SNP
SNP: ID002984
SNP (HGVS):
c.6997 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
6997
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Ile2244Ile
Gene
ORF1ab
Amino Acid Change:
Ile - I - isoleucine
Ile - I - isoleucine
Position in the gene
2244
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-04-13
Location : North America - USA
Strain-ID : hCoV-19USANY-NYUMC3902020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GRY ( GISAID_clade ) Prevalence: 5.17%
- O ( GISAID_clade ) Prevalence: 1.90%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%
- B.6 ( pangolin_lineage ) Prevalence: 0.40%
- AY.37 ( pangolin_lineage ) Prevalence: 0.70%