SNP
SNP: ID002799
SNP (HGVS):
c.17883 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
17883
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Thr5873Thr
Gene
ORF1ab
Amino Acid Change:
Thr - T - threonine
Thr - T - threonine
Position in the gene
5873
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-03-24
Location : Asia - Japan
Strain-ID : hCoV-19JapanPG-16322020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- C.37 ( pangolin_lineage ) Prevalence: 1.03%