SNP
SNP: ID001166
SNP (HGVS):
c.4276 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
4276
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Tyr1337Tyr
Gene
ORF1ab
Amino Acid Change:
Tyr - Y - tyrosine
Tyr - Y - tyrosine
Position in the gene
1337
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-03-16
Location : Europe - Iceland
Strain-ID : hCoV-19Iceland2352020
Map:
Lineages and frequencies
variation observed in these lineages:
- G ( GISAID_clade ) Prevalence: 6.87%
- GK ( GISAID_clade ) Prevalence: 58.57%
- GR ( GISAID_clade ) Prevalence: 18.10%
- AY.4 ( pangolin_lineage ) Prevalence: 4.83%
- B.1.23 ( pangolin_lineage ) Prevalence: 0.07%
- AY.21 ( pangolin_lineage ) Prevalence: 0.03%
- AY.43 ( pangolin_lineage ) Prevalence: 2.60%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- C.37 ( pangolin_lineage ) Prevalence: 1.03%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%