SNP
SNP: ID004110
SNP (HGVS):
c.21110 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
21110
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Thr6949Ile
Gene
ORF1ab
Amino Acid Change:
Thr - T - threonine
Ile - I - isoleucine
Position in the gene
6949
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-02-24
Location : Europe - Italy
Strain-ID : hCoV-19ItalyTUS-C1982020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- GH ( GISAID_clade ) Prevalence: 3.23%
- GK ( GISAID_clade ) Prevalence: 58.57%
- B.1.351 ( pangolin_lineage ) Prevalence: 1.20%
- AY.4 ( pangolin_lineage ) Prevalence: 4.83%
- AZ.5 ( pangolin_lineage ) Prevalence: 0.30%
- P.1 ( pangolin_lineage ) Prevalence: 3.53%
- AY.34 ( pangolin_lineage ) Prevalence: 0.73%