SNP
SNP: ID00534
SNP (HGVS):
c.398 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
398
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.His45Tyr
Gene
ORF1ab
Amino Acid Change:
His - H - histidine
Tyr - Y - tyrosine
Position in the gene
45
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-01-24
Location : Asia - Malaysia
Strain-ID : hCoV-19MalaysiaMKAK-CL-2020-50452020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- GK ( GISAID_clade ) Prevalence: 58.57%
- B.1.1.284 ( pangolin_lineage ) Prevalence: 0.07%
- AY.4 ( pangolin_lineage ) Prevalence: 4.83%