SNP
SNP: ID001366
SNP (HGVS):
c.28849 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
28849
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
N : p.Asn192Asn
Gene
N
Amino Acid Change:
Asn - N - asparagine
Asn - N - asparagine
Position in the gene
192
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-02-01
Location : Asia - China
Strain-ID : hCoV-19ShanghaiSH00172020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GR ( GISAID_clade ) Prevalence: 18.10%
- G ( GISAID_clade ) Prevalence: 6.87%
- AY.4 ( pangolin_lineage ) Prevalence: 4.83%
- AY.39 ( pangolin_lineage ) Prevalence: 2.27%
- C.37 ( pangolin_lineage ) Prevalence: 1.03%
- B.1.35 ( pangolin_lineage ) Prevalence: 0.03%