SNP
SNP: ID001908
SNP (HGVS):
c.100 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
100
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab :
Gene
ORF1ab
Amino Acid Change:
-
-
Position in the gene
0
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODIFIER
FIRST KNOW APPEARANCE
Date : 2020-02-29
Location : Europe - France
Strain-ID : hCoV-19FranceIDF_PSL_1372020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GR ( GISAID_clade ) Prevalence: 18.10%
- AY.27 ( pangolin_lineage ) Prevalence: 0.23%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%