SNP
SNP: ID001115
SNP (HGVS):
c.22323 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
22323
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
S : p.Ser254Phe
Gene
S
Amino Acid Change:
Ser - S - serine
Phe - F - phenylalanine
Position in the gene
254
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-01-27
Location : Asia - China
Strain-ID : hCoV-19PingxiangJX1512020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- AY.43 ( pangolin_lineage ) Prevalence: 2.60%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- AY.25 ( pangolin_lineage ) Prevalence: 2.50%