SNP
SNP: ID001287
SNP (HGVS):
c.2232 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
2232
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Ala656Val
Gene
ORF1ab
Amino Acid Change:
Ala - A - alanine
Val - V - valine
Position in the gene
656
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-15
Location : Europe - Spain
Strain-ID : hCoV-19SpainVC-IBV-980031032020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- GR ( GISAID_clade ) Prevalence: 18.10%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- AY.24 ( pangolin_lineage ) Prevalence: 0.87%