SNP
SNP: ID001570
SNP (HGVS):
c.12946 T > C
Nucleotide in reference genome:
T - (Thymine)
Nucleotide in target genome:
C - (Cytosine)
Position in the genome:
12946
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Tyr4227Tyr
Gene
ORF1ab
Amino Acid Change:
Tyr - Y - tyrosine
Tyr - Y - tyrosine
Position in the gene
4227
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-09-22
Location : Asia - India
Strain-ID : hCoV-19IndiaTG-CCMB-AM7092020
Map:
Lineages and frequencies
variation observed in these lineages:
- G ( GISAID_clade ) Prevalence: 6.87%
- GK ( GISAID_clade ) Prevalence: 58.57%
- AY.33 ( pangolin_lineage ) Prevalence: 1.03%
- AY.30 ( pangolin_lineage ) Prevalence: 0.47%
- AY.15 ( pangolin_lineage ) Prevalence: 0.03%
- AY.13 ( pangolin_lineage ) Prevalence: 0.10%
- AY.37 ( pangolin_lineage ) Prevalence: 0.70%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- AY.16 ( pangolin_lineage ) Prevalence: 0.27%
- AY.14 ( pangolin_lineage ) Prevalence: 0.17%
- AY.11 ( pangolin_lineage ) Prevalence: 0.13%