SNP
SNP: ID001774
SNP (HGVS):
c.17154 T > C
Nucleotide in reference genome:
T - (Thymine)
Nucleotide in target genome:
C - (Cytosine)
Position in the genome:
17154
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Tyr5630Tyr
Gene
ORF1ab
Amino Acid Change:
Tyr - Y - tyrosine
Tyr - Y - tyrosine
Position in the gene
5630
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-04-26
Location : South America - Brazil
Strain-ID : hCoV-19BrazilSP-3012020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- GK ( GISAID_clade ) Prevalence: 58.57%
- B.1.1.10 ( pangolin_lineage ) Prevalence: 0.03%
- AY.4 ( pangolin_lineage ) Prevalence: 4.83%