SNP
SNP: ID002494
SNP (HGVS):
c.29451 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
29451
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
N : p.Thr393Ile
Gene
N
Amino Acid Change:
Thr - T - threonine
Ile - I - isoleucine
Position in the gene
393
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-11
Location : North America - USA
Strain-ID : hCoV-19USAMS-CDC-65682020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- G ( GISAID_clade ) Prevalence: 6.87%
- AY.4 ( pangolin_lineage ) Prevalence: 4.83%
- AY.39 ( pangolin_lineage ) Prevalence: 2.27%