SNP
SNP: ID003974
SNP (HGVS):
c.21800 G > T
Nucleotide in reference genome:
G - (Guanine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
21800
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
S : p.Asp80Tyr
Gene
S
Amino Acid Change:
Asp - D - aspartic_acid
Tyr - Y - tyrosine
Position in the gene
80
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-16
Location : Europe - United Kingdom
Strain-ID : hCoV-19EnglandCAMB-74C212020
Map:
Lineages and frequencies
variation observed in these lineages:
- S ( GISAID_clade ) Prevalence: 1.93%
- G ( GISAID_clade ) Prevalence: 6.87%
- GR ( GISAID_clade ) Prevalence: 18.10%
- GK ( GISAID_clade ) Prevalence: 58.57%
- O ( GISAID_clade ) Prevalence: 1.90%
- B.1.380 ( pangolin_lineage ) Prevalence: 0.17%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- C.36 ( pangolin_lineage ) Prevalence: 0.13%
- AY.33 ( pangolin_lineage ) Prevalence: 1.03%
- AZ.5 ( pangolin_lineage ) Prevalence: 0.30%
- B.1.1.404 ( pangolin_lineage ) Prevalence: 0.07%
- A.2.5 ( pangolin_lineage ) Prevalence: 0.57%
- B.1.524 ( pangolin_lineage ) Prevalence: 0.10%