SNP
SNP: ID001248
SNP (HGVS):
c.5011 A > C
Nucleotide in reference genome:
A - (Adenine)
Nucleotide in target genome:
C - (Cytosine)
Position in the genome:
5011
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Gln1582His
Gene
ORF1ab
Amino Acid Change:
Gln - Q - glutamine
His - H - histidine
Position in the gene
1582
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-02-18
Location : North America - USA
Strain-ID : hCoV-19USATX-CDC-4061563-0012020
Map:
Lineages and frequencies
variation observed in these lineages:
- GH ( GISAID_clade ) Prevalence: 3.23%
- B.1.311 ( pangolin_lineage ) Prevalence: 0.03%