SNP
SNP: ID001136
SNP (HGVS):
c.12533 A > G
Nucleotide in reference genome:
A - (Adenine)
Nucleotide in target genome:
G - (Guanine)
Position in the genome:
12533
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Thr4090Ala
Gene
ORF1ab
Amino Acid Change:
Thr - T - threonine
Ala - A - alanine
Position in the gene
4090
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-24
Location : Europe - United Kingdom
Strain-ID : hCoV-19EnglandLIVE-A9A1A2020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%