SNP
SNP: ID00785
SNP (HGVS):
c.17304 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
17304
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Val5680Val
Gene
ORF1ab
Amino Acid Change:
Val - V - valine
Val - V - valine
Position in the gene
5680
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-02-28
Location : North America - USA
Strain-ID : hCoV-19USAWA-S952020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GR ( GISAID_clade ) Prevalence: 18.10%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- AY.46 ( pangolin_lineage ) Prevalence: 0.30%
- P.1.17 ( pangolin_lineage ) Prevalence: 0.30%
- AY.43 ( pangolin_lineage ) Prevalence: 2.60%
- B.1.1.159 ( pangolin_lineage ) Prevalence: 0.03%