SNP
SNP: ID002281
SNP (HGVS):
c.25572 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
25572
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF3a : p.Ser60Ser
Gene
ORF3a
Amino Acid Change:
Ser - S - serine
Ser - S - serine
Position in the gene
60
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-03-11
Location : Europe - United Kingdom
Strain-ID : hCoV-19England2011606232020
Map:
Lineages and frequencies
variation observed in these lineages:
- GR ( GISAID_clade ) Prevalence: 18.10%
- GK ( GISAID_clade ) Prevalence: 58.57%
- O ( GISAID_clade ) Prevalence: 1.90%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.35 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.1 ( pangolin_lineage ) Prevalence: 2.77%