SNP
SNP: ID004486
SNP (HGVS):
c.27690 A > T
Nucleotide in reference genome:
A - (Adenine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
27690
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF7a : p.Pro99Pro
Gene
ORF7a
Amino Acid Change:
Pro - P - proline
Pro - P - proline
Position in the gene
99
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-02-04
Location : Asia - China
Strain-ID : hCoV-19ShanghaiSH00362020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- AY.46.6 ( pangolin_lineage ) Prevalence: 0.20%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%