SNP
SNP: ID0071
SNP (HGVS):
c.18417 T > C
Nucleotide in reference genome:
T - (Thymine)
Nucleotide in target genome:
C - (Cytosine)
Position in the genome:
18417
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Asp6051Asp
Gene
ORF1ab
Amino Acid Change:
Asp - D - aspartic_acid
Asp - D - aspartic_acid
Position in the gene
6051
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-03-16
Location : Europe - Netherlands
Strain-ID : hCoV-19NetherlandsNA_6152020
Map:
Lineages and frequencies
variation observed in these lineages:
- S ( GISAID_clade ) Prevalence: 1.93%
- O ( GISAID_clade ) Prevalence: 1.90%
- GR ( GISAID_clade ) Prevalence: 18.10%
- B.1.1.318 ( pangolin_lineage ) Prevalence: 0.37%
- A.2.4 ( pangolin_lineage ) Prevalence: 0.10%
- A.2.5.2 ( pangolin_lineage ) Prevalence: 0.03%
- A.2.5 ( pangolin_lineage ) Prevalence: 0.57%
- A.2.5.3 ( pangolin_lineage ) Prevalence: 0.07%
- A.2.5.1 ( pangolin_lineage ) Prevalence: 0.03%