SNP
SNP: ID00201
SNP (HGVS):
c.23593 G > C
Nucleotide in reference genome:
G - (Guanine)
Nucleotide in target genome:
C - (Cytosine)
Position in the genome:
23593
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
S : p.Gln677His
Gene
S
Amino Acid Change:
Gln - Q - glutamine
His - H - histidine
Position in the gene
677
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-04-06
Location : Asia - India
Strain-ID : hCoV-19IndiaMH-NIV-78302020
Map:
Lineages and frequencies
variation observed in these lineages:
- G ( GISAID_clade ) Prevalence: 6.87%
- GR ( GISAID_clade ) Prevalence: 18.10%
- GK ( GISAID_clade ) Prevalence: 58.57%
- AY.34 ( pangolin_lineage ) Prevalence: 0.73%
- P.1 ( pangolin_lineage ) Prevalence: 3.53%
- B.1.525 ( pangolin_lineage ) Prevalence: 0.50%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- R.2 ( pangolin_lineage ) Prevalence: 0.03%