SNP
SNP: ID003960
SNP (HGVS):
c.1800 C > A
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
A - (Adenine)
Position in the genome:
1800
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Thr512Lys
Gene
ORF1ab
Amino Acid Change:
Thr - T - threonine
Lys - K - lysine
Position in the gene
512
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-06-11
Location : Europe - United Kingdom
Strain-ID : hCoV-19EnglandALDP-94A1772020
Map:
Lineages and frequencies
variation observed in these lineages:
- S ( GISAID_clade ) Prevalence: 1.93%
- A.2.5.1 ( pangolin_lineage ) Prevalence: 0.03%