
T	C	16617	ORF1ab	16617T>C	p.Thr5451Thr	View
T	C	25467	ORF3a	25467T>C	p.Pro25Pro	View
A	T	29368	N	29368A>T	p.Pro365Pro	View
C	T	92	ORF1ab	92C>T		View
C	T	5866	ORF1ab	5866C>T	p.Phe1867Phe	View
G	A	9751	ORF1ab	9751G>A	p.Lys3162Lys	View
G	T	16853	ORF1ab	16853G>T	p.Gly5530Val	View
C	T	17465	ORF1ab	17465C>T	p.Thr5734Ile	View
G	T	19518	ORF1ab	19518G>T	p.Leu6418Phe	View
C	T	1973	ORF1ab	1973C>T	p.Leu570Leu	View
C	T	3096	ORF1ab	3096C>T	p.Ser944Leu	View
C	A	20313	ORF1ab	20313C>A	p.Ala6683Ala	View
T	C	22312	S	22312T>C	p.Thr250Thr	View
G	T	22801	S	22801G>T	p.Gly413Gly	View
C	T	28000	ORF8	28000C>T	p.Pro36Leu	View
C	T	6472	ORF1ab	6472C>T	p.Thr2069Thr	View
C	T	8802	ORF1ab	8802C>T	p.Thr2846Ile	View
A	G	17577	ORF1ab	17577A>G	p.Glu5771Glu	View
G	T	3065	ORF1ab	3065G>T	p.Gly934Cys	View
C	T	5192	ORF1ab	5192C>T	p.Leu1643Leu	View
A	G	8001	ORF1ab	8001A>G	p.Asp2579Gly	View
G	T	21608	S	21608G>T	p.Val16Phe	View
G	C	22403	S	22403G>C	p.Glu281Gln	View
T	C	10253	ORF1ab	10253T>C	p.Leu3330Leu	View
G	C	25598	ORF3a	25598G>C	p.Trp69Ser	View
A	T	9397	ORF1ab	9397A>T	p.Ser3044Ser	View
C	T	25294	S	25294C>T	p.Leu1244Leu	View
G	T	28287	N	28287G>T	p.Gly5Val	View
A	G	4363	ORF1ab	4363A>G	p.Glu1366Glu	View
T	C	4844	ORF1ab	4844T>C	p.Phe1527Leu	View
T	C	8473	ORF1ab	8473T>C	p.Asn2736Asn	View
G	A	22781	S	22781G>A	p.Val407Ile	View
C	T	23315	S	23315C>T	p.Leu585Phe	View
T	C	24295	S	24295T>C	p.Val911Val	View
A	C	2172	ORF1ab	2172A>C	p.Lys636Thr	View
A	G	24778	S	24778A>G	p.Glu1072Glu	View
C	T	1437	ORF1ab	1437C>T	p.Ser391Phe	View
G	T	3395	ORF1ab	3395G>T	p.Asp1044Tyr	View
G	T	7037	ORF1ab	7037G>T	p.Gly2258Cys	View
G	A	19861	ORF1ab	19861G>A	p.Ala6533Thr	View
T	C	1708	ORF1ab	1708T>C	p.Ser481Ser	View
G	T	25500	ORF3a	25500G>T	p.Pro36Pro	View
T	C	16993	ORF1ab	16993T>C	p.Tyr5577His	View
G	A	29256	N	29256G>A	p.Gly328Glu	View
A	G	8360	ORF1ab	8360A>G	p.Ile2699Val	View
G	A	27632	ORF7a	27632G>A	p.Arg80Lys	View
C	T	2061	ORF1ab	2061C>T	p.Ala599Val	View
G	T	20275	ORF1ab	20275G>T	p.Asp6671Tyr	View
C	A	27855	ORF7b	27855C>A	p.Leu34Met	View
A	G	8380	ORF1ab	8380A>G	p.Lys2705Lys	View
C	T	23435	S	23435C>T	p.His625Tyr	View
G	T	28727	N	28727G>T	p.Ala152Ser	View
A	G	6659	ORF1ab	6659A>G	p.Ser2132Gly	View
T	C	10045	ORF1ab	10045T>C	p.Ala3260Ala	View
C	T	6504	ORF1ab	6504C>T	p.Ala2080Val	View
G	A	11048	ORF1ab	11048G>A	p.Val3595Ile	View
G	T	16416	ORF1ab	16416G>T	p.Val5384Val	View
G	T	625	ORF1ab	625G>T	p.Lys120Asn	View
C	A	2638	ORF1ab	2638C>A	p.Leu791Leu	View
C	A	2644	ORF1ab	2644C>A	p.Ile793Ile	View
C	T	7844	ORF1ab	7844C>T	p.Leu2527Leu	View
T	C	12436	ORF1ab	12436T>C	p.Val4057Val	View
G	T	12685	ORF1ab	12685G>T	p.Gln4140His	View
G	T	14785	ORF1ab	14785G>T	p.Ala4841Ser	View
T	C	24925	S	24925T>C	p.Phe1121Phe	View
A	T	25564	ORF3a	25564A>T	p.Ser58Cys	View
G	A	29717	S	29717G>A		View
T	C	790	ORF1ab	790T>C	p.Arg175Arg	View
T	C	1908	ORF1ab	1908T>C	p.Phe548Ser	View
C	T	2947	ORF1ab	2947C>T	p.Gly894Gly	View
A	G	12075	ORF1ab	12075A>G	p.Asn3937Ser	View
C	T	17474	ORF1ab	17474C>T	p.Thr5737Ile	View
G	T	19816	ORF1ab	19816G>T	p.Val6518Leu	View
T	C	25705	ORF3a	25705T>C	p.Phe105Leu	View
T	A	26465	E	26465T>A	p.Leu74Gln	View
G	T	4006	ORF1ab	4006G>T	p.Lys1247Asn	View
C	T	11606	ORF1ab	11606C>T	p.Leu3781Leu	View
C	T	13381	ORF1ab	13381C>T	p.Val4372Val	View
A	G	19137	ORF1ab	19137A>G	p.Leu6291Leu	View
T	C	26609	M	26609T>C	p.Leu29Leu	View
G	T	29557	ORF10	29557G>T		View
C	T	11455	ORF1ab	11455C>T	p.Ala3730Ala	View
G	A	18651	ORF1ab	18651G>A	p.Glu6129Glu	View
G	T	25593	ORF3a	25593G>T	p.Lys67Asn	View
A	C	20388	ORF1ab	20388A>C	p.Lys6708Asn	View
C	T	22530	S	22530C>T	p.Thr323Ile	View
G	A	22859	S	22859G>A	p.Val433Ile	View
C	T	27406	ORF7a	27406C>T	p.Leu5Phe	View
C	T	2918	ORF1ab	2918C>T	p.Pro885Ser	View
G	T	3323	ORF1ab	3323G>T	p.Val1020Phe	View
T	C	8011	ORF1ab	8011T>C	p.Asp2582Asp	View
T	C	17328	ORF1ab	17328T>C	p.Pro5688Pro	View
G	A	18674	ORF1ab	18674G>A	p.Arg6137Lys	View
A	G	24580	S	24580A>G	p.Thr1006Thr	View
A	G	28860	N	28860A>G	p.Asn196Ser	View
C	T	1076	ORF1ab	1076C>T	p.Pro271Ser	View
G	A	8705	ORF1ab	8705G>A	p.Gly2814Ser	View
A	C	25495	ORF3a	25495A>C	p.Ile35Leu	View
T	G	175	ORF1ab	175T>G		View
G	A	6236	ORF1ab	6236G>A	p.Val1991Ile	View
C	T	16985	ORF1ab	16985C>T	p.Thr5574Ile	View
C	T	8980	ORF1ab	8980C>T	p.Tyr2905Tyr	View
G	A	26262	E	26262G>A	p.Ser6Ser	View
G	T	24040	S	24040G>T	p.Val826Val	View
T	G	17328	ORF1ab	17328T>G	p.Pro5688Pro	View
A	T	17337	ORF1ab	17337A>T	p.Thr5691Thr	View
A	C	17346	ORF1ab	17346A>C	p.Ile5694Ile	View
T	C	21321	ORF1ab	21321T>C	p.Gly7019Gly	View
T	C	24765	S	24765T>C	p.Val1068Ala	View
A	G	949	ORF1ab	949A>G	p.Val228Val	View
G	T	18677	ORF1ab	18677G>T	p.Arg6138Leu	View
G	T	28903	N	28903G>T	p.Met210Ile	View
T	C	6199	ORF1ab	6199T>C	p.Ser1978Ser	View
C	T	25782	ORF3a	25782C>T	p.Cys130Cys	View
T	C	8767	ORF1ab	8767T>C	p.Phe2834Phe	View
G	T	17808	ORF1ab	17808G>T	p.Lys5848Asn	View
G	A	23015	S	23015G>A	p.Gly485Ser	View
T	G	23017	S	23017T>G	p.Gly485Gly	View
T	C	13697	ORF1ab	13697T>C	p.Ile4478Thr	View
T	C	13162	ORF1ab	13162T>C	p.Cys4299Cys	View
C	T	17883	ORF1ab	17883C>T	p.Thr5873Thr	View
C	T	19868	ORF1ab	19868C>T	p.Thr6535Ile	View
C	T	29502	N	29502C>T	p.Ser410Phe	View
C	T	534	ORF1ab	534C>T	p.Ala90Val	View
C	T	29144	N	29144C>T	p.Leu291Leu	View
T	C	4135	ORF1ab	4135T>C	p.Val1290Val	View
C	T	14322	ORF1ab	14322C>T	p.Tyr4686Tyr	View
G	T	28747	N	28747G>T	p.Val158Val	View
G	T	2995	ORF1ab	2995G>T	p.Glu910Asp	View
G	A	5950	ORF1ab	5950G>A	p.Lys1895Lys	View
T	G	10531	ORF1ab	10531T>G	p.Phe3422Leu	View
G	T	21468	ORF1ab	21468G>T	p.Met7068Ile	View
G	A	22988	S	22988G>A	p.Gly476Ser	View
G	T	199	ORF1ab	199G>T		View
C	T	19320	ORF1ab	19320C>T	p.His6352His	View
G	A	28396	N	28396G>A	p.Arg41Arg	View
A	G	25253	S	25253A>G	p.Thr1231Ala	View
G	A	4127	ORF1ab	4127G>A	p.Gly1288Ser	View
T	C	28693	N	28693T>C	p.Asn140Asn	View
G	T	16197	ORF1ab	16197G>T	p.Glu5311Asp	View
A	G	4229	ORF1ab	4229A>G	p.Thr1322Ala	View
C	T	5178	ORF1ab	5178C>T	p.Thr1638Ile	View
C	A	10798	ORF1ab	10798C>A	p.Asp3511Glu	View
C	T	12756	ORF1ab	12756C>T	p.Thr4164Ile	View
C	T	28836	N	28836C>T	p.Ser188Leu	View
A	G	19543	ORF1ab	19543A>G	p.Ile6427Val	View
G	A	4907	ORF1ab	4907G>A	p.Gly1548Ser	View
A	G	6790	ORF1ab	6790A>G	p.Leu2175Leu	View
T	C	22843	S	22843T>C	p.Asp427Asp	View
T	A	27730	ORF7a	27730T>A	p.Cys113Ser	View
C	A	14408	ORF1ab	14408C>A	p.Pro4715His	View
G	T	25784	ORF3a	25784G>T	p.Trp131Leu	View
G	T	26152	ORF3a	26152G>T	p.Gly254*	View
G	T	4300	ORF1ab	4300G>T	p.Val1345Val	View
T	C	23866	S	23866T>C	p.Thr768Thr	View
C	T	15237	ORF1ab	15237C>T	p.His4991His	View
C	T	26622	M	26622C>T	p.Leu34Phe	View
C	T	29367	N	29367C>T	p.Pro365Leu	View
C	T	28419	N	28419C>T	p.Thr49Ile	View
G	T	20102	ORF1ab	20102G>T	p.Ser6613Ile	View
T	C	22261	S	22261T>C	p.Ile233Ile	View
G	C	24328	S	24328G>C	p.Leu922Phe	View
T	C	14508	ORF1ab	14508T>C	p.Asn4748Asn	View
G	T	18948	ORF1ab	18948G>T	p.Leu6228Leu	View
C	T	19961	ORF1ab	19961C>T	p.Thr6566Met	View
G	T	29706	S	29706G>T		View
T	C	20409	ORF1ab	20409T>C	p.Phe6715Phe	View
G	C	29300	N	29300G>C	p.Asp343His	View
T	C	2752	ORF1ab	2752T>C	p.Thr829Thr	View
C	T	8067	ORF1ab	8067C>T	p.Thr2601Ile	View
C	T	8160	ORF1ab	8160C>T	p.Thr2632Ile	View
C	T	15390	ORF1ab	15390C>T	p.His5042His	View
A	G	21131	ORF1ab	21131A>G	p.Gln6956Arg	View
C	T	21721	S	21721C>T	p.Asp53Asp	View
C	T	25603	ORF3a	25603C>T	p.Leu71Leu	View
A	C	28108	ORF8	28108A>C	p.Gln72Pro	View
C	T	29632	ORF10	29632C>T	p.Asn25Asn	View
A	G	9614	ORF1ab	9614A>G	p.Thr3117Ala	View
A	G	12868	ORF1ab	12868A>G	p.Gly4201Gly	View
G	T	1946	ORF1ab	1946G>T	p.Val561Phe	View
A	G	3569	ORF1ab	3569A>G	p.Ser1102Gly	View
A	G	6211	ORF1ab	6211A>G	p.Gly1982Gly	View
A	G	8659	ORF1ab	8659A>G	p.Lys2798Lys	View
T	C	18438	ORF1ab	18438T>C	p.Phe6058Phe	View
T	C	13701	ORF1ab	13701T>C	p.Tyr4479Tyr	View
G	T	18994	ORF1ab	18994G>T	p.Ala6244Ser	View
G	T	4180	ORF1ab	4180G>T	p.Lys1305Asn	View
T	C	10453	ORF1ab	10453T>C	p.Asn3396Asn	View
T	A	5507	ORF1ab	5507T>A	p.Leu1748Met	View
C	T	11962	ORF1ab	11962C>T	p.Leu3899Leu	View
C	T	29666	ORF10	29666C>T	p.Leu37Phe	View
A	G	5553	ORF1ab	5553A>G	p.Lys1763Arg	View
T	A	15276	ORF1ab	15276T>A	p.Pro5004Pro	View
G	T	15982	ORF1ab	15982G>T	p.Val5240Leu	View
G	A	25913	ORF3a	25913G>A	p.Gly174Asp	View
C	A	25941	ORF3a	25941C>A	p.Asp183Glu	View
A	G	17869	ORF1ab	17869A>G	p.Ile5869Val	View
C	T	3369	ORF1ab	3369C>T	p.Thr1035Ile	View
C	T	18261	ORF1ab	18261C>T	p.Ile5999Ile	View
A	G	1236	ORF1ab	1236A>G	p.Asp324Gly	View
G	T	9130	ORF1ab	9130G>T	p.Val2955Val	View
G	C	23580	S	23580G>C	p.Ser673Thr	View
T	C	27319	ORF6	27319T>C	p.Leu40Leu	View
G	A	28487	N	28487G>A	p.Val72Ile	View
C	T	28868	N	28868C>T	p.Pro199Ser	View
A	G	25274	S	25274A>G	p.Thr1238Ala	View
A	G	15379	ORF1ab	15379A>G	p.Ser5039Gly	View
T	A	26446	E	26446T>A	p.Ser68Thr	View
G	T	28083	ORF8	28083G>T	p.Glu64*	View
C	T	5717	ORF1ab	5717C>T	p.His1818Tyr	View
C	T	14821	ORF1ab	14821C>T	p.Pro4853Ser	View
C	T	22295	S	22295C>T	p.His245Tyr	View
A	T	28370	N	28370A>T	p.Ser33Cys	View
A	G	1112	ORF1ab	1112A>G	p.Thr283Ala	View
A	G	5536	ORF1ab	5536A>G	p.Gln1757Gln	View
A	G	12986	ORF1ab	12986A>G	p.Met4241Val	View
C	T	13501	ORF1ab	13501C>T	p.Pro4413Ser	View
G	T	28563	N	28563G>T	p.Gly97Val	View
A	G	7870	ORF1ab	7870A>G	p.Ser2535Ser	View
A	G	8512	ORF1ab	8512A>G	p.Gln2749Gln	View
G	A	20476	ORF1ab	20476G>A	p.Gly6738Ser	View
G	A	2755	ORF1ab	2755G>A	p.Val830Val	View
A	G	15426	ORF1ab	15426A>G	p.Val5054Val	View
A	G	16156	ORF1ab	16156A>G	p.Met5298Val	View
T	C	16461	ORF1ab	16461T>C	p.His5399His	View
G	T	18826	ORF1ab	18826G>T	p.Val6188Phe	View
G	A	19921	ORF1ab	19921G>A	p.Val6553Ile	View
G	T	21593	S	21593G>T	p.Val11Phe	View
C	G	27527	ORF7a	27527C>G	p.Pro45Arg	View
T	C	28933	N	28933T>C	p.Ala220Ala	View
C	T	355	ORF1ab	355C>T	p.Gly30Gly	View
A	T	1163	ORF1ab	1163A>T	p.Ile300Phe	View
C	T	3429	ORF1ab	3429C>T	p.Thr1055Ile	View
C	T	6318	ORF1ab	6318C>T	p.Pro2018Leu	View
G	T	20238	ORF1ab	20238G>T	p.Arg6658Ser	View
G	A	6389	ORF1ab	6389G>A	p.Glu2042Lys	View
G	T	11557	ORF1ab	11557G>T	p.Glu3764Asp	View
G	A	12911	ORF1ab	12911G>A	p.Val4216Ile	View
C	T	12919	ORF1ab	12919C>T	p.Asp4218Asp	View
C	T	20451	ORF1ab	20451C>T	p.Asn6729Asn	View
G	T	25606	ORF3a	25606G>T	p.Ala72Ser	View
A	G	2057	ORF1ab	2057A>G	p.Met598Val	View
G	T	29027	N	29027G>T	p.Ala252Ser	View
G	A	2072	ORF1ab	2072G>A	p.Gly603Ser	View
C	T	16391	ORF1ab	16391C>T	p.Ala5376Val	View
G	T	17964	ORF1ab	17964G>T	p.Met5900Ile	View
C	A	29109	N	29109C>A	p.Pro279Gln	View
C	T	29247	N	29247C>T	p.Thr325Ile	View
T	C	13954	ORF1ab	13954T>C	p.Leu4564Leu	View
A	G	24862	S	24862A>G	p.Thr1100Thr	View
G	A	21724	S	21724G>A	p.Leu54Leu	View
C	T	29750	S	29750C>T		View
C	T	6807	ORF1ab	6807C>T	p.Thr2181Ile	View
C	T	7926	ORF1ab	7926C>T	p.Ala2554Val	View
C	T	9745	ORF1ab	9745C>T	p.Tyr3160Tyr	View
A	G	10111	ORF1ab	10111A>G	p.Gln3282Gln	View
A	G	25985	ORF3a	25985A>G	p.Lys198Arg	View
A	G	2151	ORF1ab	2151A>G	p.Asp629Gly	View
T	C	9668	ORF1ab	9668T>C	p.Leu3135Leu	View
G	A	20033	ORF1ab	20033G>A	p.Arg6590His	View
A	G	10305	ORF1ab	10305A>G	p.Asn3347Ser	View
C	T	10448	ORF1ab	10448C>T	p.Pro3395Ser	View
T	C	16820	ORF1ab	16820T>C	p.Ile5519Thr	View
T	C	6492	ORF1ab	6492T>C	p.Ile2076Thr	View
A	G	6796	ORF1ab	6796A>G	p.Leu2177Leu	View
C	T	10440	ORF1ab	10440C>T	p.Ala3392Val	View
C	T	10815	ORF1ab	10815C>T	p.Ser3517Phe	View
A	G	15596	ORF1ab	15596A>G	p.Tyr5111Cys	View
T	C	19590	ORF1ab	19590T>C	p.Tyr6442Tyr	View
G	T	19684	ORF1ab	19684G>T	p.Val6474Leu	View
A	C	25420	ORF3a	25420A>C	p.Ile10Leu	View
G	T	29513	N	29513G>T	p.Ala414Ser	View
A	G	5424	ORF1ab	5424A>G	p.Lys1720Arg	View
C	A	9615	ORF1ab	9615C>A	p.Thr3117Asn	View
G	T	13849	ORF1ab	13849G>T	p.Gly4529Cys	View
T	C	14853	ORF1ab	14853T>C	p.Phe4863Phe	View
G	T	28237	ORF8	28237G>T	p.Arg115Leu	View
C	T	11563	ORF1ab	11563C>T	p.Cys3766Cys	View
G	T	24821	S	24821G>T	p.Ala1087Ser	View
A	C	29644	ORF10	29644A>C	p.Gln29His	View
C	T	6016	ORF1ab	6016C>T	p.Asn1917Asn	View
C	T	21639	S	21639C>T	p.Pro26Leu	View
C	T	29311	N	29311C>T	p.Phe346Phe	View
C	T	4158	ORF1ab	4158C>T	p.Ala1298Val	View
G	T	10324	ORF1ab	10324G>T	p.Lys3353Asn	View
C	A	26029	ORF3a	26029C>A	p.Gln213Lys	View
T	C	4149	ORF1ab	4149T>C	p.Val1295Ala	View
G	A	7160	ORF1ab	7160G>A	p.Asp2299Asn	View
C	T	17036	ORF1ab	17036C>T	p.Ala5591Val	View
C	A	21622	S	21622C>A	p.Thr20Thr	View
A	G	6217	ORF1ab	6217A>G	p.Lys1984Lys	View
T	C	17763	ORF1ab	17763T>C	p.Ala5833Ala	View
G	T	13082	ORF1ab	13082G>T	p.Ala4273Ser	View
T	C	16794	ORF1ab	16794T>C	p.Arg5510Arg	View
T	G	21571	S	21571T>G	p.Val3Val	View
GTTT	G	21989	S	21989GTTT>G	p.Val143_Tyr144delinsAsp	View
G	A	26709	M	26709G>A	p.Ala63Thr	View
C	A	1915	ORF1ab	1915C>A	p.Arg550Arg	View
G	A	7987	ORF1ab	7987G>A	p.Gln2574Gln	View
A	G	24010	S	24010A>G	p.Ser816Ser	View
G	C	25563	ORF3a	25563G>C	p.Gln57His	View
G	T	27659	ORF7a	27659G>T	p.Arg89Ile	View
C	T	27735	ORF7a	27735C>T	p.Phe114Phe	View
A	C	8651	ORF1ab	8651A>C	p.Met2796Leu	View
G	A	21796	S	21796G>A	p.Arg78Arg	View
C	T	6997	ORF1ab	6997C>T	p.Ile2244Ile	View
G	T	14316	ORF1ab	14316G>T	p.Gln4684His	View
T	C	9901	ORF1ab	9901T>C	p.Asn3212Asn	View
C	T	26527	M	26527C>T	p.Ala2Val	View
C	T	21139	ORF1ab	21139C>T	p.Leu6959Leu	View
G	T	5210	ORF1ab	5210G>T	p.Ala1649Ser	View
A	T	16581	ORF1ab	16581A>T	p.Thr5439Thr	View
T	C	5557	ORF1ab	5557T>C	p.Gly1764Gly	View
C	T	19813	ORF1ab	19813C>T	p.Pro6517Ser	View
G	T	25555	ORF3a	25555G>T	p.Val55Phe	View
T	G	3163	ORF1ab	3163T>G	p.Ser966Ser	View
C	T	23854	S	23854C>T	p.Asn764Asn	View
G	T	2683	ORF1ab	2683G>T	p.Met806Ile	View
C	T	13584	ORF1ab	13584C>T	p.Phe4440Phe	View
A	G	16281	ORF1ab	16281A>G	p.Arg5339Arg	View
G	T	19648	ORF1ab	19648G>T	p.Val6462Leu	View
G	T	22205	S	22205G>T	p.Asp215Tyr	View
G	A	26539	M	26539G>A	p.Gly6Asp	View
A	G	27899	ORF8	27899A>G	p.Lys2Lys	View
T	C	221	ORF1ab	221T>C		View
T	G	3808	ORF1ab	3808T>G	p.Asn1181Lys	View
C	T	6327	ORF1ab	6327C>T	p.Thr2021Ile	View
G	T	11893	ORF1ab	11893G>T	p.Leu3876Phe	View
C	A	23424	S	23424C>A	p.Pro621His	View
C	T	2878	ORF1ab	2878C>T	p.Phe871Phe	View
A	G	6453	ORF1ab	6453A>G	p.Glu2063Gly	View
C	T	8814	ORF1ab	8814C>T	p.Ala2850Val	View
A	G	9019	ORF1ab	9019A>G	p.Glu2918Glu	View
A	G	16725	ORF1ab	16725A>G	p.Leu5487Leu	View
C	T	20428	ORF1ab	20428C>T	p.Pro6722Ser	View
C	T	20703	ORF1ab	20703C>T	p.Tyr6813Tyr	View
G	T	25552	ORF3a	25552G>T	p.Ala54Ser	View
C	T	26151	ORF3a	26151C>T	p.Ser253Ser	View
G	T	28378	N	28378G>T	p.Ala35Ala	View
A	G	28482	N	28482A>G	p.Gln70Arg	View
T	G	14251	ORF1ab	14251T>G	p.Leu4663Val	View
T	C	25272	S	25272T>C	p.Met1237Thr	View
C	T	28312	N	28312C>T	p.Pro13Pro	View
G	T	29773	S	29773G>T		View
C	T	23170	S	23170C>T	p.Asn536Asn	View
A	G	10829	ORF1ab	10829A>G	p.Ile3522Val	View
A	G	10972	ORF1ab	10972A>G	p.Gln306Gln	View
C	T	21597	S	21597C>T	p.Ser12Phe	View
T	C	25333	S	25333T>C	p.Asp1257Asp	View
G	T	28362	N	28362G>T	p.Gly30Val	View
G	T	4904	ORF1ab	4904G>T	p.Asp1547Tyr	View
A	G	8812	ORF1ab	8812A>G	p.Lys2849Lys	View
C	T	629	ORF1ab	629C>T	p.Leu122Phe	View
G	A	1696	ORF1ab	1696G>A	p.Leu477Leu	View
T	C	8278	ORF1ab	8278T>C	p.Asn2671Asn	View
G	A	12661	ORF1ab	12661G>A	p.Arg4132Arg	View
T	C	16950	ORF1ab	16950T>C	p.Pro5562Pro	View
G	T	25970	ORF3a	25970G>T	p.Trp193Leu	View
G	T	26828	M	26828G>T	p.Leu102Leu	View
A	G	3964	ORF1ab	3964A>G	p.Lys1233Lys	View
T	C	6966	ORF1ab	6966T>C	p.Leu2234Ser	View
C	T	11479	ORF1ab	11479C>T	p.Ile3738Ile	View
A	T	20411	ORF1ab	20411A>T	p.Glu6716Val	View
C	T	21145	ORF1ab	21145C>T	p.Leu6961Phe	View
T	C	26978	M	26978T>C	p.Ala152Ala	View
C	T	28115	ORF8	28115C>T	p.Ile74Ile	View
T	C	1390	ORF1ab	1390T>C	p.Asn375Asn	View
C	T	3792	ORF1ab	3792C>T	p.Ala1176Val	View
C	T	6543	ORF1ab	6543C>T	p.Thr2093Ile	View
A	T	20013	ORF1ab	20013A>T	p.Val6583Val	View
G	T	21004	ORF1ab	21004G>T	p.Ala6914Ser	View
G	T	23518	S	23518G>T	p.Gly652Gly	View
T	C	26777	M	26777T>C	p.Ala85Ala	View
A	T	143	ORF1ab	143A>T		View
C	T	3903	ORF1ab	3903C>T	p.Pro1213Leu	View
G	A	12382	ORF1ab	12382G>A	p.Lys4039Lys	View
A	G	22069	S	22069A>G	p.Glu169Glu	View
A	G	12557	ORF1ab	12557A>G	p.Ile4098Val	View
A	G	27359	ORF6	27359A>G	p.Asp53Gly	View
A	G	14940	ORF1ab	14940A>G	p.Lys4892Lys	View
T	C	15922	ORF1ab	15922T>C	p.Tyr5220His	View
G	A	10617	ORF1ab	10617G>A	p.Arg3451Lys	View
C	T	25692	ORF3a	25692C>T	p.Gly100Gly	View
G	A	17079	ORF1ab	17079G>A	p.Gln5605Gln	View
G	A	25906	ORF3a	25906G>A	p.Gly172Ser	View
A	G	18333	ORF1ab	18333A>G	p.Arg6023Arg	View
A	G	20598	ORF1ab	20598A>G	p.Glu6778Glu	View
A	G	23670	S	23670A>G	p.Asn703Ser	View
G	T	11198	ORF1ab	11198G>T	p.Ala3645Ser	View
T	C	12283	ORF1ab	12283T>C	p.Asp4006Asp	View
C	T	7604	ORF1ab	7604C>T	p.Leu2447Leu	View
C	T	10537	ORF1ab	10537C>T	p.Tyr3424Tyr	View
A	G	17861	ORF1ab	17861A>G	p.Asp5866Gly	View
T	C	21673	S	21673T>C	p.Tyr37Tyr	View
T	C	27634	ORF7a	27634T>C	p.Ser81Pro	View
A	C	28097	ORF8	28097A>C	p.Lys68Asn	View
A	G	1715	ORF1ab	1715A>G	p.Thr484Ala	View
A	G	1810	ORF1ab	1810A>G	p.Lys515Lys	View
G	T	5572	ORF1ab	5572G>T	p.Met1769Ile	View
C	T	10474	ORF1ab	10474C>T	p.Phe3403Phe	View
A	G	12644	ORF1ab	12644A>G	p.Ile4127Val	View
T	C	16743	ORF1ab	16743T>C	p.Val5493Val	View
G	T	19086	ORF1ab	19086G>T	p.Lys6274Asn	View
G	T	29690	S	29690G>T		View
C	T	6429	ORF1ab	6429C>T	p.Pro2055Leu	View
C	T	1489	ORF1ab	1489C>T	p.Gly408Gly	View
T	G	2996	ORF1ab	2996T>G	p.Ser911Ala	View
T	G	4054	ORF1ab	4054T>G	p.Leu1263Leu	View
G	T	6349	ORF1ab	6349G>T	p.Leu2028Leu	View
G	T	6885	ORF1ab	6885G>T	p.Gly2207Val	View
G	A	25423	ORF3a	25423G>A	p.Gly11Arg	View
G	C	22104	S	22104G>C	p.Gly181Ala	View
T	A	3967	ORF1ab	3967T>A	p.Ala1234Ala	View
A	G	7003	ORF1ab	7003A>G	p.Ser2246Ser	View
T	C	7258	ORF1ab	7258T>C	p.Tyr2331Tyr	View
C	T	18252	ORF1ab	18252C>T	p.Asn5996Asn	View
G	A	20548	ORF1ab	20548G>A	p.Asp6762Asn	View
T	C	202	ORF1ab	202T>C		View
G	A	8287	ORF1ab	8287G>A	p.Met2674Ile	View
C	T	2334	ORF1ab	2334C>T	p.Ala690Val	View
G	A	13201	ORF1ab	13201G>A	p.Pro4312Pro	View
C	A	28054	ORF8	28054C>A	p.Ser54*	View
G	T	18782	ORF1ab	18782G>T	p.Gly6173Val	View
C	T	29376	N	29376C>T	p.Pro368Leu	View
C	T	904	ORF1ab	904C>T	p.Cys213Cys	View
G	T	12514	ORF1ab	12514G>T	p.Thr4083Thr	View
T	C	1947	ORF1ab	1947T>C	p.Val561Ala	View
G	T	3692	ORF1ab	3692G>T	p.Val1143Phe	View
T	C	9769	ORF1ab	9769T>C	p.Asn3168Asn	View
A	G	12410	ORF1ab	12410A>G	p.Ile4049Val	View
T	C	14961	ORF1ab	14961T>C	p.Asn4899Asn	View
T	A	21832	S	21832T>A	p.Val90Val	View
T	C	27922	ORF8	27922T>C	p.Ile10Thr	View
C	T	27884	ORF7b	27884C>T	p.Ala43Ala	View
A	G	11559	ORF1ab	11559A>G	p.Tyr3765Cys	View
T	A	20600	ORF1ab	20600T>A	p.Ile6779Asn	View
C	T	25886	ORF3a	25886C>T	p.Ser165Phe	View
G	T	26104	ORF3a	26104G>T	p.Asp238Tyr	View
C	T	5301	ORF1ab	5301C>T	p.Ala1679Val	View
C	T	8739	ORF1ab	8739C>T	p.Thr2825Ile	View
C	T	22377	S	22377C>T	p.Pro272Leu	View
C	T	23896	S	23896C>T	p.Thr778Thr	View
G	T	24757	S	24757G>T	p.Val1065Val	View
G	T	29465	N	29465G>T	p.Ala398Ser	View
G	T	29757	S	29757G>T		View
C	T	8016	ORF1ab	8016C>T	p.Ala2584Val	View
C	T	13405	ORF1ab	13405C>T	p.Gly4380Gly	View
G	C	27505	ORF7a	27505G>C	p.Gly38Arg	View
A	G	3559	ORF1ab	3559A>G	p.Lys1098Lys	View
C	A	22033	S	22033C>A	p.Phe157Leu	View
C	T	24023	S	24023C>T	p.Leu821Leu	View
C	T	2358	ORF1ab	2358C>T	p.Ala698Val	View
C	T	20759	ORF1ab	20759C>T	p.Ala6832Val	View
G	A	26660	M	26660G>A	p.Leu46Leu	View
G	A	28658	N	28658G>A	p.Gly129Ser	View
G	T	25699	ORF3a	25699G>T	p.Ala103Ser	View
G	A	8785	ORF1ab	8785G>A	p.Gln2840Gln	View
C	T	26807	M	26807C>T	p.Tyr95Tyr	View
C	T	27879	ORF7b	27879C>T	p.His42Tyr	View
C	A	28821	N	28821C>A	p.Ser183Tyr	View
G	T	29745	S	29745G>T		View
A	G	408	ORF1ab	408A>G	p.Asp48Gly	View
A	T	1064	ORF1ab	1064A>T	p.Asn267Tyr	View
C	T	1387	ORF1ab	1387C>T	p.His374His	View
G	A	5972	ORF1ab	5972G>A	p.Asp1903Asn	View
C	T	7093	ORF1ab	7093C>T	p.Val2276Val	View
T	C	8296	ORF1ab	8296T>C	p.Tyr2677Tyr	View
G	T	21830	S	21830G>T	p.Val90Phe	View
G	T	26730	M	26730G>T	p.Val70Phe	View
G	T	29751	S	29751G>T		View
C	T	3646	ORF1ab	3646C>T	p.Asp1127Asp	View
T	C	5728	ORF1ab	5728T>C	p.Phe1821Phe	View
A	C	26069	ORF3a	26069A>C	p.Glu226Ala	View
G	T	2833	ORF1ab	2833G>T	p.Lys856Asn	View
T	C	13851	ORF1ab	13851T>C	p.Gly4529Gly	View
C	T	12754	ORF1ab	12754C>T	p.Cys4163Cys	View
C	T	22006	S	22006C>T	p.Asn148Asn	View
C	T	1616	ORF1ab	1616C>T	p.Leu451Phe	View
T	C	25662	ORF3a	25662T>C	p.Val90Val	View
G	C	28805	N	28805G>C	p.Gly178Arg	View
G	A	6422	ORF1ab	6422G>A	p.Glu2053Lys	View
T	C	12394	ORF1ab	12394T>C	p.Asp4043Asp	View
T	C	14169	ORF1ab	14169T>C	p.Pro4635Pro	View
T	C	1771	ORF1ab	1771T>C	p.Ile502Ile	View
C	A	10741	ORF1ab	10741C>A	p.Asp3492Glu	View
G	T	14118	ORF1ab	14118G>T	p.Thr4618Thr	View
G	A	17064	ORF1ab	17064G>A	p.Lys5600Lys	View
C	T	17125	ORF1ab	17125C>T	p.Leu5621Phe	View
G	A	21776	S	21776G>A	p.Gly72Arg	View
A	G	24997	S	24997A>G	p.Leu1145Leu	View
C	T	26013	ORF3a	26013C>T	p.Phe207Phe	View
A	C	19949	ORF1ab	19949A>C	p.Lys6562Thr	View
C	T	23240	S	23240C>T	p.Leu560Leu	View
C	T	10809	ORF1ab	10809C>T	p.Pro3515Leu	View
G	T	10334	ORF1ab	10334G>T	p.Ala3357Ser	View
T	C	20827	ORF1ab	20827T>C	p.Leu6855Leu	View
T	C	7474	ORF1ab	7474T>C	p.Gly2403Gly	View
A	G	18360	ORF1ab	18360A>G	p.Leu6032Leu	View
C	T	27612	ORF7a	27612C>T	p.His73His	View
G	A	896	ORF1ab	896G>A	p.Ala211Thr	View
G	T	18891	ORF1ab	18891G>T	p.Glu6209Asp	View
C	T	5974	ORF1ab	5974C>T	p.Asp1903Asp	View
A	G	13888	ORF1ab	13888A>G	p.Asn4542Asp	View
A	G	14748	ORF1ab	14748A>G	p.Glu4828Glu	View
G	A	29235	N	29235G>A	p.Gly321Asp	View
T	C	25159	S	25159T>C	p.Asp1199Asp	View
G	T	29777	S	29777G>T		View
C	T	1469	ORF1ab	1469C>T	p.Arg402Cys	View
C	T	23577	S	23577C>T	p.Ala672Val	View
C	T	26822	M	26822C>T	p.Phe100Phe	View
C	T	6120	ORF1ab	6120C>T	p.Ser1952Leu	View
T	A	6272	ORF1ab	6272T>A	p.Tyr2003Asn	View
T	G	6559	ORF1ab	6559T>G	p.Ala2098Ala	View
C	T	5240	ORF1ab	5240C>T	p.Pro1659Ser	View
C	T	9080	ORF1ab	9080C>T	p.Leu2939Leu	View
C	T	11866	ORF1ab	11866C>T	p.Cys3867Cys	View
C	T	16457	ORF1ab	16457C>T	p.Ser5398Leu	View
G	T	16741	ORF1ab	16741G>T	p.Val5493Phe	View
C	T	17288	ORF1ab	17288C>T	p.Thr5675Ile	View
C	T	23683	S	23683C>T	p.Tyr707Tyr	View
C	A	8127	ORF1ab	8127C>A	p.Ala2621Glu	View
C	T	12084	ORF1ab	12084C>T	p.Thr3940Ile	View
A	T	15398	ORF1ab	15398A>T	p.Tyr5045Phe	View
C	T	19560	ORF1ab	19560C>T	p.Ser6432Ser	View
T	C	21890	S	21890T>C	p.Leu110Leu	View
A	C	24727	S	24727A>C	p.Ser1055Ser	View
C	T	25544	ORF3a	25544C>T	p.Ala51Val	View
C	T	22945	S	22945C>T	p.Leu461Leu	View
T	C	212	ORF1ab	212T>C		View
G	T	1747	ORF1ab	1747G>T	p.Leu494Phe	View
C	T	337	ORF1ab	337C>T	p.Arg24Arg	View
C	T	10401	ORF1ab	10401C>T	p.Ala3379Val	View
G	C	27382	ORF6	27382G>C	p.Asp61His	View
A	T	27383	ORF6	27383A>T	p.Asp61Val	View
G	T	28085	ORF8	28085G>T	p.Glu64Asp	View
A	G	26170	ORF3a	26170A>G	p.Met260Val	View
G	A	7295	ORF1ab	7295G>A	p.Ala2344Thr	View
C	T	17397	ORF1ab	17397C>T	p.Val5711Val	View
G	A	21073	ORF1ab	21073G>A	p.Val6937Ile	View
C	T	29085	N	29085C>T	p.Thr271Ile	View
C	G	29420	N	29420C>G	p.Pro383Ala	View
T	C	3730	ORF1ab	3730T>C	p.Gly1155Gly	View
G	A	13726	ORF1ab	13726G>A	p.Val4488Ile	View
C	A	20178	ORF1ab	20178C>A	p.Val6638Val	View
G	T	10533	ORF1ab	10533G>T	p.Cys3423Phe	View
C	A	6151	ORF1ab	6151C>A	p.Asp1962Glu	View
C	T	23077	S	23077C>T	p.Tyr505Tyr	View
C	A	355	ORF1ab	355C>A	p.Gly30Gly	View
G	T	25252	S	25252G>T	p.Val1230Val	View
G	C	25654	ORF3a	25654G>C	p.Val88Leu	View
G	T	26153	ORF3a	26153G>T	p.Gly254Val	View
C	T	3397	ORF1ab	3397C>T	p.Asp1044Asp	View
G	A	12265	ORF1ab	12265G>A	p.Lys4000Lys	View
A	G	22489	S	22489A>G	p.Glu309Glu	View
C	T	13824	ORF1ab	13824C>T	p.Val4520Val	View
T	C	7375	ORF1ab	7375T>C	p.Asn2370Asn	View
C	T	13944	ORF1ab	13944C>T	p.Asn4560Asn	View
G	A	17280	ORF1ab	17280G>A	p.Val5672Val	View
G	T	17572	ORF1ab	17572G>T	p.Ala5770Ser	View
C	T	18657	ORF1ab	18657C>T	p.Thr6131Thr	View
C	T	20132	ORF1ab	20132C>T	p.Ala6623Val	View
C	T	27393	ORF7a	27393C>T		View
A	G	259	ORF1ab	259A>G		View
A	G	18594	ORF1ab	18594A>G	p.Leu6110Leu	View
G	A	20083	ORF1ab	20083G>A	p.Val6607Ile	View
C	T	3656	ORF1ab	3656C>T	p.Leu1131Phe	View
G	T	22289	S	22289G>T	p.Ala243Ser	View
G	T	29587	ORF10	29587G>T	p.Pro10Pro	View
T	G	1603	ORF1ab	1603T>G	p.Leu446Leu	View
C	T	14362	ORF1ab	14362C>T	p.Leu4700Leu	View
A	G	20935	ORF1ab	20935A>G	p.Thr6891Ala	View
C	T	25466	ORF3a	25466C>T	p.Pro25Leu	View
G	A	28001	ORF8	28001G>A	p.Pro36Pro	View
G	T	28027	ORF8	28027G>T	p.Trp45Leu	View
T	C	87	ORF1ab	87T>C		View
T	A	6979	ORF1ab	6979T>A	p.Val2238Val	View
G	T	24098	S	24098G>T	p.Ala846Ser	View
A	G	9162	ORF1ab	9162A>G	p.Asn2966Ser	View
G	T	21586	S	21586G>T	p.Leu8Phe	View
T	C	22276	S	22276T>C	p.Phe238Phe	View
A	G	11908	ORF1ab	11908A>G	p.Val3881Val	View
C	T	15933	ORF1ab	15933C>T	p.Tyr5223Tyr	View
G	T	16968	ORF1ab	16968G>T	p.Glu5568Asp	View
C	T	28708	N	28708C>T	p.His145His	View
T	C	277	ORF1ab	277T>C	p.Leu4Leu	View
A	T	5545	ORF1ab	5545A>T	p.Thr1760Thr	View
G	A	6881	ORF1ab	6881G>A	p.Val2206Ile	View
C	T	7905	ORF1ab	7905C>T	p.Ser2547Leu	View
A	G	16026	ORF1ab	16026A>G	p.Leu5254Leu	View
G	T	23948	S	23948G>T	p.Asp796Tyr	View
C	T	29642	ORF10	29642C>T	p.Gln29*	View
T	G	505	ORF1ab	505T>G	p.Pro80Pro	View
C	T	7162	ORF1ab	7162C>T	p.Asp2299Asp	View
G	T	22104	S	22104G>T	p.Gly181Val	View
A	G	1639	ORF1ab	1639A>G	p.Lys458Lys	View
G	A	2150	ORF1ab	2150G>A	p.Asp629Asn	View
C	T	3587	ORF1ab	3587C>T	p.His1108Tyr	View
C	T	18264	ORF1ab	18264C>T	p.Thr6000Thr	View
T	G	12011	ORF1ab	12011T>G	p.Ser3916Ala	View
A	G	28370	N	28370A>G	p.Ser33Gly	View
C	T	14931	ORF1ab	14931C>T	p.Asn4889Asn	View
C	G	23457	S	23457C>G	p.Thr632Ser	View
C	T	10789	ORF1ab	10789C>T	p.Asp3508Asp	View
G	T	25456	ORF3a	25456G>T	p.Asp22Tyr	View
C	T	3176	ORF1ab	3176C>T	p.Pro971Ser	View
G	A	4184	ORF1ab	4184G>A	p.Gly1307Ser	View
T	C	4408	ORF1ab	4408T>C	p.His1381His	View
C	A	12455	ORF1ab	12455C>A	p.Leu4064Ile	View
C	T	17483	ORF1ab	17483C>T	p.Thr5740Ile	View
A	T	26864	M	26864A>T	p.Pro114Pro	View
G	T	27916	ORF8	27916G>T	p.Gly8Val	View
C	T	29347	N	29347C>T	p.Asp358Asp	View
G	A	26959	M	26959G>A	p.Arg146His	View
T	C	17886	ORF1ab	17886T>C	p.Thr5874Thr	View
C	T	643	ORF1ab	643C>T	p.Asn126Asn	View
A	T	4860	ORF1ab	4860A>T	p.Asp1532Val	View
G	T	6008	ORF1ab	6008G>T	p.Val1915Leu	View
A	C	15483	ORF1ab	15483A>C	p.Ser5073Ser	View
T	C	15870	ORF1ab	15870T>C	p.His5202His	View
T	C	24622	S	24622T>C	p.Ala1020Ala	View
G	T	25757	ORF3a	25757G>T	p.Arg122Ile	View
A	G	3503	ORF1ab	3503A>G	p.Asn1080Asp	View
T	C	28835	N	28835T>C	p.Ser188Pro	View
G	A	61	ORF1ab	61G>A		View
T	C	847	ORF1ab	847T>C	p.Asp194Asp	View
A	G	2510	ORF1ab	2510A>G	p.Thr749Ala	View
G	T	2764	ORF1ab	2764G>T	p.Val833Val	View
G	T	3251	ORF1ab	3251G>T	p.Asp996Tyr	View
A	G	5353	ORF1ab	5353A>G	p.Gln1696Gln	View
A	G	11451	ORF1ab	11451A>G	p.Gln3729Arg	View
T	C	18132	ORF1ab	18132T>C	p.Thr5956Thr	View
C	T	19374	ORF1ab	19374C>T	p.Phe6370Phe	View
A	G	24373	S	24373A>G	p.Ser937Ser	View
G	T	25839	ORF3a	25839G>T	p.Trp149Cys	View
G	T	27987	ORF8	27987G>T	p.Val32Leu	View
T	A	28862	N	28862T>A	p.Ser197Thr	View
C	T	2146	ORF1ab	2146C>T	p.Val627Val	View
T	C	2233	ORF1ab	2233T>C	p.Ala656Ala	View
C	T	3117	ORF1ab	3117C>T	p.Thr951Ile	View
T	A	7789	ORF1ab	7789T>A	p.Ala2508Ala	View
G	T	19656	ORF1ab	19656G>T	p.Lys6464Asn	View
T	C	22684	S	22684T>C	p.Phe374Phe	View
C	T	22747	S	22747C>T	p.Val395Val	View
C	A	23897	S	23897C>A	p.Gln779Lys	View
C	T	26768	M	26768C>T	p.Ile82Ile	View
C	A	28278	N	28278C>A	p.Ser2Tyr	View
G	T	28884	N	28884G>T	p.Gly204Val	View
T	C	4346	ORF1ab	4346T>C	p.Ser1361Pro	View
C	T	7728	ORF1ab	7728C>T	p.Ser2488Phe	View
C	T	14708	ORF1ab	14708C>T	p.Ala4815Val	View
T	C	8076	ORF1ab	8076T>C	p.Val2604Ala	View
C	T	29679	S	29679C>T		View
T	C	1000	ORF1ab	1000T>C	p.Ser245Ser	View
G	T	29511	N	29511G>T	p.Ser413Ile	View
A	G	2656	ORF1ab	2656A>G	p.Glu797Glu	View
C	T	11779	ORF1ab	11779C>T	p.Phe3838Phe	View
C	T	12973	ORF1ab	12973C>T	p.Asn4236Asn	View
G	T	29195	N	29195G>T	p.Ala308Ser	View
C	T	18814	ORF1ab	18814C>T	p.Leu6184Leu	View
C	T	4234	ORF1ab	4234C>T	p.Asp1323Asp	View
A	G	18039	ORF1ab	18039A>G	p.Gln601Gln	View
G	A	24926	S	24926G>A	p.Val1122Met	View
G	A	3091	ORF1ab	3091G>A	p.Glu942Glu	View
G	T	8572	ORF1ab	8572G>T	p.Trp2769Cys	View
C	T	8991	ORF1ab	8991C>T	p.Ala2909Val	View
G	C	22343	S	22343G>C	p.Gly261Arg	View
C	T	28542	N	28542C>T	p.Ala90Val	View
G	T	19891	ORF1ab	19891G>T	p.Asp6543Tyr	View
C	T	24797	S	24797C>T	p.Pro1079Ser	View
C	T	25638	ORF3a	25638C>T	p.Asn82Asn	View
T	C	5290	ORF1ab	5290T>C	p.Tyr1675Tyr	View
C	A	8318	ORF1ab	8318C>A	p.Pro2685Thr	View
G	T	16365	ORF1ab	16365G>T	p.Leu5367Phe	View
C	T	2910	ORF1ab	2910C>T	p.Thr882Ile	View
T	C	9167	ORF1ab	9167T>C	p.Tyr2968His	View
G	T	21989	S	21989G>T	p.Val143Phe	View
C	A	26042	ORF3a	26042C>A	p.Thr217Asn	View
C	T	9611	ORF1ab	9611C>T	p.Leu3116Phe	View
TAAA	TAA	28094	ORF8	28094TAAA>TAA	p.Lys68fs	View
A	C	1353	ORF1ab	1353A>C	p.Asn363Thr	View
A	G	7797	ORF1ab	7797A>G	p.Lys2511Arg	View
T	C	21883	S	21883T>C	p.Gly107Gly	View
G	T	28703	N	28703G>T	p.Asp144Tyr	View
G	T	2600	ORF1ab	2600G>T	p.Val779Phe	View
C	T	7732	ORF1ab	7732C>T	p.Tyr2489Tyr	View
G	T	11222	ORF1ab	11222G>T	p.Val3653Phe	View
C	T	15017	ORF1ab	15017C>T	p.Ala4918Val	View
G	C	21793	S	21793G>C	p.Lys77Asn	View
G	A	495	ORF1ab	495G>A	p.Arg77Gln	View
G	T	19735	ORF1ab	19735G>T	p.Asp6491Tyr	View
G	T	28346	N	28346G>T	p.Gly25Cys	View
G	A	4136	ORF1ab	4136G>A	p.Val1291Ile	View
C	T	6445	ORF1ab	6445C>T	p.Asp2060Asp	View
C	T	11224	ORF1ab	11224C>T	p.Val3653Val	View
A	G	12004	ORF1ab	12004A>G	p.Ser3913Ser	View
C	A	12295	ORF1ab	12295C>A	p.Thr4010Thr	View
C	T	4155	ORF1ab	4155C>T	p.Thr1297Ile	View
C	T	13372	ORF1ab	13372C>T	p.Val4369Val	View
T	C	15393	ORF1ab	15393T>C	p.Arg5043Arg	View
G	T	21578	S	21578G>T	p.Val6Phe	View
T	G	21773	S	21773T>G	p.Ser71Ala	View
C	T	3426	ORF1ab	3426C>T	p.Pro1054Leu	View
C	T	7279	ORF1ab	7279C>T	p.Phe2338Phe	View
G	A	8171	ORF1ab	8171G>A	p.Ala2636Thr	View
C	T	10748	ORF1ab	10748C>T	p.Leu3495Phe	View
A	G	25448	ORF3a	25448A>G	p.Glu19Gly	View
G	A	26550	M	26550G>A	p.Val10Ile	View
A	G	28159	ORF8	28159A>G	p.Asn89Ser	View
G	A	2060	ORF1ab	2060G>A	p.Ala599Thr	View
G	A	8117	ORF1ab	8117G>A	p.Ala2618Thr	View
G	T	20931	ORF1ab	20931G>T	p.Thr6889Thr	View
C	T	23185	S	23185C>T	p.Phe541Phe	View
C	T	23644	S	23644C>T	p.Ala694Ala	View
T	C	25878	ORF3a	25878T>C	p.Ser162Ser	View
G	A	25879	ORF3a	25879G>A	p.Val163Ile	View
C	T	26078	ORF3a	26078C>T	p.Thr229Ile	View
A	G	8845	ORF1ab	8845A>G	p.Arg2860Arg	View
T	C	21579	S	21579T>C	p.Val6Ala	View
C	T	8480	ORF1ab	8480C>T	p.Pro2739Ser	View
C	T	10755	ORF1ab	10755C>T	p.Ala3497Val	View
T	C	29588	ORF10	29588T>C	p.Phe11Leu	View
C	T	2940	ORF1ab	2940C>T	p.Pro892Leu	View
G	A	6653	ORF1ab	6653G>A	p.Val2130Ile	View
A	G	15779	ORF1ab	15779A>G	p.Lys5172Arg	View
G	T	24173	S	24173G>T	p.Ala871Ser	View
G	A	29751	S	29751G>A		View
C	T	21005	ORF1ab	21005C>T	p.Ala6914Val	View
A	G	25998	ORF3a	25998A>G	p.Val202Val	View
C	T	4596	ORF1ab	4596C>T	p.Thr1444Ile	View
C	T	4999	ORF1ab	4999C>T	p.Asn1578Asn	View
C	T	6310	ORF1ab	6310C>T	p.Ser2015Ser	View
G	A	19180	ORF1ab	19180G>A	p.Val6306Ile	View
A	G	22525	S	22525A>G	p.Gln321Gln	View
G	T	25302	S	25302G>T	p.Cys1247Phe	View
G	A	2398	ORF1ab	2398G>A	p.Thr711Thr	View
C	T	5777	ORF1ab	5777C>T	p.His1838Tyr	View
C	T	8878	ORF1ab	8878C>T	p.Gly2871Gly	View
A	G	19515	ORF1ab	19515A>G	p.Arg6417Arg	View
G	A	19670	ORF1ab	19670G>A	p.Gly6469Glu	View
T	C	21797	S	21797T>C	p.Phe79Leu	View
G	T	22927	S	22927G>T	p.Leu455Phe	View
C	T	23638	S	23638C>T	p.Ile692Ile	View
C	A	25156	S	25156C>A	p.Ile1198Ile	View
G	A	25793	ORF3a	25793G>A	p.Arg134His	View
C	T	8994	ORF1ab	8994C>T	p.Thr2910Ile	View
C	T	12415	ORF1ab	12415C>T	p.Asn4050Asn	View
C	T	17795	ORF1ab	17795C>T	p.Ala5844Val	View
G	A	24857	S	24857G>A	p.Gly1099Ser	View
C	T	20233	ORF1ab	20233C>T	p.Pro6657Ser	View
C	T	16726	ORF1ab	16726C>T	p.His5488Tyr	View
G	T	25305	S	25305G>T	p.Cys1248Phe	View
C	T	26988	M	26988C>T	p.Leu156Leu	View
G	T	27430	ORF7a	27430G>T	p.Ala13Ser	View
T	A	23386	S	23386T>A	p.Val608Val	View
G	T	4561	ORF1ab	4561G>T	p.Ala1432Ala	View
C	T	12870	ORF1ab	12870C>T	p.Thr4202Ile	View
C	T	20480	ORF1ab	20480C>T	p.Ser6739Leu	View
T	C	28406	N	28406T>C	p.Leu45Leu	View
C	T	774	ORF1ab	774C>T	p.Thr170Ile	View
G	A	29737	S	29737G>A		View
G	T	18534	ORF1ab	18534G>T	p.Lys6090Asn	View
G	T	25691	ORF3a	25691G>T	p.Gly100Val	View
G	T	27505	ORF7a	27505G>T	p.Gly38*	View
T	C	2489	ORF1ab	2489T>C	p.Leu742Leu	View
G	A	2731	ORF1ab	2731G>A	p.Lys822Lys	View
C	T	7573	ORF1ab	7573C>T	p.Val2436Val	View
C	T	8982	ORF1ab	8982C>T	p.Thr2906Ile	View
C	T	24844	S	24844C>T	p.Val1094Val	View
C	T	8541	ORF1ab	8541C>T	p.Ala2759Val	View
T	C	18630	ORF1ab	18630T>C	p.Tyr6122Tyr	View
C	T	8266	ORF1ab	8266C>T	p.Gly2667Gly	View
T	C	18510	ORF1ab	18510T>C	p.Leu6082Leu	View
C	T	2610	ORF1ab	2610C>T	p.Pro782Leu	View
C	T	2836	ORF1ab	2836C>T	p.Cys857Cys	View
C	T	3264	ORF1ab	3264C>T	p.Thr1000Ile	View
A	G	13533	ORF1ab	13533A>G	p.Val4423Val	View
A	T	15775	ORF1ab	15775A>T	p.Ile5171Leu	View
C	T	21648	S	21648C>T	p.Thr29Ile	View
C	T	850	ORF1ab	850C>T	p.Gly195Gly	View
G	A	5504	ORF1ab	5504G>A	p.Val1747Ile	View
C	T	14877	ORF1ab	14877C>T	p.Tyr4871Tyr	View
G	T	16122	ORF1ab	16122G>T	p.Glu5286Asp	View
G	T	3896	ORF1ab	3896G>T	p.Val1211Phe	View
C	T	6701	ORF1ab	6701C>T	p.Leu2146Phe	View
C	T	12116	ORF1ab	12116C>T	p.Leu3951Phe	View
C	T	14352	ORF1ab	14352C>T	p.Asp4696Asp	View
G	T	17334	ORF1ab	17334G>T	p.Thr5690Thr	View
C	T	19881	ORF1ab	19881C>T	p.Asp6539Asp	View
G	T	17658	ORF1ab	17658G>T	p.Met5798Ile	View
G	T	19732	ORF1ab	19732G>T	p.Val6490Phe	View
G	A	22132	S	22132G>A	p.Arg190Arg	View
A	G	29663	ORF10	29663A>G	p.Asn36Asp	View
G	A	3434	ORF1ab	3434G>A	p.Val1057Ile	View
T	C	838	ORF1ab	838T>C	p.Cys191Cys	View
C	T	25658	ORF3a	25658C>T	p.Thr89Ile	View
C	T	147	ORF1ab	147C>T		View
C	T	3498	ORF1ab	3498C>T	p.Ala1078Val	View
A	G	14912	ORF1ab	14912A>G	p.Asn4883Ser	View
G	T	25183	S	25183G>T	p.Glu1207Asp	View
A	G	1072	ORF1ab	1072A>G	p.Glu269Glu	View
T	C	4165	ORF1ab	4165T>C	p.Val1300Val	View
T	C	7265	ORF1ab	7265T>C	p.Phe2334Leu	View
G	C	7675	ORF1ab	7675G>C	p.Ala2470Ala	View
A	G	15027	ORF1ab	15027A>G	p.Ala4921Ala	View
C	T	15879	ORF1ab	15879C>T	p.Cys5205Cys	View
T	C	16389	ORF1ab	16389T>C	p.Asn5375Asn	View
C	T	17586	ORF1ab	17586C>T	p.Asp5774Asp	View
G	T	29764	S	29764G>T		View
T	C	2055	ORF1ab	2055T>C	p.Val597Ala	View
T	C	8149	ORF1ab	8149T>C	p.Asn2628Asn	View
C	T	17569	ORF1ab	17569C>T	p.Pro5769Ser	View
T	A	18402	ORF1ab	18402T>A	p.Pro6046Pro	View
T	C	22090	S	22090T>C	p.Leu176Leu	View
T	C	23198	S	23198T>C	p.Leu546Leu	View
A	T	24727	S	24727A>T	p.Ser1055Ser	View
C	T	24771	S	24771C>T	p.Ala1070Val	View
C	T	28948	N	28948C>T	p.Asp225Asp	View
C	A	1387	ORF1ab	1387C>A	p.His374Gln	View
T	C	25674	ORF3a	25674T>C	p.Leu94Leu	View
A	G	2342	ORF1ab	2342A>G	p.Ile693Val	View
A	G	25065	S	25065A>G	p.Asp1168Gly	View
A	G	26069	ORF3a	26069A>G	p.Glu226Gly	View
G	A	12111	ORF1ab	12111G>A	p.Ser3949Asn	View
C	T	14318	ORF1ab	14318C>T	p.Thr4685Ile	View
G	T	15921	ORF1ab	15921G>T	p.Val5219Val	View
G	T	11365	ORF1ab	11365G>T	p.Val3700Val	View
G	T	2731	ORF1ab	2731G>T	p.Lys822Asn	View
T	C	24785	S	24785T>C	p.Phe1075Leu	View
G	A	25494	ORF3a	25494G>A	p.Thr34Thr	View
T	C	22750	S	22750T>C	p.Tyr396Tyr	View
T	C	3882	ORF1ab	3882T>C	p.Ile1206Thr	View
A	G	28359	N	28359A>G	p.Asn29Ser	View
C	T	11518	ORF1ab	11518C>T	p.Val3751Val	View
G	T	18651	ORF1ab	18651G>T	p.Glu6129Asp	View
T	C	21033	ORF1ab	21033T>C	p.Asp6923Asp	View
G	A	21600	S	21600G>A	p.Ser13Asn	View
T	C	21628	S	21628T>C	p.Thr22Thr	View
G	T	10384	ORF1ab	10384G>T	p.Gln3373His	View
C	T	4246	ORF1ab	4246C>T	p.Thr1327Thr	View
G	T	25767	ORF3a	25767G>T	p.Met125Ile	View
C	T	29719	S	29719C>T		View
C	T	5730	ORF1ab	5730C>T	p.Thr1822Ile	View
G	A	1439	ORF1ab	1439G>A	p.Gly392Ser	View
C	T	2102	ORF1ab	2102C>T	p.Leu613Leu	View
G	T	11540	ORF1ab	11540G>T	p.Val3759Phe	View
G	A	13714	ORF1ab	13714G>A	p.Asp4484Asn	View
A	G	22394	S	22394A>G	p.Lys278Glu	View
C	T	23290	S	23290C>T	p.Val576Val	View
G	T	27613	ORF7a	27613G>T	p.Val74Phe	View
T	C	11725	ORF1ab	11725T>C	p.Phe3820Phe	View
T	G	3049	ORF1ab	3049T>G	p.Asp928Glu	View
A	G	6604	ORF1ab	6604A>G	p.Leu2113Leu	View
T	C	6868	ORF1ab	6868T>C	p.Asn2201Asn	View
C	A	19983	ORF1ab	19983C>A	p.Val6573Val	View
T	C	27228	ORF6	27228T>C	p.Val9Val	View
T	C	29194	N	29194T>C	p.Phe307Phe	View
G	T	596	ORF1ab	596G>T	p.Val111Leu	View
C	T	12513	ORF1ab	12513C>T	p.Thr4083Met	View
C	T	1824	ORF1ab	1824C>T	p.Ala520Val	View
G	A	3620	ORF1ab	3620G>A	p.Gly1119Ser	View
C	T	13170	ORF1ab	13170C>T	p.Thr4302Ile	View
C	T	7488	ORF1ab	7488C>T	p.Thr2408Ile	View
A	G	8590	ORF1ab	8590A>G	p.Lys2775Lys	View
C	T	5806	ORF1ab	5806C>T	p.Cys1847Cys	View
C	T	12741	ORF1ab	12741C>T	p.Thr4159Ile	View
C	T	15277	ORF1ab	15277C>T	p.His5005Tyr	View
A	G	12884	ORF1ab	12884A>G	p.Thr4207Ala	View
T	C	25461	ORF3a	25461T>C	p.Ala23Ala	View
G	A	793	ORF1ab	793G>A	p.Glu176Glu	View
C	T	1884	ORF1ab	1884C>T	p.Ala540Val	View
G	T	13812	ORF1ab	13812G>T	p.Met4516Ile	View
T	G	19449	ORF1ab	19449T>G	p.Ser6395Ser	View
C	T	23833	S	23833C>T	p.Gly757Gly	View
C	T	25578	ORF3a	25578C>T	p.Ile62Ile	View
C	T	28915	N	28915C>T	p.Gly214Gly	View
C	T	8318	ORF1ab	8318C>T	p.Pro2685Ser	View
A	G	11991	ORF1ab	11991A>G	p.Glu3909Gly	View
G	A	14584	ORF1ab	14584G>A	p.Ala4774Thr	View
T	C	15114	ORF1ab	15114T>C	p.Ala4950Ala	View
C	T	15848	ORF1ab	15848C>T	p.Thr5195Ile	View
G	T	20940	ORF1ab	20940G>T	p.Leu6892Leu	View
C	G	22993	S	22993C>G	p.Ser477Arg	View
G	T	27955	ORF8	27955G>T	p.Ser21Ile	View
C	T	7164	ORF1ab	7164C>T	p.Thr2300Ile	View
G	A	885	ORF1ab	885G>A	p.Arg207His	View
G	T	5950	ORF1ab	5950G>T	p.Lys1895Asn	View
G	T	21786	S	21786G>T	p.Gly75Val	View
T	C	3265	ORF1ab	3265T>C	p.Thr1000Thr	View
C	T	5223	ORF1ab	5223C>T	p.Thr1653Ile	View
C	T	12853	ORF1ab	12853C>T	p.Phe4196Phe	View
A	C	1547	ORF1ab	1547A>C	p.Ser428Arg	View
A	G	23450	S	23450A>G	p.Thr630Ala	View
A	T	29644	ORF10	29644A>T	p.Gln29His	View
G	T	24053	S	24053G>T	p.Ala831Ser	View
G	A	3794	ORF1ab	3794G>A	p.Val1177Ile	View
T	C	8566	ORF1ab	8566T>C	p.Asn2767Asn	View
G	C	9332	ORF1ab	9332G>C	p.Ala3023Pro	View
T	C	16203	ORF1ab	16203T>C	p.Tyr5313Tyr	View
C	T	10650	ORF1ab	10650C>T	p.Thr3462Ile	View
C	A	27960	ORF8	27960C>A	p.Gln23Lys	View
T	C	7942	ORF1ab	7942T>C	p.Val2559Val	View
G	A	12872	ORF1ab	12872G>A	p.Gly4203Ser	View
A	T	16044	ORF1ab	16044A>T	p.Pro5260Pro	View
G	T	16528	ORF1ab	16528G>T	p.Val5422Phe	View
C	T	18166	ORF1ab	18166C>T	p.Pro5968Ser	View
T	C	27220	ORF6	27220T>C	p.Phe7Leu	View
C	T	28411	N	28411C>T	p.Pro46Pro	View
T	C	16170	ORF1ab	16170T>C	p.Asp5302Asp	View
G	A	16543	ORF1ab	16543G>A	p.Val5427Ile	View
C	T	21549	ORF1ab	21549C>T	p.Asn7095Asn	View
A	G	21979	S	21979A>G	p.Pro139Pro	View
C	T	28057	ORF8	28057C>T	p.Ala55Val	View
G	A	1899	ORF1ab	1899G>A	p.Arg545Gln	View
G	A	1184	ORF1ab	1184G>A	p.Ala307Thr	View
G	T	21334	ORF1ab	21334G>T	p.Ala7024Ser	View
G	A	29527	N	29527G>A	p.Gln418Gln	View
C	A	7488	ORF1ab	7488C>A	p.Thr2408Asn	View
C	T	12932	ORF1ab	12932C>T	p.Pro4223Ser	View
G	A	22936	S	22936G>A	p.Lys458Lys	View
A	G	4493	ORF1ab	4493A>G	p.Lys1410Glu	View
C	T	20629	ORF1ab	20629C>T	p.His6789Tyr	View
C	T	15963	ORF1ab	15963C>T	p.Gly5233Gly	View
G	T	25445	ORF3a	25445G>T	p.Gly18Val	View
A	G	1652	ORF1ab	1652A>G	p.Ile463Val	View
T	C	18447	ORF1ab	18447T>C	p.Val6061Val	View
C	T	1613	ORF1ab	1613C>T	p.Leu450Phe	View
T	C	20883	ORF1ab	20883T>C	p.Asp6873Asp	View
C	A	24083	S	24083C>A	p.Leu841Ile	View
T	C	28251	ORF8	28251T>C	p.Phe120Leu	View
T	A	28252	ORF8	28252T>A	p.Phe120Tyr	View
G	T	1265	ORF1ab	1265G>T	p.Gly334Cys	View
C	T	7390	ORF1ab	7390C>T	p.Ala2375Ala	View
C	T	14649	ORF1ab	14649C>T	p.Asn4795Asn	View
A	G	25545	ORF3a	25545A>G	p.Ala51Ala	View
C	T	27707	ORF7a	27707C>T	p.Ala105Val	View
G	A	12892	ORF1ab	12892G>A	p.Leu4209Leu	View
A	C	30	ORF1ab	30A>C		View
A	G	24367	S	24367A>G	p.Gln935Gln	View
G	T	24197	S	24197G>T	p.Ala879Ser	View
T	C	14837	ORF1ab	14837T>C	p.Ile4858Thr	View
C	A	21618	S	21618C>A	p.Thr19Lys	View
C	T	29762	S	29762C>T		View
C	T	1514	ORF1ab	1514C>T	p.His417Tyr	View
C	T	2898	ORF1ab	2898C>T	p.Ala878Val	View
C	T	6681	ORF1ab	6681C>T	p.Ala2139Val	View
G	T	12191	ORF1ab	12191G>T	p.Val3976Phe	View
G	T	25311	S	25311G>T	p.Cys1250Phe	View
G	T	7693	ORF1ab	7693G>T	p.Gln2476His	View
G	A	28423	N	28423G>A	p.Ala50Ala	View
T	C	29581	ORF10	29581T>C	p.Ala8Ala	View
C	T	27828	ORF7b	27828C>T	p.Leu25Phe	View
C	T	7989	ORF1ab	7989C>T	p.Ala2575Val	View
A	G	3008	ORF1ab	3008A>G	p.Lys915Glu	View
T	C	22573	S	22573T>C	p.Pro337Pro	View
G	A	23477	S	23477G>A	p.Gly639Ser	View
T	C	26543	M	26543T>C	p.Thr7Thr	View
C	A	11950	ORF1ab	11950C>A	p.His3895Gln	View
C	T	13225	ORF1ab	13225C>T	p.Ser4320Ser	View
C	G	23816	S	23816C>G	p.Leu752Val	View
C	T	1670	ORF1ab	1670C>T	p.Leu469Phe	View
C	T	13255	ORF1ab	13255C>T	p.Cys4330Cys	View
T	C	5137	ORF1ab	5137T>C	p.Asp1624Asp	View
A	G	6003	ORF1ab	6003A>G	p.Asp1913Gly	View
C	T	841	ORF1ab	841C>T	p.Gly192Gly	View
A	G	939	ORF1ab	939A>G	p.Lys225Arg	View
C	T	1593	ORF1ab	1593C>T	p.Ser443Phe	View
C	T	3045	ORF1ab	3045C>T	p.Pro927Leu	View
A	G	16522	ORF1ab	16522A>G	p.Thr5420Ala	View
T	G	20124	ORF1ab	20124T>G	p.Ile6620Met	View
C	T	364	ORF1ab	364C>T	p.Asp33Asp	View
G	T	2305	ORF1ab	2305G>T	p.Lys680Asn	View
C	T	6031	ORF1ab	6031C>T	p.Asn1922Asn	View
G	T	12202	ORF1ab	12202G>T	p.Lys3979Asn	View
G	T	24535	S	24535G>T	p.Val991Val	View
C	T	25416	ORF3a	25416C>T	p.Phe8Phe	View
C	T	26601	M	26601C>T	p.Leu27Leu	View
C	T	2445	ORF1ab	2445C>T	p.Thr727Ile	View
A	G	6391	ORF1ab	6391A>G	p.Glu2042Glu	View
A	G	10399	ORF1ab	10399A>G	p.Leu3378Leu	View
G	A	11266	ORF1ab	11266G>A	p.Leu3667Leu	View
A	G	14601	ORF1ab	14601A>G	p.Leu4779Leu	View
G	A	19969	ORF1ab	19969G>A	p.Ala6569Thr	View
C	T	22120	S	22120C>T	p.Phe186Phe	View
G	C	26803	M	26803G>C	p.Ser94Thr	View
A	G	29756	S	29756A>G		View
G	A	28917	N	28917G>A	p.Gly215Asp	View
G	A	2284	ORF1ab	2284G>A	p.Glu673Glu	View
T	C	27272	ORF6	27272T>C	p.Val24Ala	View
C	T	12099	ORF1ab	12099C>T	p.Ala3945Val	View
G	A	4285	ORF1ab	4285G>A	p.Glu1340Glu	View
A	T	22029	S	22029A>T	p.Glu156Val	View
G	T	9658	ORF1ab	9658G>T	p.Met3131Ile	View
T	C	1195	ORF1ab	1195T>C	p.Asn310Asn	View
T	C	4171	ORF1ab	4171T>C	p.Pro1302Pro	View
A	G	21096	ORF1ab	21096A>G	p.Lys6944Lys	View
A	G	27061	M	27061A>G	p.Lys180Arg	View
C	T	27654	ORF7a	27654C>T	p.Phe87Phe	View
C	T	20468	ORF1ab	20468C>T	p.Ala6735Val	View
A	C	20742	ORF1ab	20742A>C	p.Gln6826His	View
G	T	24781	S	24781G>T	p.Lys1073Asn	View
A	T	29521	N	29521A>T	p.Ser416Ser	View
C	T	18248	ORF1ab	18248C>T	p.Pro5995Leu	View
G	A	2204	ORF1ab	2204G>A	p.Glu647Lys	View
C	T	26270	E	26270C>T	p.Thr9Ile	View
C	T	2706	ORF1ab	2706C>T	p.Thr814Ile	View
C	T	9661	ORF1ab	9661C>T	p.Phe3132Phe	View
T	C	28216	ORF8	28216T>C	p.Phe108Ser	View
C	T	16610	ORF1ab	16610C>T	p.Thr5449Ile	View
C	G	25710	ORF3a	25710C>G	p.Leu106Leu	View
G	T	15100	ORF1ab	15100G>T	p.Ala4946Ser	View
A	G	15831	ORF1ab	15831A>G	p.Ala5189Ala	View
C	T	16178	ORF1ab	16178C>T	p.Ser5305Leu	View
A	G	20121	ORF1ab	20121A>G	p.Leu6619Leu	View
T	C	24499	S	24499T>C	p.Asp979Asp	View
G	A	28038	ORF8	28038G>A	p.Val49Ile	View
C	T	19113	ORF1ab	19113C>T	p.Asp6283Asp	View
G	T	28162	ORF8	28162G>T	p.Cys90Phe	View
G	T	29090	N	29090G>T	p.Ala273Ser	View
G	A	1268	ORF1ab	1268G>A	p.Asp335Asn	View
A	G	2006	ORF1ab	2006A>G	p.Ile581Val	View
C	T	20404	ORF1ab	20404C>T	p.Pro6714Ser	View
C	T	22413	S	22413C>T	p.Thr284Ile	View
A	G	3948	ORF1ab	3948A>G	p.Asp1228Gly	View
C	T	3393	ORF1ab	3393C>T	p.Ala1043Val	View
C	T	13009	ORF1ab	13009C>T	p.Ala4248Ala	View
G	T	13921	ORF1ab	13921G>T	p.Asp4553Tyr	View
G	T	18462	ORF1ab	18462G>T	p.Pro6066Pro	View
G	A	28321	N	28321G>A	p.Thr16Thr	View
A	G	12259	ORF1ab	12259A>G	p.Gln3998Gln	View
G	C	22205	S	22205G>C	p.Asp215His	View
C	T	28770	N	28770C>T	p.Thr166Ile	View
C	A	379	ORF1ab	379C>A	p.Val38Val	View
C	T	884	ORF1ab	884C>T	p.Arg207Cys	View
A	G	16421	ORF1ab	16421A>G	p.Gln5386Arg	View
C	T	28232	ORF8	28232C>T	p.Asp113Asp	View
C	T	5102	ORF1ab	5102C>T	p.His1613Tyr	View
G	T	7936	ORF1ab	7936G>T	p.Ala2557Ala	View
G	A	12385	ORF1ab	12385G>A	p.Leu4040Leu	View
C	T	19554	ORF1ab	19554C>T	p.Gly6430Gly	View
C	T	20030	ORF1ab	20030C>T	p.Ala6589Val	View
G	C	21624	S	21624G>C	p.Arg21Thr	View
G	T	23429	S	23429G>T	p.Ala623Ser	View
C	T	25378	S	25378C>T	p.Tyr1272Tyr	View
C	T	25669	ORF3a	25669C>T	p.His93Tyr	View
A	G	29700	S	29700A>G		View
C	T	527	ORF1ab	527C>T	p.Leu88Leu	View
T	C	1155	ORF1ab	1155T>C	p.Met297Thr	View
T	C	7026	ORF1ab	7026T>C	p.Met2254Thr	View
C	T	12439	ORF1ab	12439C>T	p.Pro4058Pro	View
G	A	16864	ORF1ab	16864G>A	p.Val5534Ile	View
G	T	23162	S	23162G>T	p.Val534Phe	View
A	G	25449	ORF3a	25449A>G	p.Glu19Glu	View
G	T	208	ORF1ab	208G>T		View
A	C	1956	ORF1ab	1956A>C	p.Lys564Thr	View
C	T	4421	ORF1ab	4421C>T	p.Arg1386Cys	View
C	A	8950	ORF1ab	8950C>A	p.Ile2895Ile	View
A	G	18298	ORF1ab	18298A>G	p.Ile6012Val	View
G	A	23522	S	23522G>A	p.Glu654Lys	View
A	C	25747	ORF3a	25747A>C	p.Asn119His	View
C	T	29836	S	29836C>T		View
G	T	13571	ORF1ab	13571G>T	p.Gly4436Val	View
T	C	5586	ORF1ab	5586T>C	p.Leu1774Pro	View
C	T	15613	ORF1ab	15613C>T	p.His5117Tyr	View
C	T	17373	ORF1ab	17373C>T	p.Ala5703Ala	View
G	A	21372	ORF1ab	21372G>A	p.Gln7036Gln	View
C	T	1170	ORF1ab	1170C>T	p.Ser302Phe	View
G	A	10877	ORF1ab	10877G>A	p.Gly3538Ser	View
A	T	2130	ORF1ab	2130A>T	p.Glu622Val	View
C	T	3170	ORF1ab	3170C>T	p.Leu969Phe	View
C	T	6336	ORF1ab	6336C>T	p.Ser2024Leu	View
C	T	12403	ORF1ab	12403C>T	p.Asn4046Asn	View
C	T	27673	ORF7a	27673C>T	p.Gln94*	View
C	T	20936	ORF1ab	20936C>T	p.Thr6891Met	View
G	T	25217	S	25217G>T	p.Gly1219Cys	View
T	C	25899	ORF3a	25899T>C	p.Ile169Ile	View
A	G	2641	ORF1ab	2641A>G	p.Glu792Glu	View
C	T	3622	ORF1ab	3622C>T	p.Gly1119Gly	View
G	T	4510	ORF1ab	4510G>T	p.Val1415Val	View
G	T	19481	ORF1ab	19481G>T	p.Gly6406Val	View
G	T	25654	ORF3a	25654G>T	p.Val88Leu	View
C	T	5622	ORF1ab	5622C>T	p.Pro1786Leu	View
G	T	14500	ORF1ab	14500G>T	p.Val4746Leu	View
T	C	15855	ORF1ab	15855T>C	p.Leu5197Leu	View
A	T	17060	ORF1ab	17060A>T	p.Gln5599Leu	View
G	T	25229	S	25229G>T	p.Gly1223Cys	View
T	C	27835	ORF7b	27835T>C	p.Ile27Thr	View
A	G	29752	S	29752A>G		View
A	T	12421	ORF1ab	12421A>T	p.Ala4052Ala	View
T	C	2992	ORF1ab	2992T>C	p.Asp909Asp	View
G	A	3892	ORF1ab	3892G>A	p.Glu1209Glu	View
C	A	12747	ORF1ab	12747C>A	p.Thr4161Asn	View
C	T	13140	ORF1ab	13140C>T	p.Thr4292Ile	View
A	G	17880	ORF1ab	17880A>G	p.Gln5872Gln	View
C	T	18928	ORF1ab	18928C>T	p.Pro6222Ser	View
G	T	2585	ORF1ab	2585G>T	p.Val774Phe	View
T	C	3788	ORF1ab	3788T>C	p.Leu1175Leu	View
T	C	23857	S	23857T>C	p.Arg765Arg	View
G	T	25459	ORF3a	25459G>T	p.Ala23Ser	View
G	T	27415	ORF7a	27415G>T	p.Ala8Ser	View
G	T	29260	N	29260G>T	p.Thr329Thr	View
A	G	2756	ORF1ab	2756A>G	p.Ile831Val	View
A	G	2869	ORF1ab	2869A>G	p.Val868Val	View
T	G	23113	S	23113T>G	p.Leu517Leu	View
A	T	6256	ORF1ab	6256A>T	p.Ala1997Ala	View
G	A	12345	ORF1ab	12345G>A	p.Ser4027Asn	View
A	G	21685	S	21685A>G	p.Lys41Lys	View
C	T	23520	S	23520C>T	p.Ala653Val	View
T	C	9006	ORF1ab	9006T>C	p.Val2914Ala	View
T	A	9008	ORF1ab	9008T>A	p.Leu2915Met	View
A	G	28702	N	28702A>G	p.Lys143Lys	View
C	T	17766	ORF1ab	17766C>T	p.Val5834Val	View
C	T	4423	ORF1ab	4423C>T	p.Arg1386Arg	View
A	G	20055	ORF1ab	20055A>G	p.Glu6597Glu	View
A	C	2590	ORF1ab	2590A>C	p.Glu775Asp	View
T	C	8671	ORF1ab	8671T>C	p.Phe2802Phe	View
G	T	1312	ORF1ab	1312G>T	p.Leu349Phe	View
A	G	22810	S	22810A>G	p.Gly416Gly	View
C	T	20405	ORF1ab	20405C>T	p.Pro6714Leu	View
C	T	24374	S	24374C>T	p.Leu938Phe	View
G	T	25793	ORF3a	25793G>T	p.Arg134Leu	View
C	T	5002	ORF1ab	5002C>T	p.Leu1579Leu	View
A	C	11353	ORF1ab	11353A>C	p.Thr3696Thr	View
G	T	18040	ORF1ab	18040G>T	p.Ala5926Ser	View
G	A	1589	ORF1ab	1589G>A	p.Gly442Ser	View
C	T	10993	ORF1ab	10993C>T	p.Ile3576Ile	View
G	T	12128	ORF1ab	12128G>T	p.Ala3955Ser	View
C	T	12153	ORF1ab	12153C>T	p.Ala3963Val	View
C	T	24382	S	24382C>T	p.Ser940Ser	View
C	A	8157	ORF1ab	8157C>A	p.Ser2631Tyr	View
T	C	8634	ORF1ab	8634T>C	p.Ile2790Thr	View
T	C	14796	ORF1ab	14796T>C	p.Asp4844Asp	View
C	T	2189	ORF1ab	2189C>T	p.Leu642Phe	View
G	A	4642	ORF1ab	4642G>A	p.Leu1459Leu	View
T	C	2128	ORF1ab	2128T>C	p.Tyr621Tyr	View
C	T	27684	ORF7a	27684C>T	p.Tyr97Tyr	View
G	T	21295	ORF1ab	21295G>T	p.Gly7011Cys	View
G	A	3323	ORF1ab	3323G>A	p.Val1020Ile	View
C	T	1404	ORF1ab	1404C>T	p.Pro380Leu	View
C	T	10078	ORF1ab	10078C>T	p.Phe3271Phe	View
G	T	22051	S	22051G>T	p.Ala163Ala	View
A	G	27797	ORF7b	27797A>G	p.Leu14Leu	View
C	T	2716	ORF1ab	2716C>T	p.Gly817Gly	View
C	T	7482	ORF1ab	7482C>T	p.Ser2406Leu	View
C	T	20099	ORF1ab	20099C>T	p.Ala6612Val	View
G	T	2458	ORF1ab	2458G>T	p.Met731Ile	View
G	T	8003	ORF1ab	8003G>T	p.Val2580Phe	View
G	A	10360	ORF1ab	10360G>A	p.Lys3365Lys	View
C	T	11511	ORF1ab	11511C>T	p.Thr3749Ile	View
T	A	10814	ORF1ab	10814T>A	p.Ser3517Thr	View
ACAT	A	29723	S	29723ACAT>A		View
T	A	29728	S	29728T>A		View
A	G	20355	ORF1ab	20355A>G	p.Leu6697Leu	View
G	A	680	ORF1ab	680G>A	p.Asp139Asn	View
C	T	6033	ORF1ab	6033C>T	p.Ala1923Val	View
C	T	6695	ORF1ab	6695C>T	p.Pro2144Ser	View
C	T	29580	ORF10	29580C>T	p.Ala8Val	View
G	A	7560	ORF1ab	7560G>A	p.Arg2432Lys	View
C	A	15480	ORF1ab	15480C>A	p.Thr5072Thr	View
G	T	19947	ORF1ab	19947G>T	p.Lys6561Asn	View
G	A	20397	ORF1ab	20397G>A	p.Lys6711Lys	View
C	T	17012	ORF1ab	17012C>T	p.Ser5583Leu	View
G	T	24095	S	24095G>T	p.Ala845Ser	View
C	T	9438	ORF1ab	9438C>T	p.Thr3058Ile	View
C	G	22982	S	22982C>G	p.Gln474Glu	View
A	G	6625	ORF1ab	6625A>G	p.Lys2120Lys	View
A	G	10657	ORF1ab	10657A>G	p.Thr3464Thr	View
T	C	22078	S	22078T>C	p.Ser172Ser	View
C	T	24442	S	24442C>T	p.Asn960Asn	View
A	G	2031	ORF1ab	2031A>G	p.Asp589Gly	View
C	T	4334	ORF1ab	4334C>T	p.Pro1357Ser	View
T	C	27324	ORF6	27324T>C	p.Ser41Ser	View
G	A	27750	ORF7a	27750G>A	p.Lys119Lys	View
T	C	6238	ORF1ab	6238T>C	p.Val1991Val	View
G	T	23873	S	23873G>T	p.Ala771Ser	View
G	T	28580	N	28580G>T	p.Asp103Tyr	View
G	T	4144	ORF1ab	4144G>T	p.Glu1293Asp	View
G	A	5924	ORF1ab	5924G>A	p.Val1887Ile	View
G	A	13921	ORF1ab	13921G>A	p.Asp4553Asn	View
C	T	21182	ORF1ab	21182C>T	p.Ser6973Phe	View
T	G	21775	S	21775T>G	p.Ser71Ser	View
C	T	22855	S	22855C>T	p.Gly431Gly	View
G	T	27877	ORF7b	27877G>T	p.Cys41Phe	View
C	T	5457	ORF1ab	5457C>T	p.Thr1731Ile	View
G	T	11230	ORF1ab	11230G>T	p.Met3655Ile	View
T	C	19349	ORF1ab	19349T>C	p.Val6362Ala	View
G	A	28878	N	28878G>A	p.Ser202Asn	View
T	C	13417	ORF1ab	13417T>C	p.Asp4384Asp	View
C	T	1284	ORF1ab	1284C>T	p.Thr340Ile	View
T	C	7120	ORF1ab	7120T>C	p.Ser2285Ser	View
C	T	10456	ORF1ab	10456C>T	p.Phe3397Phe	View
C	T	22689	S	22689C>T	p.Thr376Ile	View
C	T	5672	ORF1ab	5672C>T	p.Pro1803Ser	View
G	A	8881	ORF1ab	8881G>A	p.Thr2872Thr	View
T	C	2158	ORF1ab	2158T>C	p.Leu631Leu	View
C	T	3244	ORF1ab	3244C>T	p.Gly993Gly	View
C	T	19018	ORF1ab	19018C>T	p.Pro6252Ser	View
G	A	20173	ORF1ab	20173G>A	p.Val6637Ile	View
T	C	23010	S	23010T>C	p.Val483Ala	View
G	T	26020	ORF3a	26020G>T	p.Asp210Tyr	View
C	T	1919	ORF1ab	1919C>T	p.Leu552Phe	View
C	T	2925	ORF1ab	2925C>T	p.Ser887Phe	View
G	T	26056	ORF3a	26056G>T	p.Asp222Tyr	View
C	T	7811	ORF1ab	7811C>T	p.His2516Tyr	View
T	C	8554	ORF1ab	8554T>C	p.Gly1945Gly	View
A	T	10693	ORF1ab	10693A>T	p.Ile3476Ile	View
C	T	18568	ORF1ab	18568C>T	p.Leu6102Phe	View
T	A	21940	S	21940T>A	p.Val126Val	View
A	T	23913	S	23913A>T	p.Gln784Leu	View
G	T	25621	ORF3a	25621G>T	p.Val77Phe	View
C	A	26533	M	26533C>A	p.Ser4Tyr	View
T	A	26876	M	26876T>A	p.Ile118Ile	View
C	T	28905	N	28905C>T	p.Ala211Val	View
G	A	6894	ORF1ab	6894G>A	p.Cys2210Tyr	View
C	T	2668	ORF1ab	2668C>T	p.Ala801Ala	View
C	T	12141	ORF1ab	12141C>T	p.Thr3959Ile	View
C	A	28292	N	28292C>A	p.Gln7Lys	View
A	G	4336	ORF1ab	4336A>G	p.Pro1357Pro	View
C	T	8293	ORF1ab	8293C>T	p.Thr2676Thr	View
T	C	18488	ORF1ab	18488T>C	p.Ile6075Thr	View
T	C	24739	S	24739T>C	p.Gly1059Gly	View
T	C	25695	ORF3a	25695T>C	p.Leu101Leu	View
A	G	26530	M	26530A>G	p.Asp3Gly	View
G	T	3606	ORF1ab	3606G>T	p.Cys1114Phe	View
C	T	8595	ORF1ab	8595C>T	p.Thr2777Ile	View
A	T	28338	N	28338A>T	p.Asp22Val	View
G	T	29032	N	29032G>T	p.Glu253Asp	View
G	T	4211	ORF1ab	4211G>T	p.Ala1316Ser	View
A	G	10478	ORF1ab	10478A>G	p.Asn3405Asp	View
C	T	24621	S	24621C>T	p.Ala1020Val	View
G	T	1598	ORF1ab	1598G>T	p.Gly445Cys	View
C	T	6070	ORF1ab	6070C>T	p.Ile1935Ile	View
C	A	13515	ORF1ab	13515C>A	p.Gly4417Gly	View
G	T	22216	S	22216G>T	p.Gln218His	View
A	G	1953	ORF1ab	1953A>G	p.Gln563Arg	View
T	C	7825	ORF1ab	7825T>C	p.His2520His	View
A	G	11319	ORF1ab	11319A>G	p.Tyr3685Cys	View
G	A	1361	ORF1ab	1361G>A	p.Val366Ile	View
T	C	21616	S	21616T>C	p.Leu18Leu	View
C	A	29046	N	29046C>A	p.Pro258His	View
C	A	29546	ORF10	29546C>A		View
T	C	1237	ORF1ab	1237T>C	p.Asp324Asp	View
C	T	14178	ORF1ab	14178C>T	p.Thr4638Thr	View
A	T	23572	S	23572A>T	p.Ile670Ile	View
G	A	19666	ORF1ab	19666G>A	p.Asp6468Asn	View
C	T	6593	ORF1ab	6593C>T	p.Pro2110Ser	View
G	A	8349	ORF1ab	8349G>A	p.Ser2695Asn	View
A	G	8755	ORF1ab	8755A>G	p.Lys2830Lys	View
C	T	22730	S	22730C>T	p.Leu390Phe	View
T	C	19354	ORF1ab	19354T>C	p.Leu6364Leu	View
T	C	24127	S	24127T>C	p.Phe855Phe	View
A	G	27997	ORF8	27997A>G	p.Asp35Gly	View
G	A	24293	S	24293G>A	p.Val911Ile	View
G	A	7058	ORF1ab	7058G>A	p.Gly2265Ser	View
A	T	28911	N	28911A>T	p.Asn213Ile	View
A	G	2483	ORF1ab	2483A>G	p.Ile740Val	View
C	T	6011	ORF1ab	6011C>T	p.Pro1916Ser	View
T	C	6595	ORF1ab	6595T>C	p.Pro2110Pro	View
C	A	27532	ORF7a	27532C>A	p.His47Asn	View
C	T	11564	ORF1ab	11564C>T	p.Pro3767Ser	View
C	T	15928	ORF1ab	15928C>T	p.Pro5222Ser	View
C	T	17518	ORF1ab	17518C>T	p.Leu5752Phe	View
T	A	25711	ORF3a	25711T>A	p.Tyr107Asn	View
A	G	2176	ORF1ab	2176A>G	p.Glu637Glu	View
A	G	3278	ORF1ab	3278A>G	p.Ile1005Val	View
T	C	13527	ORF1ab	13527T>C	p.Asp4421Asp	View
A	G	1154	ORF1ab	1154A>G	p.Met297Val	View
A	G	1558	ORF1ab	1558A>G	p.Ile431Met	View
T	C	5619	ORF1ab	5619T>C	p.Ile1785Thr	View
C	A	19955	ORF1ab	19955C>A	p.Thr6564Asn	View
C	T	24826	S	24826C>T	p.His1088His	View
G	T	25429	ORF3a	25429G>T	p.Val13Leu	View
G	C	28209	ORF8	28209G>C	p.Glu106Gln	View
G	T	29759	S	29759G>T		View
A	G	1230	ORF1ab	1230A>G	p.Lys322Arg	View
G	T	1957	ORF1ab	1957G>T	p.Lys564Asn	View
C	T	12008	ORF1ab	12008C>T	p.Leu3915Phe	View
T	C	23689	S	23689T>C	p.Asn709Asn	View
T	C	27504	ORF7a	27504T>C	p.Ser37Ser	View
T	C	28098	ORF8	28098T>C	p.Ser69Pro	View
T	C	29029	N	29029T>C	p.Ala252Ala	View
C	T	29230	N	29230C>T	p.Arg319Arg	View
C	A	1800	ORF1ab	1800C>A	p.Thr512Lys	View
T	C	3769	ORF1ab	3769T>C	p.Thr1168Thr	View
A	G	8636	ORF1ab	8636A>G	p.Thr2791Ala	View
T	C	21610	S	21610T>C	p.Val16Val	View
C	T	28758	N	28758C>T	p.Pro162Leu	View
A	G	6616	ORF1ab	6616A>G	p.Leu2117Leu	View
C	T	15830	ORF1ab	15830C>T	p.Ala5189Val	View
T	C	17241	ORF1ab	17241T>C	p.Pro5659Pro	View
C	T	3099	ORF1ab	3099C>T	p.Thr945Ile	View
G	T	4960	ORF1ab	4960G>T	p.Val1565Val	View
C	T	7564	ORF1ab	7564C>T	p.Ser2433Ser	View
C	A	10301	ORF1ab	10301C>A	p.Gln3346Lys	View
G	T	10688	ORF1ab	10688G>T	p.Val3475Phe	View
C	A	14230	ORF1ab	14230C>A	p.Pro4656Thr	View
G	T	21800	S	21800G>T	p.Asp80Tyr	View
C	T	25678	ORF3a	25678C>T	p.Leu96Phe	View
G	A	3431	ORF1ab	3431G>A	p.Val1056Met	View
G	A	6413	ORF1ab	6413G>A	p.Glu2050Lys	View
G	T	20518	ORF1ab	20518G>T	p.Asp6752Tyr	View
G	T	23628	S	23628G>T	p.Ser689Ile	View
A	T	27674	ORF7a	27674A>T	p.Gln94Leu	View
G	T	28812	N	28812G>T	p.Ser180Ile	View
C	T	9226	ORF1ab	9226C>T	p.Gly2987Gly	View
A	C	9484	ORF1ab	9484A>C	p.Glu3073Asp	View
A	G	10552	ORF1ab	10552A>G	p.Glu3429Glu	View
A	T	23148	S	23148A>T	p.Lys529Met	View
C	T	8752	ORF1ab	8752C>T	p.Asn2829Asn	View
C	T	304	ORF1ab	304C>T	p.His13His	View
A	G	1096	ORF1ab	1096A>G	p.Leu277Leu	View
T	A	1330	ORF1ab	1330T>A	p.Thr355Thr	View
C	A	2113	ORF1ab	2113C>A	p.Ile616Ile	View
C	T	2939	ORF1ab	2939C>T	p.Pro892Ser	View
A	G	5026	ORF1ab	5026A>G	p.Ser1587Ser	View
G	T	15689	ORF1ab	15689G>T	p.Arg5142Leu	View
C	T	1911	ORF1ab	1911C>T	p.Ser549Phe	View
T	C	6614	ORF1ab	6614T>C	p.Leu2117Leu	View
C	T	13592	ORF1ab	13592C>T	p.Thr4443Ile	View
C	T	20104	ORF1ab	20104C>T	p.Leu6614Phe	View
C	T	20380	ORF1ab	20380C>T	p.Leu6706Leu	View
C	T	1377	ORF1ab	1377C>T	p.Pro371Leu	View
A	G	2969	ORF1ab	2969A>G	p.Met902Val	View
G	T	11272	ORF1ab	11272G>T	p.Met3669Ile	View
A	G	14116	ORF1ab	14116A>G	p.Thr4618Ala	View
T	G	5468	ORF1ab	5468T>G	p.Leu1735Val	View
T	C	25837	ORF3a	25837T>C	p.Trp149Arg	View
G	C	27147	M	27147G>C	p.Asp209His	View
C	T	11674	ORF1ab	11674C>T	p.Tyr3803Tyr	View
G	A	701	ORF1ab	701G>A	p.Gly146Ser	View
G	A	27214	ORF6	27214G>A	p.Val5Ile	View
A	T	28792	N	28792A>T	p.Ala173Ala	View
G	A	9314	ORF1ab	9314G>A	p.Val3017Ile	View
A	G	13198	ORF1ab	13198A>G	p.Thr4311Thr	View
G	T	2659	ORF1ab	2659G>T	p.Lys798Asn	View
C	T	4672	ORF1ab	4672C>T	p.Leu1469Leu	View
C	T	8605	ORF1ab	8605C>T	p.Phe2780Phe	View
A	G	10028	ORF1ab	10028A>G	p.Thr3255Ala	View
G	T	19549	ORF1ab	19549G>T	p.Ala6429Ser	View
C	A	25349	S	25349C>A	p.Pro1263Thr	View
A	G	22546	S	22546A>G	p.Arg328Arg	View
T	C	24979	S	24979T>C	p.Asp1139Asp	View
T	C	505	ORF1ab	505T>C	p.Pro80Pro	View
G	T	872	ORF1ab	872G>T	p.Asp203Tyr	View
T	C	4303	ORF1ab	4303T>C	p.Leu1346Leu	View
T	C	7783	ORF1ab	7783T>C	p.Asp2506Asp	View
A	T	15984	ORF1ab	15984A>T	p.Val5240Val	View
A	G	20251	ORF1ab	20251A>G	p.Ile6663Val	View
C	T	22075	S	22075C>T	p.Val171Val	View
G	T	28221	ORF8	28221G>T	p.Glu110*	View
T	C	20969	ORF1ab	20969T>C	p.Val6902Ala	View
T	C	20754	ORF1ab	20754T>C	p.Asp6830Asp	View
C	T	28674	N	28674C>T	p.Ala134Val	View
C	T	16694	ORF1ab	16694C>T	p.Thr5477Ile	View
A	G	13456	ORF1ab	13456A>G	p.Gln4397Gln	View
A	C	3840	ORF1ab	3840A>C	p.Glu1192Ala	View
T	C	28240	ORF8	28240T>C	p.Val116Ala	View
T	G	3694	ORF1ab	3694T>G	p.Val1143Val	View
G	T	16813	ORF1ab	16813G>T	p.Val5517Leu	View
C	T	5646	ORF1ab	5646C>T	p.Thr1794Ile	View
C	T	10030	ORF1ab	10030C>T	p.Thr3255Thr	View
A	G	11386	ORF1ab	11386A>G	p.Arg3707Arg	View
T	C	15939	ORF1ab	15939T>C	p.Asp5225Asp	View
T	C	20407	ORF1ab	20407T>C	p.Phe6715Leu	View
C	T	676	ORF1ab	676C>T	p.Gly137Gly	View
T	C	9172	ORF1ab	9172T>C	p.Leu2969Leu	View
A	G	10948	ORF1ab	10948A>G	p.Arg3561Arg	View
C	T	10977	ORF1ab	10977C>T	p.Ala3571Val	View
A	G	24874	S	24874A>G	p.Val1104Val	View
C	T	2455	ORF1ab	2455C>T	p.Leu730Leu	View
C	T	14625	ORF1ab	14625C>T	p.Cys4787Cys	View
C	T	14937	ORF1ab	14937C>T	p.Asp4891Asp	View
G	T	15260	ORF1ab	15260G>T	p.Ser4999Ile	View
A	T	24432	S	24432A>T	p.Gln957Leu	View
G	A	25909	ORF3a	25909G>A	p.Asp173Asn	View
C	T	26833	M	26833C>T	p.Ala104Val	View
A	G	28081	ORF8	28081A>G	p.Asp63Gly	View
C	T	16596	ORF1ab	16596C>T	p.Tyr5444Tyr	View
G	T	15664	ORF1ab	15664G>T	p.Val5134Leu	View
A	G	13734	ORF1ab	13734A>G	p.Lys4490Lys	View
C	T	23595	S	23595C>T	p.Thr678Ile	View
G	A	24305	S	24305G>A	p.Val915Ile	View
T	C	26677	M	26677T>C	p.Ile52Thr	View
C	T	27942	ORF8	27942C>T	p.His17Tyr	View
C	T	17000	ORF1ab	17000C>T	p.Thr5579Ile	View
C	A	25714	ORF3a	25714C>A	p.Leu108Ile	View
G	T	4444	ORF1ab	4444G>T	p.Val1393Val	View
C	A	19186	ORF1ab	19186C>A	p.Leu6308Ile	View
C	T	20611	ORF1ab	20611C>T	p.Leu6783Phe	View
T	C	23227	S	23227T>C	p.Ser555Ser	View
G	T	5555	ORF1ab	5555G>T	p.Gly1764Cys	View
T	C	15015	ORF1ab	15015T>C	p.Asp4917Asp	View
G	A	17562	ORF1ab	17562G>A	p.Arg5766Arg	View
T	C	20109	ORF1ab	20109T>C	p.Asn6615Asn	View
A	G	25495	ORF3a	25495A>G	p.Ile35Val	View
G	T	26428	E	26428G>T	p.Val62Phe	View
C	T	6843	ORF1ab	6843C>T	p.Ser2193Phe	View
T	C	12592	ORF1ab	12592T>C	p.Val4109Val	View
T	C	22828	S	22828T>C	p.Asn422Asn	View
G	T	26199	ORF3a	26199G>T	p.Thr269Thr	View
A	G	253	ORF1ab	253A>G		View
C	T	9943	ORF1ab	9943C>T	p.Tyr3226Tyr	View
A	G	16076	ORF1ab	16076A>G	p.Asp5271Gly	View
C	T	20628	ORF1ab	20628C>T	p.Gly6788Gly	View
G	T	25012	S	25012G>T	p.Glu1150Asp	View
C	T	25854	ORF3a	25854C>T	p.Tyr154Tyr	View
C	T	29548	ORF10	29548C>T		View
G	T	6421	ORF1ab	6421G>T	p.Val2052Val	View
G	T	6536	ORF1ab	6536G>T	p.Gly2091Cys	View
C	T	16616	ORF1ab	16616C>T	p.Thr5451Ile	View
C	T	27603	ORF7a	27603C>T	p.Gly70Gly	View
C	T	12076	ORF1ab	12076C>T	p.Asn3937Asn	View
G	A	5880	ORF1ab	5880G>A	p.Ser1872Asn	View
A	G	25596	ORF3a	25596A>G	p.Arg68Arg	View
C	T	26195	ORF3a	26195C>T	p.Thr268Met	View
A	G	14774	ORF1ab	14774A>G	p.Asp4837Gly	View
C	T	22675	S	22675C>T	p.Ser371Ser	View
G	T	28325	N	28325G>T	p.Gly18Cys	View
G	T	28326	N	28326G>T	p.Gly18Val	View
G	T	11552	ORF1ab	11552G>T	p.Val3763Phe	View
C	T	21789	S	21789C>T	p.Thr76Ile	View
T	C	249	ORF1ab	249T>C		View
A	G	7986	ORF1ab	7986A>G	p.Gln2574Arg	View
A	G	1588	ORF1ab	1588A>G	p.Glu441Glu	View
C	T	29675	S	29675C>T		View
C	T	10615	ORF1ab	10615C>T	p.Asp3450Asp	View
G	A	24277	S	24277G>A	p.Arg905Arg	View
T	C	10591	ORF1ab	10591T>C	p.Gly3442Gly	View
C	T	23320	S	23320C>T	p.Asp586Asp	View
A	G	24598	S	24598A>G	p.Leu1012Leu	View
A	G	13707	ORF1ab	13707A>G	p.Leu4481Leu	View
A	T	27209	ORF6	27209A>T	p.His3Leu	View
C	T	21110	ORF1ab	21110C>T	p.Thr6949Ile	View
C	T	3809	ORF1ab	3809C>T	p.Leu1182Phe	View
C	T	5691	ORF1ab	5691C>T	p.Ala1809Val	View
G	A	16377	ORF1ab	16377G>A	p.Pro5371Pro	View
T	C	23031	S	23031T>C	p.Phe490Ser	View
C	T	26776	M	26776C>T	p.Ala85Val	View
C	T	11074	ORF1ab	11074C>T	p.Phe3603Phe	View
A	G	1752	ORF1ab	1752A>G	p.Tyr496Cys	View
C	T	28227	ORF8	28227C>T	p.His112Tyr	View
A	G	4220	ORF1ab	4220A>G	p.Lys1319Glu	View
C	T	6883	ORF1ab	6883C>T	p.Val2206Val	View
T	C	14361	ORF1ab	14361T>C	p.Ile4699Ile	View
A	G	309	ORF1ab	309A>G	p.Gln15Arg	View
G	A	940	ORF1ab	940G>A	p.Lys225Lys	View
A	G	3327	ORF1ab	3327A>G	p.Gln1021Arg	View
C	A	13199	ORF1ab	13199C>A	p.Pro4312Thr	View
T	C	28756	N	28756T>C	p.Leu161Leu	View
G	T	2648	ORF1ab	2648G>T	p.Asp795Tyr	View
C	T	22550	S	22550C>T	p.Pro330Ser	View
G	T	24751	S	24751G>T	p.Leu1063Phe	View
A	T	12526	ORF1ab	12526A>T	p.Thr4087Thr	View
G	A	14209	ORF1ab	14209G>A	p.Val4649Ile	View
T	G	15060	ORF1ab	15060T>G	p.Thr4932Thr	View
T	C	17091	ORF1ab	17091T>C	p.Gly5609Gly	View
A	G	24287	S	24287A>G	p.Ile909Val	View
C	T	1347	ORF1ab	1347C>T	p.Pro361Leu	View
C	T	1943	ORF1ab	1943C>T	p.Arg560Cys	View
G	T	2534	ORF1ab	2534G>T	p.Val757Phe	View
C	A	5700	ORF1ab	5700C>A	p.Ala1812Asp	View
G	T	17944	ORF1ab	17944G>T	p.Val5894Leu	View
T	C	1483	ORF1ab	1483T>C	p.Phe406Phe	View
G	A	2357	ORF1ab	2357G>A	p.Ala698Thr	View
C	T	2523	ORF1ab	2523C>T	p.Thr753Ile	View
T	C	2734	ORF1ab	2734T>C	p.Val823Val	View
G	A	3998	ORF1ab	3998G>A	p.Glu1245Lys	View
A	G	17621	ORF1ab	17621A>G	p.Lys5786Arg	View
C	T	25731	ORF3a	25731C>T	p.Tyr113Tyr	View
G	A	124	ORF1ab	124G>A		View
G	A	22094	S	22094G>A	p.Asp178Asn	View
C	T	4320	ORF1ab	4320C>T	p.Ala1352Val	View
T	C	10468	ORF1ab	10468T>C	p.Gly3401Gly	View
T	G	22672	S	22672T>G	p.Asn370Lys	View
G	T	896	ORF1ab	896G>T	p.Ala211Ser	View
C	T	3885	ORF1ab	3885C>T	p.Pro1207Leu	View
G	T	13618	ORF1ab	13618G>T	p.Asp4452Tyr	View
A	G	20503	ORF1ab	20503A>G	p.Ile6747Val	View
C	T	9195	ORF1ab	9195C>T	p.Thr2977Ile	View
T	C	9485	ORF1ab	9485T>C	p.Tyr3074His	View
G	A	15253	ORF1ab	15253G>A	p.Val4997Ile	View
C	G	17644	ORF1ab	17644C>G	p.Gln5794Glu	View
A	G	20163	ORF1ab	20163A>G	p.Lys6633Lys	View
C	G	26305	E	26305C>G	p.Leu21Val	View
G	C	29405	N	29405G>C	p.Glu378Gln	View
C	T	123	ORF1ab	123C>T		View
T	C	13932	ORF1ab	13932T>C	p.Asp4556Asp	View
C	T	245	ORF1ab	245C>T		View
T	C	11701	ORF1ab	11701T>C	p.Asp3812Asp	View
G	T	15544	ORF1ab	15544G>T	p.Ala5094Ser	View
C	T	19118	ORF1ab	19118C>T	p.Ala6285Val	View
A	G	22924	S	22924A>G	p.Arg454Arg	View
T	A	24172	S	24172T>A	p.Ile870Ile	View
C	T	27981	ORF8	27981C>T	p.Pro30Ser	View
G	A	2282	ORF1ab	2282G>A	p.Glu673Lys	View
T	C	9742	ORF1ab	9742T>C	p.Asn3159Asn	View
C	T	17639	ORF1ab	17639C>T	p.Ser5792Leu	View
C	T	19718	ORF1ab	19718C>T	p.Thr6485Ile	View
T	G	16425	ORF1ab	16425T>G	p.Leu5387Leu	View
C	T	26455	E	26455C>T	p.Pro71Ser	View
T	G	2330	ORF1ab	2330T>G	p.Cys689Gly	View
C	T	9120	ORF1ab	9120C>T	p.Thr2952Ile	View
A	C	12197	ORF1ab	12197A>C	p.Lys3978Gln	View
C	T	1218	ORF1ab	1218C>T	p.Ser318Leu	View
G	T	28109	ORF8	28109G>T	p.Gln72His	View
C	T	340	ORF1ab	340C>T	p.Asp25Asp	View
T	C	2533	ORF1ab	2533T>C	p.Val756Val	View
G	T	20718	ORF1ab	20718G>T	p.Met6818Ile	View
C	T	2299	ORF1ab	2299C>T	p.Phe678Phe	View
G	T	25489	ORF3a	25489G>T	p.Ala33Ser	View
G	C	932	ORF1ab	932G>C	p.Asp223His	View
G	T	2755	ORF1ab	2755G>T	p.Val830Val	View
C	T	2880	ORF1ab	2880C>T	p.Ala872Val	View
A	C	3181	ORF1ab	3181A>C	p.Glu972Asp	View
C	T	8639	ORF1ab	8639C>T	p.Pro2792Ser	View
C	T	10798	ORF1ab	10798C>T	p.Asp3511Asp	View
C	T	16762	ORF1ab	16762C>T	p.Leu5500Phe	View
T	C	24982	S	24982T>C	p.Pro1140Pro	View
T	C	28128	ORF8	28128T>C	p.Tyr79His	View
C	T	13945	ORF1ab	13945C>T	p.Pro4561Ser	View
T	C	21571	S	21571T>C	p.Val3Val	View
T	C	24100	S	24100T>C	p.Ala846Ala	View
C	T	29721	S	29721C>T		View
A	G	15706	ORF1ab	15706A>G	p.Met5148Val	View
C	T	17403	ORF1ab	17403C>T	p.Ala5713Ala	View
C	T	13366	ORF1ab	13366C>T	p.Asn4367Asn	View
G	A	6537	ORF1ab	6537G>A	p.Gly2091Asp	View
C	T	27679	ORF7a	27679C>T	p.Leu96Phe	View
G	T	4207	ORF1ab	4207G>T	p.Ala1314Ala	View
T	C	25745	ORF3a	25745T>C	p.Ile118Thr	View
A	G	25746	ORF3a	25746A>G	p.Ile118Met	View
G	T	3250	ORF1ab	3250G>T	p.Glu995Asp	View
A	C	26759	M	26759A>C	p.Gly79Gly	View
C	A	344	ORF1ab	344C>A	p.Leu27Ile	View
T	C	1456	ORF1ab	1456T>C	p.Leu397Leu	View
C	T	2676	ORF1ab	2676C>T	p.Pro804Leu	View
C	T	8836	ORF1ab	8836C>T	p.Val2857Val	View
C	T	19290	ORF1ab	19290C>T	p.Gly6342Gly	View
C	T	22792	S	22792C>T	p.Ile410Ile	View
T	A	22917	S	22917T>A	p.Leu452Gln	View
T	G	26047	ORF3a	26047T>G	p.Leu219Val	View
G	C	28134	ORF8	28134G>C	p.Val81Leu	View
C	T	28744	N	28744C>T	p.Ile157Ile	View
C	T	7321	ORF1ab	7321C>T	p.Ser2352Ser	View
A	G	5689	ORF1ab	5689A>G	p.Ser1808Ser	View
C	T	11036	ORF1ab	11036C>T	p.Leu3591Phe	View
T	A	4517	ORF1ab	4517T>A	p.Tyr1418Asn	View
A	T	1423	ORF1ab	1423A>T	p.Glu386Asp	View
G	A	14181	ORF1ab	14181G>A	p.Leu4639Leu	View
A	G	18956	ORF1ab	18956A>G	p.Asn6231Ser	View
C	T	18491	ORF1ab	18491C>T	p.Pro6076Leu	View
A	G	19899	ORF1ab	19899A>G	p.Pro6545Pro	View
C	T	29803	S	29803C>T		View
C	T	2137	ORF1ab	2137C>T	p.Leu624Leu	View
T	C	2432	ORF1ab	2432T>C	p.Ser723Pro	View
C	A	3961	ORF1ab	3961C>A	p.Ile1232Ile	View
C	T	25693	ORF3a	25693C>T	p.Leu101Phe	View
A	T	29430	N	29430A>T	p.Gln386Leu	View
G	A	596	ORF1ab	596G>A	p.Val111Met	View
G	A	17847	ORF1ab	17847G>A	p.Gln5861Gln	View
A	C	17039	ORF1ab	17039A>C	p.Asn5592Thr	View
T	C	20358	ORF1ab	20358T>C	p.Gly6698Gly	View
G	C	29260	N	29260G>C	p.Thr329Thr	View
C	T	4980	ORF1ab	4980C>T	p.Thr1572Ile	View
G	A	17478	ORF1ab	17478G>A	p.Lys5738Lys	View
A	G	25102	S	25102A>G	p.Gln1180Gln	View
C	T	28099	ORF8	28099C>T	p.Ser69Leu	View
A	G	28996	N	28996A>G	p.Gln241Gln	View
C	A	20740	ORF1ab	20740C>A	p.Gln6826Lys	View
G	T	15243	ORF1ab	15243G>T	p.Met4993Ile	View
G	T	19525	ORF1ab	19525G>T	p.Asp6421Tyr	View
C	T	9447	ORF1ab	9447C>T	p.Ala3061Val	View
C	T	25046	S	25046C>T	p.Pro1162Ser	View
G	T	20438	ORF1ab	20438G>T	p.Ser6725Ile	View
G	T	27676	ORF7a	27676G>T	p.Glu95*	View
C	T	12616	ORF1ab	12616C>T	p.Asp4117Asp	View
G	T	16975	ORF1ab	16975G>T	p.Val5571Phe	View
G	T	21795	S	21795G>T	p.Arg78Met	View
T	C	9037	ORF1ab	9037T>C	p.Asp2924Asp	View
G	T	18498	ORF1ab	18498G>T	p.Met6078Ile	View
C	A	29741	S	29741C>A		View
T	C	27851	ORF7b	27851T>C	p.Leu32Leu	View
G	A	29745	S	29745G>A		View
C	T	11812	ORF1ab	11812C>T	p.Gly3849Gly	View
C	T	15857	ORF1ab	15857C>T	p.Thr5198Ile	View
A	G	25531	ORF3a	25531A>G	p.Ile47Val	View
T	C	833	ORF1ab	833T>C	p.Phe190Leu	View
T	C	7549	ORF1ab	7549T>C	p.Asn2428Asn	View
C	T	9451	ORF1ab	9451C>T	p.Tyr3062Tyr	View
C	T	12085	ORF1ab	12085C>T	p.Thr3940Thr	View
C	T	13431	ORF1ab	13431C>T	p.Pro4389Leu	View
C	T	18204	ORF1ab	18204C>T	p.Ile5980Ile	View
A	G	18825	ORF1ab	18825A>G	p.Gln6187Gln	View
G	T	25644	ORF3a	25644G>T	p.Leu84Leu	View
G	A	11245	ORF1ab	11245G>A	p.Val3660Val	View
G	C	28812	N	28812G>C	p.Ser180Thr	View
C	T	18652	ORF1ab	18652C>T	p.Arg6130Cys	View
G	A	5857	ORF1ab	5857G>A	p.Thr1864Thr	View
C	T	28439	N	28439C>T	p.Leu56Phe	View
A	G	187	ORF1ab	187A>G		View
G	A	8977	ORF1ab	8977G>A	p.Glu2904Glu	View
C	T	16017	ORF1ab	16017C>T	p.Phe5251Phe	View
C	T	17410	ORF1ab	17410C>T	p.Arg5716Cys	View
C	A	24718	S	24718C>A	p.Phe1052Leu	View
T	C	27212	ORF6	27212T>C	p.Leu4Pro	View
G	T	27561	ORF7a	27561G>T	p.Leu56Leu	View
A	T	29752	S	29752A>T		View
T	G	29753	S	29753T>G		View
T	A	29758	S	29758T>A		View
A	C	18468	ORF1ab	18468A>C	p.Gly6068Gly	View
C	T	29245	N	29245C>T	p.Val324Val	View
T	C	43	ORF1ab	43T>C		View
A	G	2568	ORF1ab	2568A>G	p.Gln768Arg	View
G	T	14857	ORF1ab	14857G>T	p.Val4865Phe	View
G	A	25424	ORF3a	25424G>A	p.Gly11Glu	View
A	G	10855	ORF1ab	10855A>G	p.Ser3530Ser	View
C	T	27782	ORF7b	27782C>T	p.Phe9Phe	View
G	A	3482	ORF1ab	3482G>A	p.Gly1073Arg	View
G	C	25145	S	25145G>C	p.Glu1195Gln	View
C	T	190	ORF1ab	190C>T		View
A	C	10081	ORF1ab	10081A>C	p.Pro3272Pro	View
G	T	1148	ORF1ab	1148G>T	p.Gly295Cys	View
A	G	2903	ORF1ab	2903A>G	p.Ile880Val	View
T	C	7247	ORF1ab	7247T>C	p.Phe2328Leu	View
G	A	21778	S	21778G>A	p.Gly72Gly	View
C	T	27002	M	27002C>T	p.Asp160Asp	View
G	A	529	ORF1ab	529G>A	p.Leu88Leu	View
A	G	22259	S	22259A>G	p.Ile233Val	View
C	T	24745	S	24745C>T	p.Val1061Val	View
G	T	28690	N	28690G>T	p.Leu139Phe	View
G	T	26595	M	26595G>T	p.Gly25Cys	View
C	T	8956	ORF1ab	8956C>T	p.Tyr2897Tyr	View
G	C	12032	ORF1ab	12032G>C	p.Gly3923Arg	View
G	T	18636	ORF1ab	18636G>T	p.Val6124Val	View
C	T	8748	ORF1ab	8748C>T	p.Ala2828Val	View
A	G	4094	ORF1ab	4094A>G	p.Thr1277Ala	View
G	A	22427	S	22427G>A	p.Val289Ile	View
C	T	22522	S	22522C>T	p.Val320Val	View
C	T	21914	S	21914C>T	p.Leu118Phe	View
C	T	1997	ORF1ab	1997C>T	p.Leu578Leu	View
T	C	24544	S	24544T>C	p.Asp994Asp	View
A	G	538	ORF1ab	538A>G	p.Glu91Glu	View
T	C	9107	ORF1ab	9107T>C	p.Leu2948Leu	View
G	T	19861	ORF1ab	19861G>T	p.Ala6533Ser	View
C	T	3924	ORF1ab	3924C>T	p.Pro1220Leu	View
G	A	21824	S	21824G>A	p.Asp88Asn	View
T	C	29515	N	29515T>C	p.Ala414Ala	View
T	C	28019	ORF8	28019T>C	p.Tyr42Tyr	View
T	A	2593	ORF1ab	2593T>A	p.Ala776Ala	View
G	T	4936	ORF1ab	4936G>T	p.Lys1557Asn	View
T	A	21369	ORF1ab	21369T>A	p.Ile7035Ile	View
C	T	29416	N	29416C>T	p.Ala381Ala	View
A	G	21625	S	21625A>G	p.Arg21Arg	View
G	A	21901	S	21901G>A	p.Lys113Lys	View
A	C	25505	ORF3a	25505A>C	p.Gln38Pro	View
G	A	26167	ORF3a	26167G>A	p.Val259Ile	View
C	A	119	ORF1ab	119C>A		View
T	C	9208	ORF1ab	9208T>C	p.Ser2981Ser	View
T	C	10372	ORF1ab	10372T>C	p.Ile3369Ile	View
G	A	17411	ORF1ab	17411G>A	p.Arg5716His	View
T	C	17751	ORF1ab	17751T>C	p.Ala5829Ala	View
G	A	18397	ORF1ab	18397G>A	p.Val6045Ile	View
A	G	22459	S	22459A>G	p.Thr299Thr	View
C	T	25487	ORF3a	25487C>T	p.Thr32Ile	View
A	G	29191	N	29191A>G	p.Gln306Gln	View
A	G	23172	S	23172A>G	p.Lys537Arg	View
T	A	29710	S	29710T>A		View
T	C	469	ORF1ab	469T>C	p.Tyr68Tyr	View
C	T	6538	ORF1ab	6538C>T	p.Gly2091Gly	View
C	T	9073	ORF1ab	9073C>T	p.Thr2936Thr	View
G	T	11243	ORF1ab	11243G>T	p.Val3660Leu	View
C	T	15048	ORF1ab	15048C>T	p.Ile4928Ile	View
A	G	11728	ORF1ab	11728A>G	p.Arg3821Arg	View
A	G	4548	ORF1ab	4548A>G	p.Lys1428Arg	View
C	T	17949	ORF1ab	17949C>T	p.Gly5895Gly	View
T	C	6969	ORF1ab	6969T>C	p.Leu2235Pro	View
G	T	7829	ORF1ab	7829G>T	p.Val2522Phe	View
T	C	18168	ORF1ab	18168T>C	p.Pro5968Pro	View
C	T	21627	S	21627C>T	p.Thr22Ile	View
G	C	24445	S	24445G>C	p.Thr961Thr	View
G	A	25522	ORF3a	25522G>A	p.Gly44Arg	View
G	A	27890	ORF8	27890G>A		View
G	A	29864	S	29864G>A		View
ATG	A	29866	S	29866ATG>A		View
C	T	1929	ORF1ab	1929C>T	p.Ala555Val	View
A	G	8072	ORF1ab	8072A>G	p.Asn2603Asp	View
G	A	26730	M	26730G>A	p.Val70Ile	View
A	C	5	ORF1ab	5A>C		View
C	T	6267	ORF1ab	6267C>T	p.Ala2001Val	View
C	T	7423	ORF1ab	7423C>T	p.Phe2386Phe	View
C	T	11416	ORF1ab	11416C>T	p.Leu3717Leu	View
C	T	21191	ORF1ab	21191C>T	p.Ala6976Val	View
G	A	2720	ORF1ab	2720G>A	p.Ala819Thr	View
G	T	6463	ORF1ab	6463G>T	p.Val2066Val	View
C	T	7044	ORF1ab	7044C>T	p.Pro2260Leu	View
A	T	24232	S	24232A>T	p.Ala890Ala	View
A	G	22	ORF1ab	22A>G		View
C	T	874	ORF1ab	874C>T	p.Asp203Asp	View
T	C	20273	ORF1ab	20273T>C	p.Met6670Thr	View
C	T	26894	M	26894C>T	p.Leu124Leu	View
C	T	27323	ORF6	27323C>T	p.Ser41Phe	View
T	C	24063	S	24063T>C	p.Ile834Thr	View
G	T	25444	ORF3a	25444G>T	p.Gly18Cys	View
A	G	2775	ORF1ab	2775A>G	p.Lys837Arg	View
G	A	16065	ORF1ab	16065G>A	p.Gln5267Gln	View
A	G	23534	S	23534A>G	p.Asn658Asp	View
G	A	26143	ORF3a	26143G>A	p.Gly251Ser	View
A	C	10219	ORF1ab	10219A>C	p.Glu3318Asp	View
A	G	10780	ORF1ab	10780A>G	p.Leu3505Leu	View
C	T	28290	N	28290C>T	p.Pro6Leu	View
G	T	17035	ORF1ab	17035G>T	p.Ala5591Ser	View
C	T	26846	M	26846C>T	p.Ser108Ser	View
C	T	26895	M	26895C>T	p.His125Tyr	View
T	C	20757	ORF1ab	20757T>C	p.Ser6831Ser	View
C	T	27635	ORF7a	27635C>T	p.Ser81Leu	View
T	C	1510	ORF1ab	1510T>C	p.Gly415Gly	View
G	T	3473	ORF1ab	3473G>T	p.Gly1070Cys	View
G	T	5515	ORF1ab	5515G>T	p.Val1750Val	View
C	T	10036	ORF1ab	10036C>T	p.Ile3257Ile	View
C	T	28732	N	28732C>T	p.Asn153Asn	View
C	T	23103	S	23103C>T	p.Ser514Phe	View
A	C	1856	ORF1ab	1856A>C	p.Ser531Arg	View
A	G	5989	ORF1ab	5989A>G	p.Thr1908Thr	View
C	T	9679	ORF1ab	9679C>T	p.Phe3138Phe	View
C	T	12242	ORF1ab	12242C>T	p.Arg3993Cys	View
C	T	14358	ORF1ab	14358C>T	p.Cys4698Cys	View
G	A	18583	ORF1ab	18583G>A	p.Val6107Ile	View
T	A	21775	S	21775T>A	p.Ser71Ser	View
A	G	831	ORF1ab	831A>G	p.Asn189Ser	View
T	C	1562	ORF1ab	1562T>C	p.Cys433Arg	View
A	G	3262	ORF1ab	3262A>G	p.Thr999Thr	View
T	C	3745	ORF1ab	3745T>C	p.His1160His	View
A	G	10828	ORF1ab	10828A>G	p.Gly3521Gly	View
T	C	11343	ORF1ab	11343T>C	p.Ile3693Thr	View
G	A	1584	ORF1ab	1584G>A	p.Gly440Glu	View
C	A	3768	ORF1ab	3768C>A	p.Thr1168Asn	View
T	C	9721	ORF1ab	9721T>C	p.His3152His	View
T	C	12748	ORF1ab	12748T>C	p.Thr4161Thr	View
C	T	13356	ORF1ab	13356C>T	p.Thr4364Ile	View
G	T	17331	ORF1ab	17331G>T	p.Glu5689Asp	View
C	T	19955	ORF1ab	19955C>T	p.Thr6564Ile	View
G	C	26062	ORF3a	26062G>C	p.Gly224Arg	View
G	T	28851	N	28851G>T	p.Ser193Ile	View
A	T	1260	ORF1ab	1260A>T	p.Gln332Leu	View
C	T	9443	ORF1ab	9443C>T	p.Leu3060Phe	View
G	T	23624	S	23624G>T	p.Ala688Ser	View
G	T	28632	N	28632G>T	p.Gly120Val	View
G	T	25494	ORF3a	25494G>T	p.Thr34Thr	View
G	A	11842	ORF1ab	11842G>A	p.Gln290Gln	View
A	G	12759	ORF1ab	12759A>G	p.Asp4165Gly	View
G	T	18292	ORF1ab	18292G>T	p.Ala6010Ser	View
T	C	22672	S	22672T>C	p.Asn370Asn	View
C	T	3876	ORF1ab	3876C>T	p.Ala1204Val	View
C	T	6428	ORF1ab	6428C>T	p.Pro2055Ser	View
G	T	18412	ORF1ab	18412G>T	p.Val6050Phe	View
G	T	14122	ORF1ab	14122G>T	p.Gly4620Cys	View
A	G	20559	ORF1ab	20559A>G	p.Val6765Val	View
G	T	26389	E	26389G>T	p.Val49Leu	View
A	C	28900	N	28900A>C	p.Arg209Ser	View
C	T	20384	ORF1ab	20384C>T	p.Ala6707Val	View
A	G	28505	N	28505A>G	p.Ser78Gly	View
C	A	1780	ORF1ab	1780C>A	p.Ser505Ser	View
T	C	27402	ORF7a	27402T>C	p.Ile3Ile	View
T	C	27901	ORF8	27901T>C	p.Phe3Ser	View
C	T	8692	ORF1ab	8692C>T	p.Tyr2809Tyr	View
A	G	11763	ORF1ab	11763A>G	p.Asn3833Ser	View
G	T	12243	ORF1ab	12243G>T	p.Arg3993Leu	View
C	T	26198	ORF3a	26198C>T	p.Thr269Met	View
C	T	14097	ORF1ab	14097C>T	p.Phe4611Phe	View
T	G	19425	ORF1ab	19425T>G	p.Asp6387Glu	View
G	T	28436	N	28436G>T	p.Ala55Ser	View
G	T	21204	ORF1ab	21204G>T	p.Lys6980Asn	View
T	C	5824	ORF1ab	5824T>C	p.Leu1853Leu	View
G	A	15538	ORF1ab	15538G>A	p.Val5092Ile	View
T	C	19215	ORF1ab	19215T>C	p.Tyr6317Tyr	View
G	A	26049	ORF3a	26049G>A	p.Leu219Leu	View
A	G	20553	ORF1ab	20553A>G	p.Leu6763Leu	View
C	T	19102	ORF1ab	19102C>T	p.Pro6280Ser	View
G	A	388	ORF1ab	388G>A	p.Glu41Glu	View
T	G	877	ORF1ab	877T>G	p.Leu204Leu	View
T	C	16419	ORF1ab	16419T>C	p.Thr5385Thr	View
C	A	22502	S	22502C>A	p.Gln314Lys	View
A	G	24430	S	24430A>G	p.Ala956Ala	View
C	T	98	ORF1ab	98C>T		View
G	A	1280	ORF1ab	1280G>A	p.Ala339Thr	View
C	T	1812	ORF1ab	1812C>T	p.Ala516Val	View
A	G	2475	ORF1ab	2475A>G	p.Lys737Arg	View
C	T	9532	ORF1ab	9532C>T	p.Phe3089Phe	View
C	T	16470	ORF1ab	16470C>T	p.Pro5402Pro	View
C	T	21930	S	21930C>T	p.Ala123Val	View
C	G	193	ORF1ab	193C>G		View
T	C	6602	ORF1ab	6602T>C	p.Leu2113Leu	View
T	C	24951	S	24951T>C	p.Ile1130Thr	View
G	A	16014	ORF1ab	16014G>A	p.Arg5250Arg	View
T	C	17353	ORF1ab	17353T>C	p.Phe5697Leu	View
G	T	25641	ORF3a	25641G>T	p.Leu83Phe	View
A	T	27510	ORF7a	27510A>T	p.Thr39Thr	View
G	T	11150	ORF1ab	11150G>T	p.Val3629Phe	View
T	A	16695	ORF1ab	16695T>A	p.Thr5477Thr	View
G	T	2086	ORF1ab	2086G>T	p.Gln607His	View
C	T	9474	ORF1ab	9474C>T	p.Ala3070Val	View
G	T	11113	ORF1ab	11113G>T	p.Met3616Ile	View
G	A	28875	N	28875G>A	p.Ser201Asn	View
A	G	2646	ORF1ab	2646A>G	p.Lys794Arg	View
C	A	3987	ORF1ab	3987C>A	p.Thr1241Lys	View
C	T	2388	ORF1ab	2388C>T	p.Thr708Ile	View
A	G	19326	ORF1ab	19326A>G	p.Pro6354Pro	View
C	T	25924	ORF3a	25924C>T	p.Pro178Ser	View
A	T	27690	ORF7a	27690A>T	p.Pro99Pro	View
A	G	12444	ORF1ab	12444A>G	p.Asn4060Ser	View
G	T	16496	ORF1ab	16496G>T	p.Gly5411Val	View
C	A	17135	ORF1ab	17135C>A	p.Pro5624His	View
G	C	6479	ORF1ab	6479G>C	p.Val2072Leu	View
C	T	7081	ORF1ab	7081C>T	p.Asn2272Asn	View
T	C	19119	ORF1ab	19119T>C	p.Ala6285Ala	View
A	G	4892	ORF1ab	4892A>G	p.Thr1543Ala	View
C	T	311	ORF1ab	311C>T	p.Leu16Phe	View
C	T	17470	ORF1ab	17470C>T	p.Leu5736Leu	View
T	C	25525	ORF3a	25525T>C	p.Trp45Arg	View
G	T	25769	ORF3a	25769G>T	p.Arg126Met	View
C	T	103	ORF1ab	103C>T		View
C	A	3809	ORF1ab	3809C>A	p.Leu1182Ile	View
G	T	7743	ORF1ab	7743G>T	p.Ser2493Ile	View
G	T	15016	ORF1ab	15016G>T	p.Ala4918Ser	View
C	T	16049	ORF1ab	16049C>T	p.Thr5262Ile	View
A	T	27579	ORF7a	27579A>T	p.Gln62His	View
C	T	4296	ORF1ab	4296C>T	p.Thr1344Ile	View
T	C	15326	ORF1ab	15326T>C	p.Met5021Thr	View
G	T	27706	ORF7a	27706G>T	p.Ala105Ser	View
C	T	3165	ORF1ab	3165C>T	p.Ala967Val	View
C	T	8597	ORF1ab	8597C>T	p.Leu2778Phe	View
G	T	25681	ORF3a	25681G>T	p.Val97Phe	View
C	T	504	ORF1ab	504C>T	p.Pro80Leu	View
G	T	3152	ORF1ab	3152G>T	p.Gly963Cys	View
C	A	3159	ORF1ab	3159C>A	p.Thr965Asn	View
C	T	17703	ORF1ab	17703C>T	p.Asn5813Asn	View
A	G	18174	ORF1ab	18174A>G	p.Ile5970Met	View
C	T	24466	S	24466C>T	p.Ser968Ser	View
C	T	17745	ORF1ab	17745C>T	p.Asn5827Asn	View
T	C	22283	S	22283T>C	p.Leu241Leu	View
G	T	23311	S	23311G>T	p.Glu583Asp	View
C	T	21	ORF1ab	21C>T		View
T	C	18669	ORF1ab	18669T>C	p.Cys6135Cys	View
T	C	26729	M	26729T>C	p.Ala69Ala	View
G	A	18803	ORF1ab	18803G>A	p.Ser6180Asn	View
T	C	16977	ORF1ab	16977T>C	p.Val5571Val	View
A	G	5891	ORF1ab	5891A>G	p.Thr1876Ala	View
C	T	10449	ORF1ab	10449C>T	p.Pro3395Leu	View
C	T	13378	ORF1ab	13378C>T	p.Thr4371Thr	View
T	C	22658	S	22658T>C	p.Ser366Pro	View
C	T	24031	S	24031C>T	p.Phe823Phe	View
C	T	959	ORF1ab	959C>T	p.Arg232Cys	View
T	A	1482	ORF1ab	1482T>A	p.Phe406Tyr	View
A	G	15063	ORF1ab	15063A>G	p.Gln4933Gln	View
T	C	17407	ORF1ab	17407T>C	p.Leu5715Leu	View
A	G	22255	S	22255A>G	p.Ile231Met	View
A	G	25105	S	25105A>G	p.Lys1181Lys	View
G	A	25234	S	25234G>A	p.Leu1224Leu	View
T	G	27205	ORF6	27205T>G	p.Phe2Val	View
A	T	27353	ORF6	27353A>T	p.Gln51Leu	View
C	T	28892	N	28892C>T	p.Pro207Ser	View
A	G	681	ORF1ab	681A>G	p.Asp139Gly	View
G	A	3582	ORF1ab	3582G>A	p.Ser1106Asn	View
G	T	9463	ORF1ab	9463G>T	p.Arg3066Ser	View
A	T	24041	S	24041A>T	p.Thr827Ser	View
C	A	233	ORF1ab	233C>A		View
A	T	4558	ORF1ab	4558A>T	p.Val1431Val	View
G	T	8105	ORF1ab	8105G>T	p.Ala2614Ser	View
T	C	25610	ORF3a	25610T>C	p.Leu73Pro	View
A	G	7929	ORF1ab	7929A>G	p.Lys2555Arg	View
T	C	9757	ORF1ab	9757T>C	p.Arg3164Arg	View
G	T	13348	ORF1ab	13348G>T	p.Val4361Val	View
G	T	24434	S	24434G>T	p.Ala958Ser	View
G	A	25593	ORF3a	25593G>A	p.Lys67Lys	View
G	T	29315	N	29315G>T	p.Asp348Tyr	View
T	A	16324	ORF1ab	16324T>A	p.Cys5354Ser	View
A	G	28653	N	28653A>G	p.Lys127Arg	View
C	T	475	ORF1ab	475C>T	p.Phe70Phe	View
A	G	23140	S	23140A>G	p.Gly526Gly	View
A	T	28389	N	28389A>T	p.Gln39Leu	View
C	T	29837	S	29837C>T		View
C	T	4226	ORF1ab	4226C>T	p.Pro1321Ser	View
A	C	7837	ORF1ab	7837A>C	p.Leu2524Phe	View
G	T	19677	ORF1ab	19677G>T	p.Gln6471His	View
G	T	29744	S	29744G>T		View
C	T	7504	ORF1ab	7504C>T	p.Tyr2413Tyr	View
G	T	16945	ORF1ab	16945G>T	p.Ala5561Ser	View
G	A	18580	ORF1ab	18580G>A	p.Val6106Ile	View
A	T	23324	S	23324A>T	p.Thr588Ser	View
G	A	5657	ORF1ab	5657G>A	p.Val1798Ile	View
G	A	571	ORF1ab	571G>A	p.Glu102Glu	View
C	T	7318	ORF1ab	7318C>T	p.Phe2351Phe	View
C	T	8334	ORF1ab	8334C>T	p.Ala2690Val	View
G	T	21372	ORF1ab	21372G>T	p.Gln7036His	View
G	T	25340	S	25340G>T	p.Asp1260Tyr	View
A	G	28984	N	28984A>G	p.Lys237Lys	View
T	G	6405	ORF1ab	6405T>G	p.Val2047Gly	View
C	T	14919	ORF1ab	14919C>T	p.Val4885Val	View
G	A	11464	ORF1ab	11464G>A	p.Met3733Ile	View
T	C	5785	ORF1ab	5785T>C	p.Thr1840Thr	View
C	T	7108	ORF1ab	7108C>T	p.Tyr2281Tyr	View
A	T	28294	N	28294A>T	p.Gln7His	View
G	T	10846	ORF1ab	10846G>T	p.Met3527Ile	View
G	A	14316	ORF1ab	14316G>A	p.Gln4684Gln	View
G	A	3353	ORF1ab	3353G>A	p.Gly1030Ser	View
G	T	13193	ORF1ab	13193G>T	p.Val4310Phe	View
C	T	13821	ORF1ab	13821C>T	p.Leu4519Leu	View
T	C	17136	ORF1ab	17136T>C	p.Pro5624Pro	View
C	T	29732	S	29732C>T		View
G	T	1210	ORF1ab	1210G>T	p.Met315Ile	View
A	G	3872	ORF1ab	3872A>G	p.Ile1203Val	View
G	T	12067	ORF1ab	12067G>T	p.Met3934Ile	View
C	T	13667	ORF1ab	13667C>T	p.Thr4468Ile	View
G	T	15957	ORF1ab	15957G>T	p.Gly5231Gly	View
A	T	27865	ORF7b	27865A>T	p.His37Leu	View
T	A	27866	ORF7b	27866T>A	p.His37Gln	View
T	A	29785	S	29785T>A		View
A	G	8584	ORF1ab	8584A>G	p.Leu2773Leu	View
G	T	13094	ORF1ab	13094G>T	p.Ala4277Ser	View
G	A	14187	ORF1ab	14187G>A	p.Arg4641Arg	View
G	T	5429	ORF1ab	5429G>T	p.Val1722Leu	View
T	C	5863	ORF1ab	5863T>C	p.Val1866Val	View
C	A	23373	S	23373C>A	p.Thr604Asn	View
C	A	26151	ORF3a	26151C>A	p.Ser253Ser	View
C	T	28006	ORF8	28006C>T	p.Pro38Leu	View
C	T	28435	N	28435C>T	p.Thr54Thr	View
G	A	5437	ORF1ab	5437G>A	p.Glu1724Glu	View
A	C	5958	ORF1ab	5958A>C	p.Asn1898Thr	View
G	A	6877	ORF1ab	6877G>A	p.Lys2204Lys	View
C	A	14195	ORF1ab	14195C>A	p.Thr4644Asn	View
G	A	25912	ORF3a	25912G>A	p.Gly174Ser	View
G	A	20962	ORF1ab	20962G>A	p.Asp6900Asn	View
G	A	28631	N	28631G>A	p.Gly120Arg	View
T	C	4640	ORF1ab	4640T>C	p.Leu1459Leu	View
T	C	4839	ORF1ab	4839T>C	p.Ile1525Thr	View
T	A	22348	S	22348T>A	p.Ala262Ala	View
C	T	878	ORF1ab	878C>T	p.Leu205Leu	View
T	C	17355	ORF1ab	17355T>C	p.Phe5697Phe	View
T	G	23287	S	23287T>G	p.Ala575Ala	View
C	T	10782	ORF1ab	10782C>T	p.Thr3506Ile	View
T	C	27919	ORF8	27919T>C	p.Ile9Thr	View
G	A	5554	ORF1ab	5554G>A	p.Lys1763Lys	View
A	G	12841	ORF1ab	12841A>G	p.Lys4192Lys	View
T	C	15117	ORF1ab	15117T>C	p.Gly4951Gly	View
C	T	15141	ORF1ab	15141C>T	p.Thr4959Thr	View
G	T	18397	ORF1ab	18397G>T	p.Val6045Leu	View
A	C	19703	ORF1ab	19703A>C	p.Asn6480Thr	View
T	A	23434	S	23434T>A	p.Ile624Ile	View
G	T	27478	ORF7a	27478G>T	p.Val29Leu	View
C	T	15081	ORF1ab	15081C>T	p.Ala4939Ala	View
A	G	6360	ORF1ab	6360A>G	p.Asp2032Gly	View
T	C	8227	ORF1ab	8227T>C	p.Cys2654Cys	View
A	G	9701	ORF1ab	9701A>G	p.Ile3146Val	View
G	T	16795	ORF1ab	16795G>T	p.Val5511Leu	View
G	T	19690	ORF1ab	19690G>T	p.Val6476Phe	View
C	T	23220	S	23220C>T	p.Thr553Ile	View
A	T	27086	M	27086A>T	p.Ala188Ala	View
C	T	17528	ORF1ab	17528C>T	p.Thr5755Ile	View
A	C	19314	ORF1ab	19314A>C	p.Ala6350Ala	View
C	A	25162	S	25162C>A	p.Leu1200Leu	View
G	T	27000	M	27000G>T	p.Asp160Tyr	View
G	T	1544	ORF1ab	1544G>T	p.Ala427Ser	View
G	T	15372	ORF1ab	15372G>T	p.Thr5036Thr	View
G	T	27147	M	27147G>T	p.Asp209Tyr	View
A	T	13722	ORF1ab	13722A>T	p.Pro4486Pro	View
C	T	26752	M	26752C>T	p.Thr77Ile	View
T	A	4579	ORF1ab	4579T>A	p.Leu1438Leu	View
T	C	7771	ORF1ab	7771T>C	p.His2502His	View
C	T	8733	ORF1ab	8733C>T	p.Thr2823Ile	View
C	T	14670	ORF1ab	14670C>T	p.Val4802Val	View
G	A	14718	ORF1ab	14718G>A	p.Lys4818Lys	View
A	G	23586	S	23586A>G	p.Gln675Arg	View
T	C	24202	S	24202T>C	p.Gly880Gly	View
G	T	25775	ORF3a	25775G>T	p.Trp128Leu	View
T	C	26130	ORF3a	26130T>C	p.Ile246Ile	View
G	A	20691	ORF1ab	20691G>A	p.Met6809Ile	View
C	T	5812	ORF1ab	5812C>T	p.Asp1849Asp	View
G	T	6094	ORF1ab	6094G>T	p.Gln1943His	View
T	C	6523	ORF1ab	6523T>C	p.Ile2086Ile	View
G	A	8179	ORF1ab	8179G>A	p.Arg2638Arg	View
G	T	14587	ORF1ab	14587G>T	p.Ala4775Ser	View
C	T	15216	ORF1ab	15216C>T	p.Ser4984Ser	View
A	T	28295	N	28295A>T	p.Asn8Tyr	View
A	G	11211	ORF1ab	11211A>G	p.Tyr3649Cys	View
A	T	26676	M	26676A>T	p.Ile52Phe	View
G	T	18816	ORF1ab	18816G>T	p.Leu6184Leu	View
A	G	25296	S	25296A>G	p.Lys1245Arg	View
C	T	392	ORF1ab	392C>T	p.Arg43Cys	View
C	T	1572	ORF1ab	1572C>T	p.Thr436Ile	View
C	T	16386	ORF1ab	16386C>T	p.Cys5374Cys	View
C	T	1409	ORF1ab	1409C>T	p.His382Tyr	View
C	T	14016	ORF1ab	14016C>T	p.Phe4584Phe	View
G	A	4859	ORF1ab	4859G>A	p.Asp1532Asn	View
G	A	24124	S	24124G>A	p.Lys854Lys	View
G	T	28028	ORF8	28028G>T	p.Trp45Cys	View
A	T	25093	S	25093A>T	p.Val1177Val	View
C	T	3040	ORF1ab	3040C>T	p.Tyr925Tyr	View
T	G	19797	ORF1ab	19797T>G	p.Ala6511Ala	View
T	C	25586	ORF3a	25586T>C	p.Leu65Pro	View
C	T	2094	ORF1ab	2094C>T	p.Ser610Leu	View
C	T	13721	ORF1ab	13721C>T	p.Pro4486Leu	View
T	C	6221	ORF1ab	6221T>C	p.Leu1986Leu	View
G	T	7393	ORF1ab	7393G>T	p.Pro2376Pro	View
G	A	20578	ORF1ab	20578G>A	p.Val6772Met	View
T	C	232	ORF1ab	232T>C		View
T	C	19003	ORF1ab	19003T>C	p.Leu6247Leu	View
G	A	23518	S	23518G>A	p.Gly652Gly	View
C	T	8106	ORF1ab	8106C>T	p.Ala2614Val	View
T	C	10795	ORF1ab	10795T>C	p.Val3510Val	View
C	T	12374	ORF1ab	12374C>T	p.Leu4037Phe	View
C	T	18452	ORF1ab	18452C>T	p.Ala6063Val	View
T	C	28879	N	28879T>C	p.Ser202Ser	View
C	T	24198	S	24198C>T	p.Ala879Val	View
T	C	3154	ORF1ab	3154T>C	p.Gly963Gly	View
T	C	4125	ORF1ab	4125T>C	p.Val1287Ala	View
G	A	28904	N	28904G>A	p.Ala211Thr	View
A	C	29746	S	29746A>C		View
C	T	23997	S	23997C>T	p.Pro812Leu	View
G	T	29384	N	29384G>T	p.Asp371Tyr	View
C	T	1545	ORF1ab	1545C>T	p.Ala427Val	View
A	G	4316	ORF1ab	4316A>G	p.Ser1351Gly	View
T	A	8830	ORF1ab	8830T>A	p.Ala2855Ala	View
C	T	44	ORF1ab	44C>T		View
C	T	21059	ORF1ab	21059C>T	p.Pro6932Leu	View
G	A	27882	ORF7b	27882G>A	p.Ala43Thr	View
G	A	28090	ORF8	28090G>A	p.Gly66Asp	View
A	G	2406	ORF1ab	2406A>G	p.Lys714Arg	View
A	G	5780	ORF1ab	5780A>G	p.Ile1839Val	View
G	T	15452	ORF1ab	15452G>T	p.Gly5063Val	View
A	G	15657	ORF1ab	15657A>G	p.Thr5131Thr	View
G	T	22708	S	22708G>T	p.Val382Val	View
C	A	22006	S	22006C>A	p.Asn148Lys	View
A	G	24864	S	24864A>G	p.His1101Arg	View
T	A	28010	ORF8	28010T>A	p.Ile39Ile	View
C	A	4226	ORF1ab	4226C>A	p.Pro1321Thr	View
A	C	29355	N	29355A>C	p.Lys361Thr	View
A	G	1916	ORF1ab	1916A>G	p.Thr551Ala	View
G	T	25595	ORF3a	25595G>T	p.Arg68Ile	View
T	C	28921	N	28921T>C	p.Asp216Asp	View
A	G	9750	ORF1ab	9750A>G	p.Lys3162Arg	View
G	T	18525	ORF1ab	18525G>T	p.Val6087Val	View
C	T	11816	ORF1ab	11816C>T	p.Pro3851Ser	View
C	T	1441	ORF1ab	1441C>T	p.Gly392Gly	View
A	C	2132	ORF1ab	2132A>C	p.Lys623Gln	View
G	A	12817	ORF1ab	12817G>A	p.Leu4184Leu	View
G	A	5036	ORF1ab	5036G>A	p.Gly1591Arg	View
C	T	21219	ORF1ab	21219C>T	p.Phe6985Phe	View
C	T	958	ORF1ab	958C>T	p.Cys231Cys	View
T	C	19135	ORF1ab	19135T>C	p.Leu6291Leu	View
C	A	22188	S	22188C>A	p.Pro209His	View
A	T	22941	S	22941A>T	p.Asn460Ile	View
A	C	24936	S	24936A>C	p.Asn1125Thr	View
G	T	26049	ORF3a	26049G>T	p.Leu219Phe	View
A	C	15641	ORF1ab	15641A>C	p.Asn5126Thr	View
G	T	6337	ORF1ab	6337G>T	p.Ser2024Ser	View
C	T	22564	S	22564C>T	p.Asn334Asn	View
C	T	912	ORF1ab	912C>T	p.Ser216Phe	View
T	C	4786	ORF1ab	4786T>C	p.Leu1507Leu	View
C	A	25626	ORF3a	25626C>A	p.His78Gln	View
G	T	19645	ORF1ab	19645G>T	p.Val6461Phe	View
A	T	23989	S	23989A>T	p.Pro809Pro	View
A	G	26019	ORF3a	26019A>G	p.Ser209Ser	View
A	C	28254	ORF8	28254A>C	p.Ile121Leu	View
T	C	28588	N	28588T>C	p.Ser105Ser	View
T	A	3466	ORF1ab	3466T>A	p.His1067Gln	View
T	A	12122	ORF1ab	12122T>A	p.Ser3953Thr	View
C	T	6927	ORF1ab	6927C>T	p.Pro2221Leu	View
C	A	14184	ORF1ab	14184C>A	p.Thr4640Thr	View
G	C	26416	E	26416G>C	p.Val58Leu	View
T	C	5218	ORF1ab	5218T>C	p.Asn1651Asn	View
C	G	21658	S	21658C>G	p.Phe32Leu	View
G	T	27281	ORF6	27281G>T	p.Trp27Leu	View
C	T	1758	ORF1ab	1758C>T	p.Ala498Val	View
C	T	14206	ORF1ab	14206C>T	p.His4648Tyr	View
T	C	17009	ORF1ab	17009T>C	p.Ile5582Thr	View
T	C	1783	ORF1ab	1783T>C	p.Cys506Cys	View
G	T	6320	ORF1ab	6320G>T	p.Val2019Phe	View
T	C	10048	ORF1ab	10048T>C	p.Val3261Val	View
G	T	10178	ORF1ab	10178G>T	p.Val3305Leu	View
G	A	17601	ORF1ab	17601G>A	p.Leu5779Leu	View
G	A	22638	S	22638G>A	p.Ser359Asn	View
C	T	3773	ORF1ab	3773C>T	p.Arg1170Cys	View
G	T	17302	ORF1ab	17302G>T	p.Val5680Phe	View
A	T	24253	S	24253A>T	p.Pro897Pro	View
G	T	29808	S	29808G>T		View
G	A	198	ORF1ab	198G>A		View
T	C	20748	ORF1ab	20748T>C	p.Tyr6828Tyr	View
G	T	1439	ORF1ab	1439G>T	p.Gly392Cys	View
C	T	2607	ORF1ab	2607C>T	p.Thr781Ile	View
A	G	14634	ORF1ab	14634A>G	p.Val4790Val	View
G	A	3716	ORF1ab	3716G>A	p.Ala1151Thr	View
C	T	10543	ORF1ab	10543C>T	p.His3426His	View
G	T	20134	ORF1ab	20134G>T	p.Val6624Leu	View
G	T	24926	S	24926G>T	p.Val1122Leu	View
A	G	29350	N	29350A>G	p.Ala359Ala	View
A	G	2923	ORF1ab	2923A>G	p.Val886Val	View
C	T	4890	ORF1ab	4890C>T	p.Thr1542Ile	View
G	A	8353	ORF1ab	8353G>A	p.Ala2696Ala	View
T	C	9289	ORF1ab	9289T>C	p.Asn3008Asn	View
C	T	9808	ORF1ab	9808C>T	p.Cys3181Cys	View
G	T	13936	ORF1ab	13936G>T	p.Val4558Leu	View
C	T	7945	ORF1ab	7945C>T	p.Tyr2560Tyr	View
T	C	12134	ORF1ab	12134T>C	p.Phe3957Leu	View
T	A	16242	ORF1ab	16242T>A	p.Val5326Val	View
T	A	6379	ORF1ab	6379T>A	p.Asn2038Lys	View
C	T	12923	ORF1ab	12923C>T	p.Pro4220Ser	View
C	T	13384	ORF1ab	13384C>T	p.Cys4373Cys	View
C	T	14478	ORF1ab	14478C>T	p.Tyr4738Tyr	View
C	T	24795	S	24795C>T	p.Ala1078Val	View
T	C	25081	S	25081T>C	p.Asn1173Asn	View
C	T	27046	M	27046C>T	p.Thr175Met	View
A	G	28615	N	28615A>G	p.Gly114Gly	View
G	T	3085	ORF1ab	3085G>T	p.Glu940Asp	View
G	A	19656	ORF1ab	19656G>A	p.Lys6464Lys	View
C	T	21635	S	21635C>T	p.Pro25Ser	View
C	T	25267	S	25267C>T	p.Cys1235Cys	View
T	C	606	ORF1ab	606T>C	p.Ile114Thr	View
T	C	3034	ORF1ab	3034T>C	p.Ser923Ser	View
T	C	9217	ORF1ab	9217T>C	p.Cys2984Cys	View
G	T	7911	ORF1ab	7911G>T	p.Cys2549Phe	View
G	A	12332	ORF1ab	12332G>A	p.Ala4023Thr	View
G	T	17562	ORF1ab	17562G>T	p.Arg5766Arg	View
A	G	3078	ORF1ab	3078A>G	p.Glu938Gly	View
C	T	10834	ORF1ab	10834C>T	p.Ala3523Ala	View
A	G	15257	ORF1ab	15257A>G	p.Tyr4998Cys	View
T	A	8176	ORF1ab	8176T>A	p.Ala2637Ala	View
G	T	28239	ORF8	28239G>T	p.Val116Phe	View
C	T	23551	S	23551C>T	p.Asp663Asp	View
C	T	4331	ORF1ab	4331C>T	p.Leu1356Leu	View
G	T	26720	M	26720G>T	p.Val66Val	View
A	G	29731	S	29731A>G		View
C	A	6198	ORF1ab	6198C>A	p.Ser1978Tyr	View
C	A	1404	ORF1ab	1404C>A	p.Pro380His	View
T	C	1847	ORF1ab	1847T>C	p.Ser528Pro	View
C	T	2571	ORF1ab	2571C>T	p.Pro769Leu	View
T	C	3011	ORF1ab	3011T>C	p.Leu916Leu	View
C	T	13326	ORF1ab	13326C>T	p.Thr4354Ile	View
T	C	27869	ORF7b	27869T>C	p.Asn38Asn	View
T	G	28853	N	28853T>G	p.Ser194Ala	View
T	G	6905	ORF1ab	6905T>G	p.Ser2214Ala	View
G	A	20464	ORF1ab	20464G>A	p.Asp6734Asn	View
G	A	27955	ORF8	27955G>A	p.Ser21Asn	View
A	G	19310	ORF1ab	19310A>G	p.His6349Arg	View
T	G	26767	M	26767T>G	p.Ile82Ser	View
G	A	29440	N	29440G>A	p.Gln389Gln	View
C	T	28308	N	28308C>T	p.Ala12Val	View
G	T	28980	N	28980G>T	p.Gly236Val	View
C	A	2189	ORF1ab	2189C>A	p.Leu642Ile	View
G	A	24872	S	24872G>A	p.Val1104Ile	View
A	G	8170	ORF1ab	8170A>G	p.Ser2635Ser	View
C	T	4719	ORF1ab	4719C>T	p.Ala1485Val	View
G	T	6609	ORF1ab	6609G>T	p.Arg2115Ile	View
G	A	8372	ORF1ab	8372G>A	p.Val2703Ile	View
T	C	6334	ORF1ab	6334T>C	p.Asn2023Asn	View
A	G	3895	ORF1ab	3895A>G	p.Glu1210Glu	View
T	C	28642	N	28642T>C	p.Tyr123Tyr	View
C	A	24064	S	24064C>A	p.Ile834Ile	View
A	G	25472	ORF3a	25472A>G	p.Asp27Gly	View
T	C	11686	ORF1ab	11686T>C	p.Thr3807Thr	View
A	G	13433	ORF1ab	13433A>G	p.Met4390Val	View
C	T	28045	ORF8	28045C>T	p.Ala51Val	View
A	G	1078	ORF1ab	1078A>G	p.Pro271Pro	View
G	A	20348	ORF1ab	20348G>A	p.Ser6695Asn	View
G	T	27271	ORF6	27271G>T	p.Val24Phe	View
G	T	15594	ORF1ab	15594G>T	p.Lys5110Asn	View
A	G	6065	ORF1ab	6065A>G	p.Asn1934Asp	View
G	A	23073	S	23073G>A	p.Gly504Asp	View
C	T	6401	ORF1ab	6401C>T	p.Pro2046Ser	View
C	T	4173	ORF1ab	4173C>T	p.Thr1303Ile	View
C	T	14396	ORF1ab	14396C>T	p.Thr4711Ile	View
C	T	183	ORF1ab	183C>T		View
C	T	5621	ORF1ab	5621C>T	p.Pro1786Ser	View
C	T	8502	ORF1ab	8502C>T	p.Thr2746Ile	View
T	C	4789	ORF1ab	4789T>C	p.Ala1508Ala	View
A	G	10089	ORF1ab	10089A>G	p.Lys3275Arg	View
T	C	27483	ORF7a	27483T>C	p.Leu30Leu	View
G	T	2720	ORF1ab	2720G>T	p.Ala819Ser	View
G	T	17938	ORF1ab	17938G>T	p.Ala5892Ser	View
A	G	18030	ORF1ab	18030A>G	p.Ala5922Ala	View
C	T	11967	ORF1ab	11967C>T	p.Ala3901Val	View
A	G	20003	ORF1ab	20003A>G	p.Asp6580Gly	View
C	T	14183	ORF1ab	14183C>T	p.Thr4640Ile	View
T	C	23284	S	23284T>C	p.Asp574Asp	View
T	C	26488	M	26488T>C		View
A	G	27455	ORF7a	27455A>G	p.Gln21Arg	View
T	C	2785	ORF1ab	2785T>C	p.Asn840Asn	View
C	T	15951	ORF1ab	15951C>T	p.Ile5229Ile	View
G	C	22927	S	22927G>C	p.Leu455Phe	View
C	T	29011	N	29011C>T	p.Val246Val	View
A	G	13869	ORF1ab	13869A>G	p.Lys4535Lys	View
C	T	9298	ORF1ab	9298C>T	p.Tyr3011Tyr	View
A	T	22008	S	22008A>T	p.Asn149Ile	View
C	T	2508	ORF1ab	2508C>T	p.Pro748Leu	View
C	T	8208	ORF1ab	8208C>T	p.Thr2648Ile	View
C	T	13430	ORF1ab	13430C>T	p.Pro4389Ser	View
C	T	19402	ORF1ab	19402C>T	p.His6380Tyr	View
A	G	4328	ORF1ab	4328A>G	p.Ile1355Val	View
T	C	18909	ORF1ab	18909T>C	p.Val6215Val	View
A	G	25243	S	25243A>G	p.Ile1227Met	View
A	G	29827	S	29827A>G		View
C	T	4455	ORF1ab	4455C>T	p.Ala1397Val	View
G	T	15380	ORF1ab	15380G>T	p.Ser5039Ile	View
T	C	1339	ORF1ab	1339T>C	p.Gly358Gly	View
A	G	3193	ORF1ab	3193A>G	p.Glu976Glu	View
T	C	9628	ORF1ab	9628T>C	p.Ser3121Ser	View
A	C	9470	ORF1ab	9470A>C	p.Arg3069Arg	View
G	A	24977	S	24977G>A	p.Asp1139Asn	View
T	C	25666	ORF3a	25666T>C	p.Ser92Pro	View
G	A	2448	ORF1ab	2448G>A	p.Gly728Asp	View
T	C	15039	ORF1ab	15039T>C	p.Arg4925Arg	View
A	G	28117	ORF8	28117A>G	p.Asp75Gly	View
C	T	1288	ORF1ab	1288C>T	p.Cys341Cys	View
C	T	11050	ORF1ab	11050C>T	p.Val3595Val	View
C	T	22783	S	22783C>T	p.Val407Val	View
T	C	27597	ORF7a	27597T>C	p.Pro68Pro	View
T	C	28149	ORF8	28149T>C	p.Phe86Leu	View
A	G	29056	N	29056A>G	p.Lys261Lys	View
C	T	11868	ORF1ab	11868C>T	p.Thr3868Ile	View
T	C	14191	ORF1ab	14191T>C	p.Leu4643Leu	View
C	T	16092	ORF1ab	16092C>T	p.Tyr5276Tyr	View
G	A	29554	ORF10	29554G>A		View
T	C	9340	ORF1ab	9340T>C	p.Asn3025Asn	View
G	A	13313	ORF1ab	13313G>A	p.Val4350Ile	View
A	G	3094	ORF1ab	3094A>G	p.Pro943Pro	View
C	T	19145	ORF1ab	19145C>T	p.Ser6294Phe	View
C	T	25156	S	25156C>T	p.Ile1198Ile	View
T	C	12313	ORF1ab	12313T>C	p.Ala4016Ala	View
C	T	1701	ORF1ab	1701C>T	p.Ser479Phe	View
C	T	13436	ORF1ab	13436C>T	p.Leu4391Phe	View
C	G	17125	ORF1ab	17125C>G	p.Leu5621Val	View
C	T	18483	ORF1ab	18483C>T	p.His6073His	View
C	A	20031	ORF1ab	20031C>A	p.Ala6589Ala	View
G	T	20397	ORF1ab	20397G>T	p.Lys6711Asn	View
C	T	5833	ORF1ab	5833C>T	p.Ser1856Ser	View
T	C	19038	ORF1ab	19038T>C	p.Gly6258Gly	View
C	T	28896	N	28896C>T	p.Ala208Val	View
A	G	7429	ORF1ab	7429A>G	p.Ala2388Ala	View
C	T	17002	ORF1ab	17002C>T	p.Leu5580Phe	View
A	C	20379	ORF1ab	20379A>C	p.Gly6705Gly	View
C	T	6675	ORF1ab	6675C>T	p.Thr2137Ile	View
G	A	4067	ORF1ab	4067G>A	p.Ala1268Thr	View
C	T	15699	ORF1ab	15699C>T	p.Phe5145Phe	View
C	T	18557	ORF1ab	18557C>T	p.Thr6098Ile	View
G	A	2020	ORF1ab	2020G>A	p.Met585Ile	View
A	C	6597	ORF1ab	6597A>C	p.Asn2111Thr	View
A	G	9737	ORF1ab	9737A>G	p.Ser3158Gly	View
T	C	14619	ORF1ab	14619T>C	p.Thr4785Thr	View
C	A	25546	ORF3a	25546C>A	p.Leu52Ile	View
A	G	22102	S	22102A>G	p.Glu180Glu	View
G	A	20670	ORF1ab	20670G>A	p.Ala6802Ala	View
T	A	20928	ORF1ab	20928T>A	p.Pro6888Pro	View
G	C	3998	ORF1ab	3998G>C	p.Glu1245Gln	View
C	T	21811	S	21811C>T	p.Val83Val	View
C	T	110	ORF1ab	110C>T		View
C	A	11833	ORF1ab	11833C>A	p.Ala3856Ala	View
G	T	17280	ORF1ab	17280G>T	p.Val5672Val	View
G	A	27706	ORF7a	27706G>A	p.Ala105Thr	View
C	T	162	ORF1ab	162C>T		View
C	T	24616	S	24616C>T	p.Ile1018Ile	View
A	T	12293	ORF1ab	12293A>T	p.Thr4010Ser	View
A	G	1989	ORF1ab	1989A>G	p.Gln575Arg	View
T	C	17126	ORF1ab	17126T>C	p.Leu5621Pro	View
G	A	18433	ORF1ab	18433G>A	p.Asp6057Asn	View
G	A	25455	ORF3a	25455G>A	p.Lys21Lys	View
A	T	25608	ORF3a	25608A>T	p.Ala72Ala	View
C	T	1625	ORF1ab	1625C>T	p.Leu454Phe	View
A	T	24478	S	24478A>T	p.Ala972Ala	View
A	G	6707	ORF1ab	6707A>G	p.Lys2148Glu	View
G	A	17721	ORF1ab	17721G>A	p.Val5819Val	View
A	G	19116	ORF1ab	19116A>G	p.Lys6284Lys	View
C	T	22664	S	22664C>T	p.Leu368Leu	View
G	T	4913	ORF1ab	4913G>T	p.Val1550Phe	View
C	T	26150	ORF3a	26150C>T	p.Ser253Phe	View
GTTT	GTT	29587	ORF10	29587GTTT>GTT	p.Phe11fs	View
C	T	11776	ORF1ab	11776C>T	p.Ala3837Ala	View
A	T	22920	S	22920A>T	p.Tyr453Phe	View
C	T	25936	ORF3a	25936C>T	p.His182Tyr	View
C	A	6145	ORF1ab	6145C>A	p.Phe1960Leu	View
T	A	2201	ORF1ab	2201T>A	p.Trp646Arg	View
T	C	21346	ORF1ab	21346T>C	p.Phe7028Leu	View
G	A	8017	ORF1ab	8017G>A	p.Ala2584Ala	View
C	T	2462	ORF1ab	2462C>T	p.Leu733Leu	View
CT	C	8619	ORF1ab	8619CT>C	p.Ile2786fs	View
A	G	7102	ORF1ab	7102A>G	p.Ala2279Ala	View
G	T	6943	ORF1ab	6943G>T	p.Leu2226Leu	View
T	A	7226	ORF1ab	7226T>A	p.Phe2321Ile	View
A	G	26555	M	26555A>G	p.Glu11Glu	View
T	C	168	ORF1ab	168T>C		View
G	T	26620	M	26620G>T	p.Cys33Phe	View
T	C	27207	ORF6	27207T>C	p.Phe2Phe	View
C	T	5173	ORF1ab	5173C>T	p.His1636His	View
A	T	9433	ORF1ab	9433A>T	p.Val3056Val	View
G	A	10265	ORF1ab	10265G>A	p.Gly3334Ser	View
A	G	19650	ORF1ab	19650A>G	p.Val6462Val	View
G	A	21538	ORF1ab	21538G>A	p.Val7092Ile	View
T	C	15648	ORF1ab	15648T>C	p.Asp5128Asp	View
G	A	26140	ORF3a	26140G>A	p.Asp250Asn	View
C	T	1878	ORF1ab	1878C>T	p.Ser538Leu	View
G	A	6446	ORF1ab	6446G>A	p.Val2061Ile	View
C	T	6855	ORF1ab	6855C>T	p.Thr2197Ile	View
A	T	9848	ORF1ab	9848A>T	p.Ser3195Cys	View
A	G	13625	ORF1ab	13625A>G	p.Asp4454Gly	View
G	T	13765	ORF1ab	13765G>T	p.Asp4501Tyr	View
C	T	1101	ORF1ab	1101C>T	p.Ser279Phe	View
C	T	5934	ORF1ab	5934C>T	p.Thr1890Ile	View
G	T	18674	ORF1ab	18674G>T	p.Arg6137Ile	View
G	T	25740	ORF3a	25740G>T	p.Gln116His	View
C	G	24382	S	24382C>G	p.Ser940Ser	View
A	G	27860	ORF7b	27860A>G	p.Gln35Gln	View
G	T	3206	ORF1ab	3206G>T	p.Asp981Tyr	View
G	A	19879	ORF1ab	19879G>A	p.Asp6539Asn	View
C	T	27476	ORF7a	27476C>T	p.Thr28Ile	View
A	G	8810	ORF1ab	8810A>G	p.Lys2849Glu	View
C	T	21207	ORF1ab	21207C>T	p.Leu6981Leu	View
A	G	4659	ORF1ab	4659A>G	p.Tyr1465Cys	View
G	A	4371	ORF1ab	4371G>A	p.Gly1369Glu	View
C	A	17750	ORF1ab	17750C>A	p.Ala5829Asp	View
C	T	27549	ORF7a	27549C>T	p.Asn52Asn	View
G	T	1126	ORF1ab	1126G>T	p.Arg287Ser	View
G	A	805	ORF1ab	805G>A	p.Gly180Gly	View
T	C	11191	ORF1ab	11191T>C	p.Pro3642Pro	View
T	C	17784	ORF1ab	17784T>C	p.Asn5840Asn	View
T	C	18144	ORF1ab	18144T>C	p.Thr5960Thr	View
C	T	7039	ORF1ab	7039C>T	p.Gly2258Gly	View
A	G	17223	ORF1ab	17223A>G	p.Lys5653Lys	View
G	T	6877	ORF1ab	6877G>T	p.Lys2204Asn	View
T	C	20625	ORF1ab	20625T>C	p.Asp6787Asp	View
C	A	25797	ORF3a	25797C>A	p.Ser135Ser	View
C	T	18804	ORF1ab	18804C>T	p.Ser6180Ser	View

Download all variation (JSON)

Download all variation (CSV)

Funding and Acknowledgement

was done in partnership with the SMMU (Société Marocaine de Médecined'Urgence )

We sincerely thank all contributors around the world who have sequenced and shared their data about SARS-CoV-2 in the GISAID database. All data authors can be contacted directly via www.gisaid.org.

Abstract

Tutorial

All identified SNPs are listed in a table with linked to detailed information about each variation

Users can search variation by Amino Acid Mutation and its location in the specific gene

Users can search variation by Nucleic variation and its location in SARS-CoV-2 genome

SARS-CoV-2 most frequent Variations

Browse manually the Database.

was done in partnership with the SMMU (Société Marocaine de Médecined'Urgence )

We sincerely thank all contributors around the world who have sequenced and shared their data about SARS-CoV-2 in the GISAID database. All data authors can be contacted directly via www.gisaid.org.