SNP
SNP: ID0073
SNP (HGVS):
c.1263 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
1263
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Thr333Met
Gene
ORF1ab
Amino Acid Change:
Thr - T - threonine
Met - M - methionine
Position in the gene
333
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-16
Location : Europe - Denmark
Strain-ID : hCoV-19DenmarkALAB-HH832020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GH ( GISAID_clade ) Prevalence: 3.23%
- B.1.351 ( pangolin_lineage ) Prevalence: 1.20%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- AY.23.1 ( pangolin_lineage ) Prevalence: 0.13%
- AY.23 ( pangolin_lineage ) Prevalence: 1.50%