SNP
SNP: ID001109
SNP (HGVS):
c.24928 G > T
Nucleotide in reference genome:
G - (Guanine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
24928
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
S : p.Val1122Val
Gene
S
Amino Acid Change:
Val - V - valine
Val - V - valine
Position in the gene
1122
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-03-09
Location : Europe - Spain
Strain-ID : hCoV-19SpainVC-FISABIO-142020
Map:
Lineages and frequencies
variation observed in these lineages:
- S ( GISAID_clade ) Prevalence: 1.93%
- GK ( GISAID_clade ) Prevalence: 58.57%
- A.21 ( pangolin_lineage ) Prevalence: 0.07%
- AY.20 ( pangolin_lineage ) Prevalence: 2.63%
- AY.5 ( pangolin_lineage ) Prevalence: 0.87%
- AY.40 ( pangolin_lineage ) Prevalence: 0.13%