SNP
SNP: ID00811
SNP (HGVS):
c.5907 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
5907
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Thr1881Ile
Gene
ORF1ab
Amino Acid Change:
Thr - T - threonine
Ile - I - isoleucine
Position in the gene
1881
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-23
Location : Europe - Austria
Strain-ID : hCoV-19AustriaCeMM05092020
Map:
Lineages and frequencies
variation observed in these lineages:
- GRY ( GISAID_clade ) Prevalence: 5.17%
- GR ( GISAID_clade ) Prevalence: 18.10%
- GK ( GISAID_clade ) Prevalence: 58.57%
- S ( GISAID_clade ) Prevalence: 1.93%
- AY.25 ( pangolin_lineage ) Prevalence: 2.50%
- B.1.1.7 ( pangolin_lineage ) Prevalence: 8.40%
- AY.33 ( pangolin_lineage ) Prevalence: 1.03%
- AY.39.1 ( pangolin_lineage ) Prevalence: 3.03%
- A.21 ( pangolin_lineage ) Prevalence: 0.07%