SNP
SNP: ID001843
SNP (HGVS):
c.8626 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
8626
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Phe2787Phe
Gene
ORF1ab
Amino Acid Change:
Phe - F - phenylalanine
Phe - F - phenylalanine
Position in the gene
2787
Position in the gene
Synonymous / Non-Synonymous:
Synonymous
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
LOW
FIRST KNOW APPEARANCE
Date : 2020-03-01
Location : Asia - Japan
Strain-ID : hCoV-19JapanFHU-CS56-03012020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- AY.3 ( pangolin_lineage ) Prevalence: 1.30%
- AY.33 ( pangolin_lineage ) Prevalence: 1.03%