SNP
SNP: ID003862
SNP (HGVS):
c.11230 G > T
Nucleotide in reference genome:
G - (Guanine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
11230
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Met3655Ile
Gene
ORF1ab
Amino Acid Change:
Met - M - methionine
Ile - I - isoleucine
Position in the gene
3655
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-01
Location : Africa - Zimbabwe
Strain-ID : hCoV-19ZimbabweZW-1682020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- S ( GISAID_clade ) Prevalence: 1.93%
- O ( GISAID_clade ) Prevalence: 1.90%
- A ( pangolin_lineage ) Prevalence: 0.40%
- A.23.1 ( pangolin_lineage ) Prevalence: 0.10%
- A.25 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%