SNP
SNP: ID001686
SNP (HGVS):
c.12025 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
12025
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Ser3920Ser
Gene
ORF1ab
Amino Acid Change:
Ser - S - serine
Ser - S - serine
Position in the gene
3920
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-03-21
Location : Europe - United Kingdom
Strain-ID : hCoV-19EnglandPORT-2D208D2020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GR ( GISAID_clade ) Prevalence: 18.10%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%