SNP
SNP: ID003620
SNP (HGVS):
c.29762 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
29762
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
S :
Gene
S
Amino Acid Change:
-
-
Position in the gene
0
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Structural
Predicted effect:
MODIFIER
FIRST KNOW APPEARANCE
Date : 2020-01-28
Location : Asia - China
Strain-ID : hCoV-19Shandong2020C12401262020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- G ( GISAID_clade ) Prevalence: 6.87%
- GK ( GISAID_clade ) Prevalence: 58.57%
- B.1.380 ( pangolin_lineage ) Prevalence: 0.17%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.1.1 ( pangolin_lineage ) Prevalence: 2.77%