SNP
SNP: ID003624
SNP (HGVS):
c.12191 G > T
Nucleotide in reference genome:
G - (Guanine)
Nucleotide in target genome:
T - (Thymine)
Position in the genome:
12191
SARS-CoV-2 genes
Annotation
Amino Acid Mutation (HGVS):
ORF1ab : p.Val3976Phe
Gene
ORF1ab
Amino Acid Change:
Val - V - valine
Phe - F - phenylalanine
Position in the gene
3976
Position in the gene
Synonymous / Non-Synonymous:
Missense
Structural / Non-Structural Protein:
Non-Structural
Predicted effect:
MODERATE
FIRST KNOW APPEARANCE
Date : 2020-03-16
Location : North America - Guadeloupe
Strain-ID : hCoV-19GuadeloupeIPG-73302020
Map:
Lineages and frequencies
variation observed in these lineages:
- G ( GISAID_clade ) Prevalence: 6.87%
- GR ( GISAID_clade ) Prevalence: 18.10%
- GK ( GISAID_clade ) Prevalence: 58.57%
- B.1.1.218 ( pangolin_lineage ) Prevalence: 0.03%
- B.1.617.2 ( pangolin_lineage ) Prevalence: 27.27%
- B.1 ( pangolin_lineage ) Prevalence: 2.40%