SNP
SNP: ID003887
SNP (HGVS):
c.25621 G > T
Nucleotide in reference genome:
G - (Guanine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
25621
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF3a : p.Val77Phe
Gene
ORF3a
Amino Acid Change:
Val - V - valine
Phe - F - phenylalanine
Position in the gene
77
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-02-06
Location : Asia - China
Strain-ID : hCoV-19Shandong2020C12403122020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GV ( GISAID_clade ) Prevalence: 1.03%
- AY.4 ( pangolin_lineage ) Prevalence: 4.83%
- B.1.177.60 ( pangolin_lineage ) Prevalence: 0.13%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%