SNP
SNP: ID001348
SNP (HGVS):
c.28606 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
28606
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
N : p.Tyr111Tyr
Gene
N
Amino Acid Change:
Tyr - Y - tyrosine
Tyr - Y - tyrosine
Position in the gene
111
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-01-29
Location : Asia - India
Strain-ID : hCoV-19IndiaMH-NCCS-1722472020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GH ( GISAID_clade ) Prevalence: 3.23%
- AY.25 ( pangolin_lineage ) Prevalence: 2.50%
- B.1.497 ( pangolin_lineage ) Prevalence: 0.03%