SNP
SNP: ID002293
SNP (HGVS):
c.19964 T > C
Nucleotide in reference genome:
T - (Thymine)
Nucleotide in target genome:
C - (Cytosine)
Position in the genome:
19964
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Ile6567Thr
Gene
ORF1ab
Amino Acid Change:
Ile - I - isoleucine
Thr - T - threonine
Position in the gene
6567
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-11-19
Location : Asia - Japan
Strain-ID : hCoV-19JapanPG-198562020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- G ( GISAID_clade ) Prevalence: 6.87%
- AY.23 ( pangolin_lineage ) Prevalence: 1.50%
- B.1 ( pangolin_lineage ) Prevalence: 2.40%