SNP
SNP: ID001526
SNP (HGVS):
c.29274 C > T
Nucleotide in reference genome:
C - (Cytosine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
29274
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
N : p.Thr334Ile
Gene
N
Amino Acid Change:
Thr - T - threonine
Ile - I - isoleucine
Position in the gene
334
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-04-03
Location : Europe - Portugal
Strain-ID : hCoV-19PortugalPT05492020
Map:
Lineages and frequencies
variation observed in these lineages:
- GK ( GISAID_clade ) Prevalence: 58.57%
- V ( GISAID_clade ) Prevalence: 0.37%
- AY.4.5 ( pangolin_lineage ) Prevalence: 0.37%
- B.31 ( pangolin_lineage ) Prevalence: 0.07%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%