SNP
SNP: ID00912
SNP (HGVS):
c.25350 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
25350
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
S : p.Pro1263Leu
Gene
S
Amino Acid Change:
Pro - P - proline
Leu - L - leucine
Position in the gene
1263
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-01-20
Location : Asia - China
Strain-ID : hCoV-19HenanIVDC-HeN-0022020
Map:
Lineages and frequencies
variation observed in these lineages:
- S ( GISAID_clade ) Prevalence: 1.93%
- GK ( GISAID_clade ) Prevalence: 58.57%
- G ( GISAID_clade ) Prevalence: 6.87%
- B.1.525 ( pangolin_lineage ) Prevalence: 0.50%
- AY.6 ( pangolin_lineage ) Prevalence: 0.13%
- A.2.5 ( pangolin_lineage ) Prevalence: 0.57%
- B.1.628 ( pangolin_lineage ) Prevalence: 0.20%
- AY.16 ( pangolin_lineage ) Prevalence: 0.27%