SNP
SNP: ID004939
SNP (HGVS):
c.17126 T > C
Nucleotide in reference genome:
T - (Thymine)
Nucleotide in target genome:
C - (Cytosine)
Position in the genome:
17126
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Leu5621Pro
Gene
ORF1ab
Amino Acid Change:
Leu - L - leucine
Pro - P - proline
Position in the gene
5621
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-16
Location : Europe - Spain
Strain-ID : hCoV-19SpainVC-FISABIO-652020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%