SNP
SNP: ID00929
SNP (HGVS):
c.3817 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
3817
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Asp1184Asp
Gene
ORF1ab
Amino Acid Change:
Asp - D - aspartic_acid
Asp - D - aspartic_acid
Position in the gene
1184
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-02-13
Location : Asia - China
Strain-ID : hCoV-19GuangdongMZ012020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GR ( GISAID_clade ) Prevalence: 18.10%
- GRY ( GISAID_clade ) Prevalence: 5.17%
- C.35 ( pangolin_lineage ) Prevalence: 0.17%
- AY.25 ( pangolin_lineage ) Prevalence: 2.50%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- AY.20 ( pangolin_lineage ) Prevalence: 2.63%