SNP
SNP: ID001117
SNP (HGVS):
c.27600 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
27600
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF7a : p.Asp69Asp
Gene
ORF7a
Amino Acid Change:
Asp - D - aspartic_acid
Asp - D - aspartic_acid
Position in the gene
69
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-03-16
Location : Europe - United Kingdom
Strain-ID : hCoV-19ScotlandCVR1322020
Map:
Lineages and frequencies
variation observed in these lineages:
- G ( GISAID_clade ) Prevalence: 6.87%
- GK ( GISAID_clade ) Prevalence: 58.57%
- B.1.628 ( pangolin_lineage ) Prevalence: 0.20%
- AY.47 ( pangolin_lineage ) Prevalence: 0.27%