SNP
SNP: ID001227
SNP (HGVS):
c.13482 A > G
Nucleotide in reference genome:
A - (Adenine)
Nucleotide in target genome:
G - (Guanine)
Position in the genome:
13482
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Ter4406Ter
Gene
ORF1ab
Amino Acid Change:
Ter -
Ter -
Position in the gene
4406
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-07-23
Location : North America - USA
Strain-ID : hCoV-19USACA-CZB-39132020
Map:
Lineages and frequencies
variation observed in these lineages:
- G ( GISAID_clade ) Prevalence: 6.87%
- GK ( GISAID_clade ) Prevalence: 58.57%
- AY.30 ( pangolin_lineage ) Prevalence: 0.47%
- AY.39.1.1 ( pangolin_lineage ) Prevalence: 0.03%
- AY.39.1 ( pangolin_lineage ) Prevalence: 3.03%
- AY.37 ( pangolin_lineage ) Prevalence: 0.70%