SNP
SNP: ID002418
SNP (HGVS):
c.27625 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
27625
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF7a : p.Arg78Cys
Gene
ORF7a
Amino Acid Change:
Arg - R - arginine
Cys - C - cysteine
Position in the gene
78
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-14
Location : Europe - Germany
Strain-ID : hCoV-19GermanyNW-UKB-091602020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GRY ( GISAID_clade ) Prevalence: 5.17%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- AY.3 ( pangolin_lineage ) Prevalence: 1.30%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%