SNP
SNP: ID00550
SNP (HGVS):
c.29645 G > T
Nucleotide in reference genome:
G - (Guanine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
29645
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF10 : p.Val30Leu
Gene
ORF10
Amino Acid Change:
Val - V - valine
Leu - L - leucine
Position in the gene
30
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-02-15
Location : Europe - Netherlands
Strain-ID : hCoV-19NetherlandsZH-EMC-20792020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GV ( GISAID_clade ) Prevalence: 1.03%
- B.1.177.54 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.1.177.51 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.177.4 ( pangolin_lineage ) Prevalence: 0.07%
- B.1.177.57 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.177.60 ( pangolin_lineage ) Prevalence: 0.13%
- W.1 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.177.45 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.177.75 ( pangolin_lineage ) Prevalence: 0.03%
- AY.37 ( pangolin_lineage ) Prevalence: 0.70%
- B.1.177.44 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.177.20 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.177 ( pangolin_lineage ) Prevalence: 0.23%
- B.1.177.81 ( pangolin_lineage ) Prevalence: 0.07%
- AY.46.6 ( pangolin_lineage ) Prevalence: 0.20%