SNP
SNP: ID001633
SNP (HGVS):
c.10632 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
10632
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Ala3456Val
Gene
ORF1ab
Amino Acid Change:
Ala - A - alanine
Val - V - valine
Position in the gene
3456
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-12
Location : North America - USA
Strain-ID : hCoV-19USAWA-UW2012020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- GH ( GISAID_clade ) Prevalence: 3.23%
- P.1 ( pangolin_lineage ) Prevalence: 3.53%
- B.1.351.2 ( pangolin_lineage ) Prevalence: 0.07%