SNP
SNP: ID002932
SNP (HGVS):
c.7926 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
7926
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Ala2554Val
Gene
ORF1ab
Amino Acid Change:
Ala - A - alanine
Val - V - valine
Position in the gene
2554
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-09
Location : South America - Brazil
Strain-ID : hCoV-19BrazilSP-BT67132020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- GV ( GISAID_clade ) Prevalence: 1.03%
- GK ( GISAID_clade ) Prevalence: 58.57%
- G ( GISAID_clade ) Prevalence: 6.87%
- O ( GISAID_clade ) Prevalence: 1.90%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.1.1 ( pangolin_lineage ) Prevalence: 2.77%
- P.1 ( pangolin_lineage ) Prevalence: 3.53%
- B.1.177.57 ( pangolin_lineage ) Prevalence: 0.03%
- AY.10 ( pangolin_lineage ) Prevalence: 0.20%
- AY.26 ( pangolin_lineage ) Prevalence: 1.10%
- B.1.1.274 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.628 ( pangolin_lineage ) Prevalence: 0.20%
- AY.44 ( pangolin_lineage ) Prevalence: 0.33%