SNP
SNP: ID003711
SNP (HGVS):
c.884 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
884
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Arg207Cys
Gene
ORF1ab
Amino Acid Change:
Arg - R - arginine
Cys - C - cysteine
Position in the gene
207
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-02-20
Location : Asia - Iran
Strain-ID : hCoV-19IranTehran-082020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- O ( GISAID_clade ) Prevalence: 1.90%
- GRY ( GISAID_clade ) Prevalence: 5.17%
- B.4 ( pangolin_lineage ) Prevalence: 0.23%
- AY.34 ( pangolin_lineage ) Prevalence: 0.73%
- B.4.7 ( pangolin_lineage ) Prevalence: 0.03%
- AY.39 ( pangolin_lineage ) Prevalence: 2.27%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%