SNP
SNP: ID001026
SNP (HGVS):
c.28086 G > T
Nucleotide in reference genome:
G - (Guanine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
28086
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF8 : p.Ala65Ser
Gene
ORF8
Amino Acid Change:
Ala - A - alanine
Ser - S - serine
Position in the gene
65
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-01-27
Location : Europe - France
Strain-ID : hCoV-19FranceARA-HCL0210205616012020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- G ( GISAID_clade ) Prevalence: 6.87%
- GR ( GISAID_clade ) Prevalence: 18.10%
- GH ( GISAID_clade ) Prevalence: 3.23%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%
- AY.4 ( pangolin_lineage ) Prevalence: 4.83%
- B.1.429 ( pangolin_lineage ) Prevalence: 0.13%
- AY.43 ( pangolin_lineage ) Prevalence: 2.60%
- AY.25 ( pangolin_lineage ) Prevalence: 2.50%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.1.351 ( pangolin_lineage ) Prevalence: 1.20%
- AY.44 ( pangolin_lineage ) Prevalence: 0.33%
- AY.24 ( pangolin_lineage ) Prevalence: 0.87%