SNP
SNP: ID003518
SNP (HGVS):
c.25767 G > T
Nucleotide in reference genome:
G - (Guanine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
25767
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF3a : p.Met125Ile
Gene
ORF3a
Amino Acid Change:
Met - M - methionine
Ile - I - isoleucine
Position in the gene
125
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-02-02
Location : Asia - China
Strain-ID : hCoV-19ShanghaiSH00212020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GR ( GISAID_clade ) Prevalence: 18.10%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%