SNP
SNP: ID00430
SNP (HGVS):
c.16338 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
16338
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Val5358Val
Gene
ORF1ab
Amino Acid Change:
Val - V - valine
Val - V - valine
Position in the gene
5358
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-04-05
Location : Europe - United Kingdom
Strain-ID : hCoV-19ScotlandCVR16782020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- GV ( GISAID_clade ) Prevalence: 1.03%
- GK ( GISAID_clade ) Prevalence: 58.57%
- AY.27 ( pangolin_lineage ) Prevalence: 0.23%
- C.37 ( pangolin_lineage ) Prevalence: 1.03%