SNP
SNP: ID00327
SNP (HGVS):
c.29200 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
29200
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
N : p.Pro309Pro
Gene
N
Amino Acid Change:
Pro - P - proline
Pro - P - proline
Position in the gene
309
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-01-21
Location : Asia - China
Strain-ID : hCoV-19ChongqingYC012020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- G ( GISAID_clade ) Prevalence: 6.87%
- AY.39 ( pangolin_lineage ) Prevalence: 2.27%
- AY.25 ( pangolin_lineage ) Prevalence: 2.50%
- B.1.35 ( pangolin_lineage ) Prevalence: 0.03%