SNP
SNP: ID002852
SNP (HGVS):
c.21721 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
21721
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
S : p.Asp53Asp
Gene
S
Amino Acid Change:
Asp - D - aspartic_acid
Asp - D - aspartic_acid
Position in the gene
53
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-03-11
Location : North America - Canada
Strain-ID : hCoV-19CanadaBC_55220392020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- GK ( GISAID_clade ) Prevalence: 58.57%
- GRY ( GISAID_clade ) Prevalence: 5.17%
- AY.4 ( pangolin_lineage ) Prevalence: 4.83%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%
- B.1.1.389 ( pangolin_lineage ) Prevalence: 0.03%
- AY.33 ( pangolin_lineage ) Prevalence: 1.03%